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LOCUS XM_013248266 5942 bp mRNA linear INV 02-SEP-2023 (LOC106084531), mRNA. ACCESSION XM_013248266 VERSION XM_013248266.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248266.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5942 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5942 /gene="LOC106084531" /note="nuclear pore complex protein Nup205; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106084531" CDS 70..5868 /gene="LOC106084531" /codon_start=1 /product="nuclear pore complex protein Nup205" /protein_id="XP_013103720.2" /db_xref="GeneID:106084531" /translation="MEGIPDDMWSPFKQLYRVIEQTILNPNEADISNLEVSLKRHKQI FVNLLRNPPKNEANRSQLRAYVTQGVPVAGNVRVPLSKDLIDESIIISDMFDLDEFLA LELLCTAQHQIIHYPGLPRGLVAVLLYYDGRKAIANSIRDLFQITSGVSWIPDSPKQL VSLVSSFSQALVDDSNILERIVDLLDELDIVKETVMLTKNRALGDNKHQNQVMELFED IRMSLATALFNWSAQRGLPKFNAIKLLRSLSQNKAKEANGEVENTTLTMLLALLYSYD TSILQKQDDNTLIQNLSIIRDHEYVQHMYNALMGETSSDCNSGIVNLVKFSFGLAISG LRHASQYVHNHMSVTDYDEQLVDDAICSSVFKFLYCCILEKDLIYQNQFFYRRIHMIF ADFIDFMHSKVTELRGRADETSKTVIGFTKEGLEPPQNLDYNFEMLLLCIGKFYADDK AGLSLCSEYWGPLEPSSNYATTTRSVSLFKFIRLAGELLPTTLFVPYLKMIAGLSSCE RSARSTFNLLKQSTGLTGSAALSWEHFFSSLSRYYTNLKQDFHTSSDSIYRSRMINRN ISPQEIEGLRAVLEVLRAVALHDEVARIAICEHPNWNPLFTLIGLLGCSVPIYLKSDI LMTLSALGRSKETAIPLWNNLEASQIIKTLPTNMTYDTCNLEMEIEQNECRLEQYPLT NSILDLLYSLVTTVIPKNLGGGPRKPGLDPYLKFVINGIFLKFYNRTYKDPSEKWRVG AKCLKFLHYLLDIYEVNPMDFEDNLDTNPHPGYHIMLNLQTKSDTLRLILQIIDDARM ELDDLKKFHGKVALEECALHCLRIIKLGLKNQDIFFEAHSISNSAVLLSGLNKIMLDI NPRSRKPDHVLNSTYFLTYFNWLPFHALEAVKILHMVSNQPGVNSQIVGIFTQNENTK TVLRHGFVECLETDFVQRQTKPENNEDAIGTEGLESPKVHLQIKEAIIMLIQDCLCQP TPNLGQFLLGFDHLKDVQSTNKNRLGLFDLGINCTKSLVFLLEKHLQMKKNSNNLQVD VENIAERCFSLLFSLCENPKTSDQILRYLRTRHDFLCRYLNEFPVLSVENSHVINQIS YLLRSIAIELKLTASNCQLSRFQHISDFFLGMPSKSGQDSTAMELNHFYATNSNAIID TTTNTSATRNNLLCELINSIDLEVGQIPVPSWNYFDKTLLEQIFKECEYKANEGHKLI DLRKIHATLHGELKIVQSTIASGQRRLILQEIESVMMHALNVNEQRCKRFAIVKFVEA WSQVSEILFSCVPSSCLAMSKKQELIIEILQKILLKISPNQTILEISAIISETILILL VNLRNCFSSSLEQEHERGEQTTAEMNKYHPSKSNTLNIKFILKYLLEWIIVSGVVSQK LRINLYASLLNCLSIVKEQSSRKPIALSNENLVTRLDKSKGNDSMYADTTHIRMSIEV LLSFGEKLMETICHDCIAGHDICKMSALACIDVLLDIDSMAHLMNFIAHHGYLSHIIE SIAKSDNQLCATLSNAPENMKYLYVYESKMSMLLRFANTHLGAELLLSNKVLDVLSSM KVLDMHPDLKRKEVWQRNEMRDFIPGFDYRFRQILFPALNLCDCLVSTLGTENYSVIS QVMHFLFSHWDMIEIILRSGSPFSDLGLLEELSLITGVIARTFNQETLSLINIDTTGD IGVNLYRIQKLMLSIYLRFIISDVNFKEMLKPDNALYEQTDENTSLHIKYFLEIAANL