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LOCUS XM_013248280 3729 bp mRNA linear INV 02-SEP-2023 (LOC106084536), transcript variant X4, mRNA. ACCESSION XM_013248280 VERSION XM_013248280.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248280.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3729 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3729 /gene="LOC106084536" /note="inhibitory POU protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084536" CDS 1030..2112 /gene="LOC106084536" /codon_start=1 /product="inhibitory POU protein isoform X3" /protein_id="XP_013103734.1" /db_xref="GeneID:106084536" /translation="MTMSMYSSTDKMKMSAPSCFPGRYSPSYRSSEQMRRCMPNPSGD IFAGINDGILSRAEALSAIDIGKHQASHVHPSQMTSQMKHDVMYHHHSMGGPPQRPLQ MHHSMDQLDMLDPTGSMTTLAPISETPLTPTHQHLHGSYHSMNHMMTHHHPSGLGGHS TGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN QRQKQKRIVSSVTPSMTGHGSTGFGY" misc_feature 1585..1818 /gene="LOC106084536" /note="Found in Pit-Oct-Unc transcription factors; Region: POU; smart00352" /db_xref="CDD:197673" misc_feature 1882..2052 /gene="LOC106084536" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" polyA_site 3729 /gene="LOC106084536" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgaaatctg ttcgggtccg tttagtttaa acaatagcag cagatacaga tacagataga 61 tatctacact tacttacact tactgtctgc ctctgcttgt tcttgttgtt gttcttcttc 121 ttctacttcg tcttcatgtt cttggcaagg caaggcgact cactcgtggg ccaaatcctt 181 ctcgagatac aataattata cccataacag tgcgtgtttg ttatccaagc ggccgacgac 241 tacgacgacc accaccagac caacaaacca accaaccaac cgaccgaccg aacagccagc 301 cacgcaggca gtcaagtcag tcagccagcc aacgaagcag ccaaacaacc tactttataa 361 tttatcaagc ttatttgtga ttcatagtta gcattcgtta tttcattatc aattgtgatc 421 aattttataa ttaaagtttc atatctggtg gcggcggcga cggtaaacga atgatttgca 481 tatcccatac agctagccag ccaaccagcc agccagcata ccaacaacat actacaactg 541 catcccaaaa tcctaaggga aagtgaagaa aatttataaa acaaatacta aagatccaag 601 gatatatagg ggccgaatcc atttcacctc ccccccctcc cccatactca caagaagtgt 661 tgttgcgtcc gttaattgtg cattaataaa tttaagaaat atagagaaaa aaatcgcaaa 721 cgcgagtgtg tgtgtcagtg agtgcgttct agagtgccaa cgcttaatcc atataccata 781 gcaaacaaaa tagcaaagga tatcgctgga gaaaataaat caacaaaaga agaaaagcaa 841 agaatttaaa ttggcctttc caggggccca acgcaaaaga tttcgaaaat ttgttaattt 901 gtgttgtcct gcttgttgta agcaggattt gtgcttgaaa ttgtttaaaa gtgcttcaaa 961 atttactctc caacgacttt tgacgcctcc agggcgttca aactagaaga agatttcgtg 1021 ggaggctgca tgaccatgtc gatgtactca tcgacggata aaatgaaaat gtcggcgccc 1081 agttgttttc ccggtcgcta cagtccttcc tatcgaagtt ccgagcaaat gaggcgctgc 1141 atgccaaatc cttcgggcga tatatttgct ggaatcaatg atggcatact cagcagagcg 1201 gaagcgctgt ctgcgataga cataggaaag catcaagcgt ctcatgtaca tccctcgcaa 1261 atgacctccc aaatgaagca tgatgtaatg tatcatcatc acagtatggg aggtcctccg 1321 caaaggccac tgcagatgca tcactcaatg gaccagttag