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LOCUS XM_013248087 2524 bp mRNA linear INV 02-SEP-2023 (LOC106084417), transcript variant X2, mRNA. ACCESSION XM_013248087 VERSION XM_013248087.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248087.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2524 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2524 /gene="LOC106084417" /note="ras-related protein Rab-35; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins" /db_xref="GeneID:106084417" CDS 1076..1678 /gene="LOC106084417" /codon_start=1 /product="ras-related protein Rab-35 isoform X2" /protein_id="XP_013103541.1" /db_xref="GeneID:106084417" /translation="MSRGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVD FKIRTLVIDGKRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRW LDEIQNNCDVVNKVLVGNKNDDPERKVVITEDAQRFAQQMDIELFETSAKDNIKVEEM FLSITRQVLQHKLRTAQNEQQKDTINLKKSNKPKKSRCCS" misc_feature 1082..1672 /gene="LOC106084417" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 1118..1141 /gene="LOC106084417" /note="G1 box; other site" /db_xref="CDD:133310" misc_feature order(1124..1144,1271..1273,1433..1438,1442..1444, 1523..1531) /gene="LOC106084417" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133310" misc_feature 1193..1195 /gene="LOC106084417" /note="G2 box; other site" /db_xref="CDD:133310" misc_feature 1205..1213 /gene="LOC106084417" /note="Switch I region; other site" /db_xref="CDD:133310" misc_feature 1262..1273 /gene="LOC106084417" /note="G3 box; other site" /db_xref="CDD:133310" misc_feature order(1268..1273,1319..1324) /gene="LOC106084417" /note="Switch II region; other site" /db_xref="CDD:133310" misc_feature 1433..1444 /gene="LOC106084417" /note="G4 box; other site" /db_xref="CDD:133310" misc_feature 1523..1531 /gene="LOC106084417" /note="G5 box; other site" /db_xref="CDD:133310" polyA_site 2524 /gene="LOC106084417" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtagacaat gacgcatttg aagggaaaat cataaagaaa taaagaagaa atataaaatt 61 caaaattagt gtaaataatt ttaacggcgt taagaacagc gaatatacat cgaaattgtc 121 tcaacagatt tttcgagtga acaccgagca gaaagtgaaa cttttcggtg gaaactaaaa 181 aacgattagc aaaaaaagaa gggagttcat caattgcaac aacaatctgc aaagctaagt 241 atagtcgttt ttaaacaaca acacagcaca agcgactcac ttgacagcag ctgcatcagc 301 tttttctatg gtcatagggt attggggatt atggccagga gttagaggaa ttgaacaaaa 361 atagaggcaa caacaagctc tgcgcaaaga agttttcaaa aattctgaac ctgctgacaa 421 aatcgatgga caaagttttt tttttaattt gaaaatccat tcgtctttac atcataagaa 481 gtagatccac tacgaaactt ctgcaagctg cgttgttgta aagaatatca taaaaccacc 541 gattatacac tactctttca tggaacatat taccggctat ctaacgccct aatccctgaa 601 cattgtatag tgtgcaagaa ctagaacgaa aataatttaa aagcgagaaa gcaaaaagcc 661 caataagata tgaacaagta attttcttat caatcccaca gtcacaaaag caaatcatac 721 cccctaaaaa taccgtacag aacggaaaca atcttatgta ttcatttgaa cacaattcta 781 cttctgtatt gcattggtta tatgtacaag gaactgcata ataccccaat ttaaaaggaa 841 ctttattcgg tacattattt tttcctgaag gcgtatagta aattctcgta ccaagtcttc 901 ctccagagta tactgtggag cattatttta gtacatagcg taatacttgt gatttgacaa 961 tatttcggac tggagcaaca aacctcgact catcgcaaca gataaacatt tgttctaccg 1021 ccctccacaa ctagccgaaa agccaatacc accattaaca taatcggttg ccaccatgtc 1081 tcgtggtttt gatcatttat tcaaactttt aataatcggc gatagtggtg ttggtaaatc 1141 ttcgttactt atacgcttct cagatgacac attttcgggc agttatataa ccacaattgg 1201 cgtagatttt aaaatacgca cattagtcat cgatggtaag cgtgtaaaat tacaaatctg 1261 ggatacggcg ggccaagaaa gatttcgtac cataacgagc acttattatc gtggaacgca 1321 tggtgttata gttgtatacg atgtaacgaa tggtgaatca tttgcaaatg tccgccgatg 1381 gttggatgaa atacaaaata attgtgatgt tgtaaacaaa gtattagttg gcaataagaa 1441 cgatgatccc gaacgaaaag ttgttatcac cgaagatgcg cagcgatttg cacaacaaat 1501 ggatattgaa ctattcgaaa catctgccaa agacaatatc aaagtagagg aaatgttcct 1561 ttcgataacg agacaagtcc tccagcacaa gttgcgtacc gcacaaaacg aacaacaaaa 1621 agataccatc aatttgaaaa aatccaacaa accaaaaaag agtagatgtt gtagttgaaa 1681 acggaagata tccgcttctt ttagaccact atcaccaccg ccgtcgcttt catcctattt 1741 tcaacagtca ccatattcat ctttccagag ggtgcagatt caatgcagag taccacaatc 1801 gggattttta acaataagaa tgtaaaaaac aaataatatt ttgtataaaa gtatggtaat 1861 tttatatgaa acaaaacaaa aaagaagata aacgtaagat cacctcaaaa gaaccccaaa 1921 ctggtgcata taacgatcgt cgaatatttt agtttaccaa ggaaaatttt taaaattgat 1981 attatacgca aattcagttg acgtgtgaat agccgacggt agcacaatct attgcttacc 2041 aactgagcgc gaaaatctat gttagatttt tcactccttg cttttagaaa tttgcttttt 2101 ttgtcctagt tcagttcttc tacctatcta tgtgcgcgtg tgttccccca tactatgtag 2161 agtgttttcg ttgcgatgtt caagaaaacc cctaaagtct agtttacctt ctctaatcca 2221 aatccctttt tcctagaaat ctttccccta ccaatcttaa gtgaaatgtc gtcttaccaa 2281 ccaatgatta tgtcttgtaa agcagaacaa accacactct tatattatta ttattattat 2341 tttaattata ttattattta aattaaatca tgaattaaaa cttatacaaa aaggcaaact 2401 atagaatttt taattcaaat tctattcaac tttatataaa aatatattta tatgatatga 2461 tcgatttatt taaaaaagca gaaaggaacc ccattaaata aaaaataaat catacaattt 2521 taaa