TLFCRNIVTNNSADHRTNGLLFSPHIHEAVHRSEDHINNIYNHYNLGIVVDQLKGSVE YYHAQKAIFEGMLRQRSVLDNISFDSMAKDKYTQINKQLVDKQNVLYLCVFIAEQCLY LLWSHLDYYMRYSSSAKHDVHSYDDNELTNVYKCSNDELEKLKKKLVLVFNETFSKQL CTTSDAPESKEAAFNIALLRRIKSLIQYFPAK" polyA_site 5942 /gene="LOC106084531" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtttctaatt atcattagaa tcttgattcg catagccggc gtgttcttta attttcattt 61 ttttgcacaa tggaaggtat tccagatgat atgtggtcgc cctttaagca gctctaccgg 121 gttatagaac agacaattct taatccaaac gaagctgata tctcgaattt ggaggtgtcg 181 ctcaagcggc acaaacaaat atttgtaaat ttgcttcgca atccgcctaa aaatgaagcc 241 aatcgatctc aattgcgggc gtatgttaca cagggtgtac ctgttgctgg aaatgtccga 301 gtgccattgt ccaaggatct catcgatgag agcataatca tatcggatat gtttgattta 361 gatgaatttt tggctttaga attgctgtgt actgcccaac atcaaataat tcattatcca 421 ggccttccaa gaggtttagt agccgttctt ttgtactacg acggacgaaa agccattgca 481 aactccatta gagatttgtt tcaaataacc agcggtgtat catggatacc tgattcacca 541 aaacaattgg tctcattggt gtcatcgttt tcgcaagcgc tagtggatga ttcaaatata 601 ttggaaagaa ttgtggatct cttggacgaa ttggatattg ttaaggagac ggttatgttg 661 accaaaaaca gagctctggg agataacaaa caccaaaacc aagtaatgga actgttcgaa 721 gatatacgaa tgtcattagc aactgcttta tttaattggt ccgctcaaag aggtttgccg 781 aaattcaacg caataaaact acttagaagt ttatcccaaa ataaagcaaa agaagccaat 841 ggagaagttg aaaataccac acttactatg ctcttggccc ttctgtactc atatgatact 901 agtattttgc aaaaacaaga tgacaatacc ttaatacaaa atttaagcat cattagggac 961 catgaatatg tgcagcacat gtataatgca ttgatgggag aaacaagttc cgactgcaat 1021 agtggaattg taaacttggt aaagttttca tttggattag ctatatcagg cttacgccat 1081 gcttcccaat atgtacataa tcatatgtcg gttaccgatt atgatgagca gcttgtggat 1141 gatgccattt gttcaagtgt tttcaaattt ttatactgct gcattctaga gaaggactta 1201 atttaccaga atcaattttt ctatcggaga attcatatga tatttgctga tttcattgat 1261 tttatgcact ccaaagtgac ggaactaaga ggcagagccg atgaaacatc taaaactgtt 1321 attggtttta ccaaggaggg tttggagcct ccacaaaatt tggattataa ctttgaaatg 1381 cttttattat gcataggcaa attttatgct gatgataagg caggtctttc gttatgctcc 1441 gagtattggg gcccactgga accttcatct aactacgcca caacaacacg ttcagtttcc 1501 ctttttaagt ttatacgctt ggctggtgaa ctcttgccca ctactctatt tgttccctat 1561 ttgaaaatga ttgctggtct atcaagttgt gagcgttcag caagaagtac atttaatctc 1621 ttgaagcaat ccacggggct gactggcagt gcagcattat cttgggagca ttttttctca 1681 tctttgtccc gatattacac aaatttaaaa caggactttc atacctctag tgactctata 1741 tacaggagcc gcatgatcaa tcgtaacata agcccccaag aaattgaagg cctacgagct 1801 gttctggagg tcttacgagc agtcgcctta catgatgaag