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LOCUS XM_013248254 1588 bp mRNA linear INV 02-SEP-2023 (LOC106084521), transcript variant X3, mRNA. ACCESSION XM_013248254 VERSION XM_013248254.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248254.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1588 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1588 /gene="LOC106084521" /note="DEAD-box helicase Dbp80; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106084521" CDS 153..1544 /gene="LOC106084521" /codon_start=1 /product="DEAD-box helicase Dbp80" /protein_id="XP_013103708.1" /db_xref="GeneID:106084521" /translation="MEDGWAKKAEDQVSKLVSNLEIESKEETKESTDTPDVASPAETS LLLKIIRKGLVESKSDLEVQRKDPSSPLYSVKTFEKLHLKPEILKGIYAMGFNAPSKI QENALPILLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDTKLDYPQVLCLSPTYELAI QTGEAAARMAQFCPDIKLKFAVRGEEVAPGTKLTDHIIIGTPGKVLDWGLKYRFIDLK KIRVFVLDEADVMIATQGHHDQCIRIHKQLSPKCQMLFFSATYDKEVMEFAEHIVPEA NIIRLQREQESLDNIKQYYVRCNSEEEKYQAIQNIYGSITIGQAIIFCHTRKTASWLA GKLSTDGHSVAVLSGELTVEQRLAVLDRFRIGLEKVLITTNVLSRGIDVEQVTIVVNF DLPMDAKGRADCETYLHRIGRTGRFGKNGIAINLVDSEKSMEICRAIENHFKKTIKEL NADNTEEIEKIGS" misc_feature 333..1007 /gene="LOC106084521" /note="N-terminal helicase domain of the DEAD-box helicase superfamily; Region: DEAD-like_helicase_N; cl28899" /db_xref="CDD:475120" misc_feature order(522..542,828..830) /gene="LOC106084521" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:350670" misc_feature 1023..1433 /gene="LOC106084521" /note="C-terminal helicase domain of the DEAD box helicases; Region: SF2_C_DEAD; cd18787" /db_xref="CDD:350174" misc_feature order(1290..1292,1296..1298,1389..1391,1398..1403) /gene="LOC106084521" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350174" polyA_site 1588 /gene="LOC106084521" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatatgcgat ggcaactcta aaatttgcac cgtgtacacg gtacacggta aatcgccaat 61 tttgtttgca agaatagaat attcgatctt cctgtgtcag gacaaaaagt tgtttccagt 121 acattataga caaatcgcta catagcagaa gcatggagga cggttgggct aaaaaggctg 181 aggaccaagt gtccaagttg gttagtaatc tggaaatcga aagtaaagaa gaaacaaagg 241 aatctacaga tacgcctgat gttgcaagcc ctgcagaaac aagccttctt ttgaagatca 301 ttcgcaaagg tttagtagaa tcaaaatctg acttagaagt tcaacgaaag gatccctcat 361 caccactata ctcagtgaaa acttttgaga aattacactt aaaaccggaa atactaaagg 421 gaatttatgc aatgggtttt aatgcgccat ccaaaattca agaaaatgct ctaccaattt 481 tgttagctga tcctcctcaa aatatgatag cacaaagtca atcgggtaca ggaaaaactg 541 ctgcatttgt tcttgctatg ctaagtagag tggatacaaa actagattac cctcaggttc 601 tctgtttatc tcccacatat gaattagcca ttcaaactgg ggaagccgct gcaaggatgg 661 cacaattttg tccagatatt aaattgaaat ttgcagttcg aggagaagaa gttgctccgg 721 gaactaaact aactgaccat ataatcattg gcacaccggg aaaagtactt gattggggcc 781 tcaaatatag atttattgat ttaaagaaaa ttcgtgtgtt tgttttggac gaagctgatg 841 ttatgatagc cacccaaggt caccatgatc aatgtattcg aattcataag caactttccc 901 caaagtgtca aatgttgttt ttttcggcaa cttatgacaa agaagtaatg gaatttgccg 961 aacatattgt accagaagca aatattataa gattacaaag ggagcaagaa tctctagaca 1021 acatcaaaca atattatgtt cgttgcaatt cggaagaaga aaagtatcaa gccattcaaa 1081 atatttatgg cagcattaca attggacaag ctattatctt ttgtcatact cgaaaaactg 1141 ctagttggct tgctggcaaa ctgtcgactg atggacattc cgtggccgtt ctctctggtg 1201 agctcacagt ggagcaacgt ttagctgttc tcgaccgatt tagaattggc ttggaaaaag 1261 tattaataac tacaaatgtt ttgtctcgag gtatcgatgt tgagcaagtg actattgtgg 1321 taaatttcga tttacccatg gatgccaagg gtagggctga ttgtgaaacc taccttcatc 1381 gtattggtag aacaggacgc ttcggtaaaa atggcatagc cataaatctt gtggatagcg 1441 aaaaatcaat ggagatttgt cgagcaattg aaaatcattt caagaagaca attaaagaat 1501 tgaatgctga caatacggaa gagattgaaa aaattggatc ctaaatacca ttcatgtgaa 1561 ataaactctt tacaggctat ttgtaaaa