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LOCUS XM_013248269 3669 bp mRNA linear INV 02-SEP-2023 mRNA. ACCESSION XM_013248269 VERSION XM_013248269.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248269.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3669 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3669 /gene="LOC106084533" /note="box A-binding factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106084533" CDS 1029..3386 /gene="LOC106084533" /codon_start=1 /product="box A-binding factor" /protein_id="XP_013103723.2" /db_xref="GeneID:106084533" /translation="MENNESSNNCAMKSGAVESRRQAMTTTTTTTTNGRTVVIKNENR DERTASATAEQLSSCKKTCVLNEGMCGSHHLGGGVSNNTTSGNGNNSHKMGSRRIFTP QFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCESSLRSSVANINQNTVKH QFHNISMHQQSQKSSIPSATAASLLSVSPYGANSQHGHLGLEAVRSEAPHSGAIIVPS LPSASSASVSSGVTTATTPSQGVFSAANLAAVVAAAAGAAMTITSQPSSNGSSMCPTD SVVPSPLRPTSIISASSNAVTAMSPLLHHHHHHHYGIPAYIHHHTPATVQLPVPILAH HISHPSQHIHQQAQQQQQQQQQHQPYQYHNLASYTQALTHQSSDKQQSSFLPSLSLPE VNVNALPPTAAASLTAATAAVNGFAIVVGESEHADSKTNSENMMESKEAANSGPKVSY PRHEYHQSTSLYQFKEDGVYSPLVYPLGPMDLSLRTRRNLKPDLPAAPKKDQEPAKMN MDSHTNNSSHSSIVDLTHRKRKGSSATCHNTDDNCTELSEKQLKLKDTNEEDNDHATN SHSDEDEVEIEVGTEEKLPPSKPVKLFKPYLLDTDADSENSTAVSSASTDMKYGESRE ASPWIRYTASLSPPPHCYDIATAHCQGGGGGGGATFQFSMKDNAFTMPSENANFPAEV KTSENMKSAFTSIPTISPTSFRSPKGSPSSSGYESSSSTYSDSSFSSRGESSYAYNRT YSLSLQMHSLHQEQINLQRSKHVERWLEQESRTPSEPNSPIAILA" polyA_site 3669 /gene="LOC106084533" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gagagagtga gtaatgagtg tgttcacatt catgcatacc cacactcaca cccatgcatt 61 gaaccacaca ccgcgctgaa agaaactcgt tgtgcatggt gtattcgggt cggtaaggga 121 atgtatgact gtgtgtgtgt gtgtgtggca ccaccacatt ggaaatacct agagccagaa 181 tgtctgccag tgtctggcga attgaacatt aaaatatact tctacagagt ttcttagtta 241 gttggaagag aaaaaacaca gcgatcgaac gtgtgttctt gttattgtgc cgccgcgctg 301 tttgtatatt tcattcgttc gtttcacacc tcgtgtccca cacttgcttg tcgccctcac 361 aattcaattc agtaaaacaa aaaaaaaaaa acaacacaaa aaatgaaaag aactcaagca 421 aacaattaga atcagtgaaa gaatacggcg acgacgacga cggcgacgaa ccaacaacaa 481 aaactacaac aaaacactct ttatacacca cattcacgcc aagagacaaa ccgacgacag 541 ccaaccagcc agccagccaa caactacgat gttgtttcgg tcggtagaag aacactaagg 601 caagcaatta ctatagcaca catagcaaaa caactagaac gagtcttcga actagaacgc 661 ataacacttg tgttttggat ttgaaggtgt tcggtcgcaa ccatagaaat agccgtggga 721 atgagttatt acaacaactg acacagaacc aaaagaaaaa aaactaataa taaaagagtg 781 aagtgttaaa atcattatta ttattaccgc caccaacgga ctaccttaca tagaacatat 841 atcgtcatca gacaaaaaca aaaactattt tttattataa atgatttaaa atcaaatcaa 901 aaattctaaa gaaaaacttt gattgtgaac ggaagtgcct atattattaa taattagtat 961 atgtgtatat attaatgtta aaaaaattaa aacttgttac gctttttgca cctaaaaata 1021 cctaaaagat ggaaaataat gaaagtagca ataactgtgc gatgaagagt ggcgcagtag 1081 aaagtcggcg ccaggctatg acaacgacga cgacgactac gacaaatggc agaacggtag 1141 ttatcaaaaa cgaaaataga gatgagcgaa ctgcaagcgc caccgccgaa cagttgagca 1201 gctgtaagaa