ttgctcgcat agccatatgc 1861 gagcatccaa attggaatcc attgtttacg ttaataggtc tgctaggctg ttcagtaccc 1921 atttatttaa agtctgatat tttgatgaca ctctcggctt tggggcgttc aaaagaaaca 1981 gctataccct tgtggaataa tttagaggcc tctcagataa ttaaaacgct tcccacgaat 2041 atgacttatg atacatgcaa cttagaaatg gaaattgaac agaacgaatg tcgactggaa 2101 cagtatccgc ttaccaatag catactggat ttgttgtatt cgctggtcac tacggttatt 2161 cccaaaaacc ttggtggggg tccaagaaaa cctgggttag acccatattt aaaattcgtt 2221 ataaatggaa tatttttgaa attttataac agaacttaca aagatccttc cgaaaaatgg 2281 agagttggtg ctaaatgttt aaaattttta cactatcttt tggacatcta tgaagtgaat 2341 cccatggatt ttgaggataa tctcgatacc aacccccatc caggatatca cattatgttg 2401 aatttacaaa caaaatccga tacattgcgt ttaattttgc aaatcataga tgatgctcgc 2461 atggaattgg acgatttaaa gaagttccat ggaaaggttg ctttggagga gtgcgctctg 2521 cattgtttaa gaattataaa gctgggtttg aagaatcagg acatattctt cgaggcacat 2581 tccatttcca atagtgcagt gttgctttcg ggtctaaaca aaatcatgct agatatcaat 2641 ccaagaagcc gaaagccaga tcatgtttta aattctacat atttcttgac atatttcaat 2701 tggttaccat ttcatgctct tgaagctgtt aaaatcctcc atatggtgtc caatcaaccc 2761 ggtgttaatt cccaaatagt tggtattttt acacaaaacg agaatactaa gacagtgttg 2821 cgccatggct ttgtcgaatg tttggaaacg gattttgtgc aaagacaaac caagcctgag 2881 aataacgagg atgctatagg cactgaggga ctcgaatccc caaaagtaca tttacaaatc 2941 aaggaagcta ttatcatgct tatacaagac tgcctgtgtc agccaacgcc gaatctggga 3001 caatttctat tgggtttcga tcatttgaag gatgtgcagt ccaccaacaa gaacagattg 3061 ggattatttg atttgggaat caattgcaca aaatctttgg tgttcctatt agaaaagcat 3121 ttgcagatga agaagaactc gaataactta caagttgatg tagaaaacat tgcggagcgt 3181 tgcttcagtt tgctattttc tctatgtgaa aatcccaaaa cttccgatca aattctacgc 3241 tatctgcgca ccagacatga ttttctgtgt cgttatttga atgagttccc agtgttgtct 3301 gtagagaatt ctcatgttat caaccagatc agttatctgc tgaggagtat agcaattgaa 3361 ttgaaattga ctgcctccaa ttgccaattg agcagatttc agcatatatc ggatttcttt 3421 ttgggcatgc catccaaaag tggccaagat agcactgcaa tggagctgaa tcatttctat 3481 gccaccaatt cgaatgctat tattgataca accacaaata cctcggccac aagaaataat 3541 ttgctatgtg aacttatcaa ctcgattgat ctggaagttg gacaaattcc tgtaccatca 3601 tggaattatt tcgataagac tctgctcgaa cagatattca aagaatgcga atataaggca 3661 aatgaaggcc acaagttgat tgatttgcga aaaattcatg caaccttgca tggggagctg 3721 aaaatagtgc agagtacaat agcaagtggt cagcgaagat tgattctaca agaaattgaa 3781 tcggtgatga tgcacgcttt aaatgtcaat gagcagcgtt gcaaacgttt tgccatagtc 3841 aaatttgtgg aagcttggag tcaggtttcg gaaatattgt ttagttgcgt