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LOCUS XM_013248281 3723 bp mRNA linear INV 02-SEP-2023 (LOC106084536), transcript variant X5, mRNA. ACCESSION XM_013248281 VERSION XM_013248281.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248281.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3723 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3723 /gene="LOC106084536" /note="inhibitory POU protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084536" CDS 1030..2106 /gene="LOC106084536" /codon_start=1 /product="inhibitory POU protein isoform X4" /protein_id="XP_013103735.1" /db_xref="GeneID:106084536" /translation="MTMSMYSSTDKMKMSAPSCFPGRYSPSYRSSEQMRRCMPNPSGD IFAGINDGILSRAEALSAIDIGKHQASHVHPSQMTSQMKHDVMYHHHSMGGPPQRPLQ MHHSMDQLDMLDPTGSMTTLAPISETPLTPTHQHLHGSYHSMNHMMTHHHPSGLGGHS TGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP SVLPAGEKKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR QKQKRIVSSVTPSMTGHGSTGFGY" misc_feature 1585..1818 /gene="LOC106084536" /note="Found in Pit-Oct-Unc transcription factors; Region: POU; smart00352" /db_xref="CDD:197673" misc_feature 1879..2046 /gene="LOC106084536" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" polyA_site 3723 /gene="LOC106084536" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgaaatctg ttcgggtccg tttagtttaa acaatagcag cagatacaga tacagataga 61 tatctacact tacttacact tactgtctgc ctctgcttgt tcttgttgtt gttcttcttc 121 ttctacttcg tcttcatgtt cttggcaagg caaggcgact cactcgtggg ccaaatcctt 181 ctcgagatac aataattata cccataacag tgcgtgtttg ttatccaagc ggccgacgac 241 tacgacgacc accaccagac caacaaacca accaaccaac cgaccgaccg aacagccagc 301 cacgcaggca gtcaagtcag tcagccagcc aacgaagcag ccaaacaacc tactttataa 361 tttatcaagc ttatttgtga ttcatagtta gcattcgtta tttcattatc aattgtgatc 421 aattttataa ttaaagtttc atatctggtg gcggcggcga cggtaaacga atgatttgca 481 tatcccatac agctagccag ccaaccagcc agccagcata ccaacaacat actacaactg 541 catcccaaaa tcctaaggga aagtgaagaa aatttataaa acaaatacta aagatccaag 601 gatatatagg ggccgaatcc atttcacctc ccccccctcc cccatactca caagaagtgt 661 tgttgcgtcc gttaattgtg cattaataaa tttaagaaat atagagaaaa aaatcgcaaa 721 cgcgagtgtg tgtgtcagtg agtgcgttct agagtgccaa cgcttaatcc atataccata 781 gcaaacaaaa tagcaaagga tatcgctgga gaaaataaat caacaaaaga agaaaagcaa 841 agaatttaaa ttggcctttc caggggccca acgcaaaaga tttcgaaaat ttgttaattt 901 gtgttgtcct gcttgttgta agcaggattt gtgcttgaaa ttgtttaaaa gtgcttcaaa 961 atttactctc caacgacttt tgacgcctcc agggcgttca aactagaaga agatttcgtg 1021 ggaggctgca tgaccatgtc gatgtactca tcgacggata aaatgaaaat gtcggcgccc 1081 agttgttttc ccggtcgcta cagtccttcc tatcgaagtt ccgagcaaat gaggcgctgc 1141 atgccaaatc cttcgggcga tatatttgct ggaatcaatg atggcatact cagcagagcg 1201 gaagcgctgt ctgcgataga cataggaaag catcaagcgt ctcatgtaca tccctcgcaa 1261 atgacctccc aaatgaagca tgatgtaatg tatcatcatc acagtatggg aggtcctccg 1321 