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LOCUS XM_013248277 3786 bp mRNA linear INV 02-SEP-2023 (LOC106084536), transcript variant X1, mRNA. ACCESSION XM_013248277 VERSION XM_013248277.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248277.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3786 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3786 /gene="LOC106084536" /note="inhibitory POU protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106084536" CDS 1030..2169 /gene="LOC106084536" /codon_start=1 /product="inhibitory POU protein isoform X1" /protein_id="XP_013103731.1" /db_xref="GeneID:106084536" /translation="MTMSMYSSTDKMKMSAPSCFPGRYSPSYRSSEQMRRCMPNPSSR LLEDASLLCNSWSARQNGDIFAGINDGILSRAEALSAIDIGKHQASHVHPSQMTSQMK HDVMYHHHSMGGPPQRPLQMHHSMDQLDMLDPTGSMTTLAPISETPLTPTHQHLHGSY HSMNHMMTHHHPSGLGGHSTGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAE RFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA WLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA AIAEKLDLKKNVVRVWFCNQRQKQKRIVSSVTPSMTGHGSTGFGY" misc_feature 1642..1875 /gene="LOC106084536" /note="Found in Pit-Oct-Unc transcription factors; Region: POU; smart00352" /db_xref="CDD:197673" misc_feature 1939..2109 /gene="LOC106084536" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" polyA_site 3786 /gene="LOC106084536" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgaaatctg ttcgggtccg tttagtttaa acaatagcag cagatacaga tacagataga 61 tatctacact tacttacact tactgtctgc ctctgcttgt tcttgttgtt gttcttcttc 121 ttctacttcg tcttcatgtt cttggcaagg caaggcgact cactcgtggg ccaaatcctt 181 ctcgagatac aataattata cccataacag tgcgtgtttg ttatccaagc ggccgacgac 241 tacgacgacc accaccagac caacaaacca accaaccaac cgaccgaccg aacagccagc 301 cacgcaggca gtcaagtcag tcagccagcc aacgaagcag ccaaacaacc tactttataa 361 tttatcaagc ttatttgtga ttcatagtta gcattcgtta tttcattatc aattgtgatc 421 aattttataa ttaaagtttc atatctggtg gcggcggcga cggtaaacga atgatttgca 481 tatcccatac agctagccag ccaaccagcc agccagcata ccaacaacat actacaactg 541 catcccaaaa tcctaaggga aagtgaagaa aatttataaa acaaatacta aagatccaag 601 gatatatagg ggccgaatcc atttcacctc ccccccctcc cccatactca caagaagtgt 661 tgttgcgtcc gttaattgtg cattaataaa tttaagaaat atagagaaaa aaatcgcaaa 721 cgcgagtgtg tgtgtcagtg agtgcgttct agagtgccaa cgcttaatcc atataccata 781 gcaaacaaaa tagcaaagga tatcgctgga gaaaataaat caacaaaaga agaaaagcaa 841 agaatttaaa ttggcctttc caggggccca acgcaaaaga tttcgaaaat ttgttaattt 901 gtgttgtcct gcttgttgta agcaggattt gtgcttgaaa ttgtttaaaa gtgcttcaaa 961 atttactctc caacgacttt tgacgcctcc agggcgttca aactagaaga agatttcgtg 1021 ggaggctgca tgaccatgtc gatgtactca tcgacggata aaatgaaaat gtcggcgccc 1081 agttgttttc ccggtcgcta cagtccttcc tatcgaagtt ccgagcaaat gaggcgctgc 1141 atgccaaatc cttcgagtcg cttgttagaa gatgcatccc ttctatgcaa ttcatggtca 1201 gcacgccaaa atggcgatat atttgctgga atcaatgatg gcatactcag cagagcggaa 1261 gcgctgtctg cgatagacat aggaaagcat caagcgtctc atgtacatcc ctcgcaaatg 