Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans pH-sensitive chloride channel 2


LOCUS       XM_013248293            1862 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106084542), mRNA.
ACCESSION   XM_013248293
VERSION     XM_013248293.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248293.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1862
                     /gene="LOC106084542"
                     /note="pH-sensitive chloride channel 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:106084542"
     CDS             97..1764
                     /gene="LOC106084542"
                     /codon_start=1
                     /product="pH-sensitive chloride channel 2"
                     /protein_id="XP_013103747.2"
                     /db_xref="GeneID:106084542"
                     /translation="MNPQSIAVKVVLYSLAIAFTVTNNAYGQNLADGKSALDETLLAL
                     ASEGVDESVGLKKNVENLHVAVSGTVNKMSVNDTSYAISTDLNVTKSADEKCRSLEDA
                     AHLTQTQLINRLTATCRYDRLERPYVVANGTIVNSPLDVYARVYIYVLQNLDSSDLQF
                     KMHGLLQLRFQDPRLAFDKYAPGRTKSILGESSLRDVIWVPHIFLANEHDSSVLGTSE
                     KDVLTSISPNGTVIISSRIQATLYCWMKLQKFPFDEQYCPTIFESWMYNASELLLHWE
                     QNAPVTFDPKMHLTEYALANAWTNETIINADLDDLRHGAFAGNYSSLGFTVHLVREVG
                     YYVMDYFLPSIMIVAISWVSFWLQADQTPARTTLGCTTMLSFITLASSQENNLPKVSY
                     IKVSEVWFLGCTVFIFGSLVEFAFVNTIWRRNHSVEVKKLKSKYILKSTLTPRMKRHK
                     MVDNAKQPERSNSERYLSVDTPSPVIITVGDDPMNRFTSSESIATMTTSLADNESERE
                     KKPVENTSWSTMTPHEVSLWIDRKARFLFPIAFIIFNAFFWTFVYCL"
ORIGIN      
        1 aatttttaaa acaaacgatc gcggcggagc gaacataacg agcacacaga aagtgttttt
       61 ggtgtgtagc aaatatcatc ataaggacga taaataatga atccacaatc gatcgcagtt
      121 aaggttgtgt tatactctct cgcaatcgcc ttcacagtaa cgaacaatgc ttacggtcag
      181 aatttagccg acggtaaatc tgcgttagac gaaactcttt tggccctggc ctcagaagga
      241 gtagacgaat cggtgggatt gaagaaaaat gttgaaaatt tacatgtggc cgtgtcggga
      301 acggtgaaca aaatgtcagt gaatgacact tcctatgcca tatcgacgga tttgaatgtg
      361 accaaaagtg cggatgagaa atgtcgctcg ctggaagatg ctgcgcattt gacccagacc
      421 caattgataa accgtttgac ggcgacctgc cgctacgatc gcctggagcg accttacgta
      481 gtggcaaatg gcacaattgt caactcgcct ctggatgtct atgccagggt ctatatttac
      541 gttttacaaa acttggactc cagtgacctg cagttcaaaa tgcatggctt gctgcagttg
      601 cgtttccagg atccccgact tgccttcgat aagtatgccc ctggcaggac aaaatcaatt
      661 ctgggagaat cctcgctgcg tgatgtcatt tgggtgccgc acatatttct ggccaatgaa
      721 catgactcca gtgtgctggg caccagcgaa aaggatgtgc tcacctccat tagccccaat
      781 ggcaccgtca tcatttcctc acgcatacaa gctaccctgt attgctggat gaagctacaa
      841 aagtttccct ttgacgaaca gtattgtccc accattttcg aaagctggat gtacaatgcc
      901 tcggagctgc tgttgcattg ggagcaaaat gccccggtta cctttgatcc caaaatgcat
      961 ttgaccgaat atgccctggc aaatgcctgg accaatgaga caataatcaa tgcggatttg
     1021 gatgatttga ggcatggagc ctttgcaggc aactacagtt ctttgggctt tacagttcac
     1081 ttggtgcgag aagttggcta ttatgtcatg gactactttt tgccttcgat tatgatagtg
     1141 gccatatcct gggtatcctt ttggttgcag gccgatcaga cacctgcccg aaccaccttg
     1201 ggctgtacca ccatgttgtc tttcataaca ttggcatcct cgcaggagaa taatctgccc
     1261 aaagtcagtt acatcaaggt ttcggaagta tggtttctgg gctgcacagt cttcatattt
     1321 ggcagtttgg tggaatttgc ctttgtcaat accatatggc gaagaaatca cagtgtcgaa
     1381 gtgaaaaagt tgaagagtaa atacatcctg aagtcaacgc tgacgccacg catgaaacgc
     1441 cacaaaatgg tggacaatgc taaacaacca gaacgaagta acagtgaacg ttatttgtca
     1501 gtggatactc cctcaccggt catcattacc gtgggcgatg atcccatgaa tagatttacc
     1561 tcttccgagt ctattgccac catgaccacc agtttagcgg ataacgagag tgaacgagag
     1621 aaaaaaccgg ttgaaaacac atcctggtcc acgatgacac cacacgaggt gtccttgtgg
     1681 atagatagga aagctcgctt tttgtttccc atagccttta taattttcaa tgcattcttt
     1741 tggacttttg tctactgttt gtgataatca aaaaaaattt ttatggaaat ttagaaaaga
     1801 aaaaataaat gtacaaaagt gtatgagaat tatctaagtt aagccaacat gttggagggt
     1861 tt