caaaggccac tgcagatgca tcactcaatg gaccagttag atatgctgga tccaacgggt 1381 tcgatgacaa cgctagcccc catttcagaa acgcctttaa cacctacgca ccagcattta 1441 catggatcct accacagtat gaaccacatg atgacgcatc atcatccgag tggtttaggt 1501 ggacactcaa cgggtcatca tggtcattct gcggtacatc atcctgtgat aacagcggca 1561 gttgctgcgg cgggtctaca tccggacacc gatacagatc ctagagaact cgaggcgttt 1621 gcggagagat ttaaacaaag aagaataaaa ttaggagtca cacaagccga tgtcggaaaa 1681 gcactagcga atttaaagtt acctggagtt ggggcgctct ctcaaagtac aatatgtcga 1741 tttgaaagtc tcacactgtc tcacaataac atgattgccc tgaagcccat tctgcaggcg 1801 tggctggagg aagcggaggc tcaggcgaaa aacaaacgac gagatcctga tgcccccagt 1861 gtactgcctg ccggcgaaaa gaaaaggact tccattgcgg cacctgaaaa gcgatctttg 1921 gaagcgtatt ttgccgttca accgagacca tctggtgaga agatagctgc cattgccgag 1981 aagctggacc tgaagaagaa tgtggtgcga gtatggttct gtaatcagag acaaaaacaa 2041 aaacgtatag ttagcagcgt tacaccctcg atgactggac acggatcaac ggggtttggt 2101 tactgatagc cgatgtttcc cggagaccac tacatgtaga ttgcctcccc caccacggat 2161 cacaccgaac accaaagccc cagccccaag atgtggacgt ggacgtgaac agaccccaac 2221 accccatgat gaccatgaag atgaccaaat gcgagcgagc accaatccaa attcaaatcg 2281 atcatcgacc ccttcatggc tgcacactct acatgatgcc aacaatcaaa tgcgattata 2341 tatggaacga tcaatgcaaa caatggacca acatatcaaa tgcaataaca ttacaactaa 2401 tgatacattt ttaaaaccgg gaactacgac attgatgtgt atagtcaaat ttattatgta 2461 tgcctttcgg agaccttcaa ggacatctgg aatacctttt aagttttttt atttttgttt 2521 ttattttagt aattgcaatg tcgtagtctc tatgcttcct ttagagtact acacacaaaa 2581 acactcacac acacacacac tcacacacat atacaagcca cttatctgaa atgaaaatcc 2641 atacttcaaa catgcagact aataaaaaca aaaaaggaaa acaaaataca taaagtcacc 2701 tatctgcact gaaggctgcc gccttccccc acccccacaa aaaggataag attttccttg 2761 gaactggtga acgatggaac ttcaaaaacg aaagcagcac tcaagcactc ggaaatgcaa 2821 cgaatttaac ctgttgccaa actataagta taacaattaa ttattaatat aattataaca 2881 aaaaaaaaac agacaaagag gactatagag gaaggcgtta acagtgataa gaagaagaag 2941 aagacgaaga aaaatatgct gacgttgacg caaatgctgt tattgatgaa atgatcctgt 3001 cgtggacggt caggatgatt ttcaataaag atttttacaa aatactccta agactataga 3061 gatgtacaga tttaactaga tttacaacca aacgaaaaac aaaatggcga aaactaaact 3121 actatttgaa tatgtatgta aatattccta tacataaaga caacgtacta catacataca 3181 tgcataacta tgtatagaag catatacata catataaaac tatgtatgtg ctatattctt 3241 tatacataac aaaaaaaaaa gaaaaaaaca aaaacaaata aataacagca acagaagaaa 3301 aagaaacaaa gccattagaa agagaaaaaa aacaaaacca agaaaatacc aacagagaaa 3361 attatattat aaataattaa tatttaaata ataaaacgaa aagtgaaata aaaaacaaaa 3421 aaaaaacatt tcatagattt acttttaagt agttttgtat ctacataagt agcaataaat 3481 tttaataccc ccatgcagtt ttacttttat tccaataacg agtatccttt tccatctctt 3541 tttaattatt atatctgtaa atatgtaatt tgcaaaatga aactaaaaac aacaacaaca 3601 acaacaaaag aaaccaaatt aaaaacgaat aaaacattat cttgttaatt tcaattcatt 3661 actaactgta gatgtactat taccgaatgt agcggataat aaagtcagtc tagttgaaaa 3721 taa