1321 acctcccaaa tgaagcatga tgtaatgtat catcatcaca gtatgggagg tcctccgcaa 1381 aggccactgc agatgcatca ctcaatggac cagttagata tgctggatcc aacgggttcg 1441 atgacaacgc tagcccccat ttcagaaacg cctttaacac ctacgcacca gcatttacat 1501 ggatcctacc acagtatgaa ccacatgatg acgcatcatc atccgagtgg tttaggtgga 1561 cactcaacgg gtcatcatgg tcattctgcg gtacatcatc ctgtgataac agcggcagtt 1621 gctgcggcgg gtctacatcc ggacaccgat acagatccta gagaactcga ggcgtttgcg 1681 gagagattta aacaaagaag aataaaatta ggagtcacac aagccgatgt cggaaaagca 1741 ctagcgaatt taaagttacc tggagttggg gcgctctctc aaagtacaat atgtcgattt 1801 gaaagtctca cactgtctca caataacatg attgccctga agcccattct gcaggcgtgg 1861 ctggaggaag cggaggctca ggcgaaaaac aaacgacgag atcctgatgc ccccagtgta 1921 ctgcctgccg gcgaaaagaa aagaaaaagg acttccattg cggcacctga aaagcgatct 1981 ttggaagcgt attttgccgt tcaaccgaga ccatctggtg agaagatagc tgccattgcc 2041 gagaagctgg acctgaagaa gaatgtggtg cgagtatggt tctgtaatca gagacaaaaa 2101 caaaaacgta tagttagcag cgttacaccc tcgatgactg gacacggatc aacggggttt 2161 ggttactgat agccgatgtt tcccggagac cactacatgt agattgcctc ccccaccacg 2221 gatcacaccg aacaccaaag ccccagcccc aagatgtgga cgtggacgtg aacagacccc 2281 aacaccccat gatgaccatg aagatgacca aatgcgagcg agcaccaatc caaattcaaa 2341 tcgatcatcg accccttcat ggctgcacac tctacatgat gccaacaatc aaatgcgatt 2401 atatatggaa cgatcaatgc aaacaatgga ccaacatatc aaatgcaata acattacaac 2461 taatgataca tttttaaaac cgggaactac gacattgatg tgtatagtca aatttattat 2521 gtatgccttt cggagacctt caaggacatc tggaatacct tttaagtttt tttatttttg 2581 tttttatttt agtaattgca atgtcgtagt ctctatgctt cctttagagt actacacaca 2641 aaaacactca cacacacaca cactcacaca catatacaag ccacttatct gaaatgaaaa 2701 tccatacttc aaacatgcag actaataaaa acaaaaaagg aaaacaaaat acataaagtc 2761 acctatctgc actgaaggct gccgccttcc cccaccccca caaaaaggat aagattttcc 2821 ttggaactgg tgaacgatgg aacttcaaaa acgaaagcag cactcaagca ctcggaaatg 2881 caacgaattt aacctgttgc caaactataa gtataacaat taattattaa tataattata 2941 acaaaaaaaa aacagacaaa gaggactata gaggaaggcg ttaacagtga taagaagaag 3001 aagaagacga agaaaaatat gctgacgttg acgcaaatgc tgttattgat gaaatgatcc 3061 tgtcgtggac ggtcaggatg attttcaata aagattttta caaaatactc ctaagactat 3121 agagatgtac agatttaact agatttacaa ccaaacgaaa aacaaaatgg cgaaaactaa 3181 actactattt gaatatgtat gtaaatattc ctatacataa agacaacgta ctacatacat 3241 acatgcataa ctatgtatag aagcatatac atacatataa aactatgtat gtgctatatt 3301 ctttatacat aacaaaaaaa aaagaaaaaa acaaaaacaa ataaataaca gcaacagaag 3361 aaaaagaaac aaagccatta gaaagagaaa aaaaacaaaa ccaagaaaat accaacagag 3421 aaaattatat tataaataat taatatttaa ataataaaac gaaaagtgaa ataaaaaaca 3481 aaaaaaaaac atttcataga tttactttta agtagttttg tatctacata agtagcaata 3541 aattttaata cccccatgca gttttacttt tattccaata acgagtatcc ttttccatct 3601 ctttttaatt attatatctg taaatatgta atttgcaaaa tgaaactaaa aacaacaaca 3661 acaacaacaa aagaaaccaa attaaaaacg aataaaacat tatcttgtta atttcaattc 3721 attactaact gtagatgtac tattaccgaa tgtagcggat aataaagtca gtctagttga 3781 aaataa