PREDICTED: Stomoxys calcitrans serine--tRNA ligase, mitochondrial

LOCUS       XM_013248273            1318 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106084534), transcript variant X3, mRNA.
ACCESSION   XM_013248273
VERSION     XM_013248273.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248273.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1318
                     /gene="LOC106084534"
                     /note="serine--tRNA ligase, mitochondrial; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106084534"
     CDS             16..1311
                     /gene="LOC106084534"
                     /codon_start=1
                     /product="serine--tRNA ligase, mitochondrial isoform X2"
                     /protein_id="XP_013103727.2"
                     /db_xref="GeneID:106084534"
                     /translation="MYENVKRYIKSYIEGMFKSTLRFNLMKIPLRSFCAKPVCAIISE
                     DLHHYGSTSNLDKMEQNVLLRKGSNNIPVIRELIKKLDMKNDSDVAKLKGELSKLPNL
                     THPRIVNYGDEPKELEQFSPSDSFPTHATEFSEVAKYMNIFRMDHLGNYTGHKSYYLF
                     GKLAELEQAIKEYTVQQLLQNNFSLISVPDILPKEVIEGCGMNTDGERTQVYKLDSGL
                     CLSGTSEMALAGFFENQVLEEKQLPIKVAAVSRCYRAETSGLNEEKGIYRVHQFTKVE
                     MFAICAESQSEDVLELFKDLQLENFKKLNLKIRLLDMPPSELGAPAYQKYDIEAWMPG
                     RKVWGEISSSSNCTDYQAKRLNIRYKTNKGETKFAHTVNGTAAAIPRLLIAILESNQV
                     DKNSIEIPKVLGEYMKNCSITKDKLIPEIKLLKHLKHDI"
     polyA_site      1318
                     /gene="LOC106084534"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgaaaatgtg aagagatgta tgaaaatgtg aagagatata taaaaagtta tattgaaggc
       61 atgtttaagt caacattaag gtttaatctt atgaaaatac ccctgcgttc tttctgtgcc
      121 aaacctgttt gtgccataat atctgaagat ttacatcatt atggatctac ctctaatttg
      181 gacaaaatgg aacagaacgt cttgctgcga aagggctcca ataatatacc agtaatacga
      241 gagttaataa agaaattgga tatgaaaaac gactctgacg ttgcaaaact aaagggggag
      301 ctgtcaaaac tgcccaatct tacacatcct agaattgtga attatgggga tgaacctaag
      361 gaactggagc aattctctcc ctctgattct tttcccactc atgctactga gttttctgaa
      421 gtagcaaagt atatgaatat cttccgcatg gaccatttgg gtaattatac gggacacaaa
      481 agttattact tgtttggaaa attggctgaa ctagaacaag ctataaagga gtacacagtt
      541 caacaattgt tgcaaaataa tttttcttta atctctgttc ctgatattct gcctaaggag
      601 gtcatagagg gatgtggcat gaataccgat ggtgaaagga cacaagttta caaacttgat
      661 tctggattgt gcttgtctgg cacttctgag atggctttgg ctggtttctt cgaaaatcaa
      721 gtattagaag aaaagcaact gccaattaaa gtggctgctg taagccgttg ttatagagca
      781 gaaacgtcgg gattaaacga ggaaaagggt atatataggg tacatcaatt tacaaaagtt
      841 gaaatgtttg cgatatgtgc cgaaagtcaa tcagaagatg ttctggaact cttcaaggat
      901 ctgcaactgg aaaattttaa gaagttaaac ttaaaaatac gtctattaga tatgccacca
      961 tcagaattgg gtgctccagc ctatcaaaaa tatgacatag aagcttggat gccaggcaga
     1021 aaagtttggg gagaaatttc tagcagtagt aactgcactg attaccaagc aaaacgactc
     1081 aatataagat ataaaaccaa taagggtgag accaaatttg cccatacagt aaatggaaca
     1141 gcagctgcca tacctagatt attgatagca atacttgaat caaaccaggt tgataaaaat
     1201 tcaattgaga ttcctaaagt acttggtgaa tacatgaaga attgtagcat tacaaaagat
     1261 aaattgatac cagaaataaa attgttaaag catttaaagc atgatattta aagaaaca