atatgctgga tccaacgggt 1381 tcgatgacaa cgctagcccc catttcagaa acgcctttaa cacctacgca ccagcattta 1441 catggatcct accacagtat gaaccacatg atgacgcatc atcatccgag tggtttaggt 1501 ggacactcaa cgggtcatca tggtcattct gcggtacatc atcctgtgat aacagcggca 1561 gttgctgcgg cgggtctaca tccggacacc gatacagatc ctagagaact cgaggcgttt 1621 gcggagagat ttaaacaaag aagaataaaa ttaggagtca cacaagccga tgtcggaaaa 1681 gcactagcga atttaaagtt acctggagtt ggggcgctct ctcaaagtac aatatgtcga 1741 tttgaaagtc tcacactgtc tcacaataac atgattgccc tgaagcccat tctgcaggcg 1801 tggctggagg aagcggaggc tcaggcgaaa aacaaacgac gagatcctga tgcccccagt 1861 gtactgcctg ccggcgaaaa gaaaagaaaa aggacttcca ttgcggcacc tgaaaagcga 1921 tctttggaag cgtattttgc cgttcaaccg agaccatctg gtgagaagat agctgccatt 1981 gccgagaagc tggacctgaa gaagaatgtg gtgcgagtat ggttctgtaa tcagagacaa 2041 aaacaaaaac gtatagttag cagcgttaca ccctcgatga ctggacacgg atcaacgggg 2101 tttggttact gatagccgat gtttcccgga gaccactaca tgtagattgc ctcccccacc 2161 acggatcaca ccgaacacca aagccccagc cccaagatgt ggacgtggac gtgaacagac 2221 cccaacaccc catgatgacc atgaagatga ccaaatgcga gcgagcacca atccaaattc 2281 aaatcgatca tcgacccctt catggctgca cactctacat gatgccaaca atcaaatgcg 2341 attatatatg gaacgatcaa tgcaaacaat ggaccaacat atcaaatgca ataacattac 2401 aactaatgat acatttttaa aaccgggaac tacgacattg atgtgtatag tcaaatttat 2461 tatgtatgcc tttcggagac cttcaaggac atctggaata ccttttaagt ttttttattt 2521 ttgtttttat tttagtaatt gcaatgtcgt agtctctatg cttcctttag agtactacac 2581 acaaaaacac tcacacacac acacactcac acacatatac aagccactta tctgaaatga 2641 aaatccatac ttcaaacatg cagactaata aaaacaaaaa aggaaaacaa aatacataaa 2701 gtcacctatc tgcactgaag gctgccgcct tcccccaccc ccacaaaaag gataagattt 2761 tccttggaac tggtgaacga tggaacttca aaaacgaaag cagcactcaa gcactcggaa 2821 atgcaacgaa tttaacctgt tgccaaacta taagtataac aattaattat taatataatt 2881 ataacaaaaa aaaaacagac aaagaggact atagaggaag gcgttaacag tgataagaag 2941 aagaagaaga cgaagaaaaa tatgctgacg ttgacgcaaa tgctgttatt gatgaaatga 3001 tcctgtcgtg gacggtcagg atgattttca ataaagattt ttacaaaata ctcctaagac 3061 tatagagatg tacagattta actagattta caaccaaacg aaaaacaaaa tggcgaaaac 3121 taaactacta tttgaatatg tatgtaaata ttcctataca taaagacaac gtactacata 3181 catacatgca taactatgta tagaagcata tacatacata taaaactatg tatgtgctat 3241 attctttata cataacaaaa aaaaaagaaa aaaacaaaaa caaataaata acagcaacag 3301 aagaaaaaga aacaaagcca ttagaaagag aaaaaaaaca aaaccaagaa aataccaaca 3361 gagaaaatta tattataaat aattaatatt taaataataa aacgaaaagt gaaataaaaa 3421 acaaaaaaaa aacatttcat agatttactt ttaagtagtt ttgtatctac ataagtagca 3481 ataaatttta atacccccat gcagttttac ttttattcca ataacgagta tccttttcca 3541 tctcttttta attattatat ctgtaaatat gtaatttgca aaatgaaact aaaaacaaca 3601 acaacaacaa caaaagaaac caaattaaaa acgaataaaa cattatcttg ttaatttcaa 3661 ttcattacta actgtagatg tactattacc gaatgtagcg gataataaag tcagtctagt 3721 tgaaaataa