aacatgtgtg ttaaacgaag gaatgtgcgg gagccatcac ctaggtggtg 1261 gcgtttccaa caacacaaca agtggaaacg gaaataatag ccataaaatg ggctcacgcc 1321 gcatctttac accgcaattt aagctacaag ttctggagtc gtatcgcaat gacaacgatt 1381 gcaaaggcaa tcaaagggct acagcccgca aatacaacat acatcgcagg cagatacaga 1441 aatggctgca gtgcgagtct agtctaagat catcggtggc gaatatcaat cagaatacgg 1501 tgaaacatca gtttcataac atcagcatgc atcagcaatc gcaaaagtct tccattccct 1561 ctgccactgc cgcctcactg ttaagtgttt ccccatatgg agcaaacagc caacatggcc 1621 atttgggatt agaagctgta agatcggaag cacctcatag cggtgcaata attgtgccat 1681 ccctgccatc cgcatcgtcg gcatccgtgt cgtcgggagt gacaaccgca acgacaccca 1741 gccaaggggt attctccgcc gccaatttag ctgcagtggt tgcagctgca gccggagctg 1801 ctatgactat tacaagccag ccatcctcta atggttcttc aatgtgtccc accgactctg 1861 tggtcccctc gcctttgcgt cccacatcga taatcagtgc cagcagcaac gcagtcacag 1921 caatgtcacc cctgctccac caccatcatc accatcatta cggaatccca gcatatatac 1981 accatcatac acctgcaaca gttcaactgc cagtgccgat attagcacac catatttctc 2041 atccatctca acacatacat cagcaggccc aacaacagca acagcaacaa caacaacacc 2101 aaccgtatca ataccataat ctggcgtcgt atacacaggc actaacacat cagtcatcag 2161 acaagcaaca gtcatcgttt ttgccgtcac taagtctacc cgaagtgaat gtgaatgcct 2221 taccaccaac agctgctgcc tcccttaccg ccgccactgc cgctgtcaat gggtttgcca 2281 tagtagtagg tgaatcggaa catgccgatt ctaaaacaaa ttccgagaat atgatggaat 2341 caaaagaagc agcgaacagt ggacccaaag tcagctaccc acgccacgaa taccaccaat 2401 caacaagcct atatcaattc aaggaagatg gtgtttactc accgctggta tatcctttgg 2461 gtcccatgga cttgtctctg cgtacacgcc gaaatctgaa gcctgatttg ccagcggcgc 2521 ccaaaaaaga ccaagagcct gccaagatga acatggatag ccacaccaac aacagcagcc 2581 acagcagcat tgtcgatttg acgcaccgga aacgtaaggg gtcgagtgcg acgtgccata 2641 acacggatga caattgtaca gagctatccg agaagcagct aaaactaaaa gacaccaacg 2701 aagaagacaa cgatcatgcc acgaactctc acagcgacga agatgaagtg gagatcgagg 2761 tgggcacgga ggagaaactg ccaccttcta aaccggtaaa actattcaag ccatacctac 2821 tcgacaccga tgctgattct gagaacagca cagcggttag cagtgccagc actgatatga 2881 aatatggcga gtcaagagag gctagtccct ggatacggta tacggcaagt ctttcaccgc 2941 cgccacactg ttatgacata gcgacggctc attgtcaggg tggcggtggc ggcggcggcg 3001 ctacatttca gttctccatg aaagacaatg ccttcaccat gccctccgaa aatgcgaatt 3061 ttcctgccga agttaagaca tcagagaata tgaaaagtgc cttcacctcc attcccacca 3121 tctcgcccac ctccttccgc agccccaagg gatctccttc gtcatcgggc tacgaaagtt 3181 catcctccac ctacagcgat tcgtcattct cctctcgcgg tgaatcctct tacgcctaca 3241 accgaaccta cagccttagc ctgcaaatgc actcgctaca ccaggagcag ataaacttgc 3301 agcgctccaa acacgtagaa cgctggttgg aacaggagtc gcgcaccccc tcagagccca 3361 attcccccat agctatatta gcttagaata tatatatatg aaaataataa taaatgcctt 3421 tgctccccta acatttatga agaatgtatg ccattggatt tgaatccatc gtcttataag 3481 agagaaaaca aaaaaactca atacaattaa aacatatcaa caacaaccac ctagcactta 3541 agcaaaaaaa aaaaatattt aaaagttaag cattaattta aaaacaaaag gacaatagtt 3601 ttttcatata cacacataca tacatacaca cacacatata tatctataca attatgaata 3661 aactatgaa