gcccagttcc 3901 tgtttggcaa tgtctaagaa acaggagctt attattgaaa tattgcaaaa gatcttattg 3961 aaaataagtc ccaatcaaac catcctggag atatcggcta ttatatctga aaccattttg 4021 atactacttg ttaatctaag aaattgtttc tccagttcac tggaacaaga acacgaacgt 4081 ggcgaacaaa ccactgcaga aatgaacaaa tatcatcctt cgaaatccaa tacattgaat 4141 ataaaattca ttttgaagta tttattggag tggattattg ttagtggagt ggtttcccaa 4201 aaactaagaa ttaacctgta tgcctcctta ttaaattgcc tcagtatagt aaaagagcaa 4261 agttctagaa aacccattgc tctttcaaat gaaaaccttg ttactcgttt agacaagtcc 4321 aagggcaacg attccatgta tgcagatacc acgcacatta gaatgtccat tgaagtgtta 4381 ttgtcatttg gagaaaagct tatggaaacc atatgccacg attgcattgc tggacatgac 4441 atttgtaaaa tgtccgcttt agcatgcatt gatgtcttac tggatattga ctcgatggcc 4501 catttaatga acttcatagc tcaccatggt tatttgtctc acattataga gagtattgct 4561 aaaagtgaca atcagctatg tgctacactg tccaatgctc cagagaatat gaaatatctg 4621 tatgtgtatg agtcgaaaat gtcaatgttg ctgcgtttcg cgaataccca tcttggagca 4681 gaactgttgc tctcgaataa agttttagat gtcctctcca gcatgaaagt tttggatatg 4741 catcccgatt tgaaacgcaa agaagtttgg caacgcaacg aaatgagaga tttcatacca 4801 ggctttgatt atcgctttag gcaaattcta tttccagctt tgaatttatg cgattgtcta 4861 gtttcgacat tgggaactga aaattactct gtgatatcac aagtaatgca tttcttattt 4921 tctcattggg atatgattga aataattctc agatccggtt caccattttc ggatctgggg 4981 ctgttggagg agttgtcatt gataacagga gttattgcac gaacatttaa tcaggaaacc 5041 ctatctctta tcaatattga tacaactgga gacattggcg tcaatctgta tagaattcaa 5101 aagctcatgc tttccatata tttgcgtttc atcataagtg atgttaattt taaggaaatg 5161 ttaaagcccg ataatgccct atacgagcaa accgatgaaa acacctcact tcatattaaa 5221 tattttctag aaattgcagc aaatttaaca ttgttttgca gaaacatagt gacaaacaat 5281 tcggctgatc acagaactaa tggacttttg ttctcaccac acatacatga ggccgttcat 5341 aggagtgaag atcatattaa caacatatat aaccactata atctgggaat cgtagtggac 5401 cagcttaaag gttccgtaga atactatcat gcacaaaagg ccatcttcga aggaatgcta 5461 cgtcaaagat ccgttctaga caatatcagt ttcgattcaa tggcaaaaga taaatacact 5521 caaatcaata aacaactagt cgataaacaa aatgtgctct atttatgtgt cttcatcgcc 5581 gagcaatgtt tatatctact ctggagtcat ttggattatt acatgaggta ctcatcgtca 5641 gcaaaacatg atgtacactc ttatgatgat aatgaactaa caaatgtcta caaatgtagc 5701 aacgatgaat tggagaaatt aaagaaaaaa ttggttttag tgtttaatga aacattttca 5761 aagcagttgt gtaccacatc ggatgcgccc gagagcaaag aagctgcatt taacatagct 5821 cttttgcgca gaattaagtc attaatacaa tattttccag ctaaatagat agataaggat 5881 ttttaatagt aagccaaaac aataaagaaa aacaaaaatg tttatgattt tctcaaaact 5941 aa