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LOCUS XM_013248086 2545 bp mRNA linear INV 02-SEP-2023 (LOC106084417), transcript variant X1, mRNA. ACCESSION XM_013248086 VERSION XM_013248086.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248086.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2545 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2545 /gene="LOC106084417" /note="ras-related protein Rab-35; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106084417" CDS 1076..1684 /gene="LOC106084417" /codon_start=1 /product="ras-related protein Rab-35 isoform X1" /protein_id="XP_013103540.1" /db_xref="GeneID:106084417" /translation="MSRGFDHLFKLLIIGDSGVGKTSLLLRFSDDAFNGCHITTIGVD FKIRTLVIDEKRVKVQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTDGGSFKNVRRW LDEIQNNCGVLNVILVGNKNDDPEKKVVATDDARRFAESCDIELFETSAKDNIGVNEM FHSITRQVLRDKIQTDKQEDEQKKATIKLIKSNKSKKRKCCR" misc_feature 1082..1675 /gene="LOC106084417" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 1118..1141 /gene="LOC106084417" /note="G1 box; other site" /db_xref="CDD:133310" misc_feature order(1124..1144,1271..1273,1433..1438,1442..1444, 1523..1531) /gene="LOC106084417" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133310" misc_feature 1193..1195 /gene="LOC106084417" /note="G2 box; other site" /db_xref="CDD:133310" misc_feature 1205..1213 /gene="LOC106084417" /note="Switch I region; other site" /db_xref="CDD:133310" misc_feature 1262..1273 /gene="LOC106084417" /note="G3 box; other site" /db_xref="CDD:133310" misc_feature order(1268..1273,1319..1324) /gene="LOC106084417" /note="Switch II region; other site" /db_xref="CDD:133310" misc_feature 1433..1444 /gene="LOC106084417" /note="G4 box; other site" /db_xref="CDD:133310" misc_feature 1523..1531 /gene="LOC106084417" /note="G5 box; other site" /db_xref="CDD:133310" polyA_site 2545 /gene="LOC106084417" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtagacaat gacgcatttg aagggaaaat cataaagaaa taaagaagaa atataaaatt 61 caaaattagt gtaaataatt ttaacggcgt taagaacagc gaatatacat cgaaattgtc 121 tcaacagatt tttcgagtga acaccgagca gaaagtgaaa cttttcggtg gaaactaaaa 181 aacgattagc aaaaaaagaa gggagttcat caattgcaac aacaatctgc aaagctaagt 241 atagtcgttt ttaaacaaca acacagcaca agcgactcac ttgacagcag ctgcatcagc 301 tttttctatg gtcatagggt attggggatt atggccagga gttagaggaa ttgaacaaaa 361 atagaggcaa caacaagctc tgcgcaaaga agttttcaaa aattctgaac ctgctgacaa 421 aatcgatgga caaagttttt tttttaattt gaaaatccat tcgtctttac atcataagaa 481 gtagatccac tacgaaactt ctgcaagctg cgttgttgta aagaatatca taaaaccacc 541 gattatacac tactctttca tggaacatat taccggctat ctaacgccct aatccctgaa 601 cattgtatag tgtgcaagaa ctagaacgaa aataatttaa aagcgagaaa gcaaaaagcc 661 caataagata tgaacaagta attttcttat caatcccaca gtcacaaaag caaatcatac 721 cccctaaaaa taccgtacag aacggaaaca atcttatgta ttcatttgaa cacaattcta 781 cttctgtatt gcattggtta tatgtacaag gaactgcata ataccccaat ttaaaaggaa 841 ctttattcgg tacattattt tttcctgaag gcgtatagta aattctcgta ccaagtcttc 901 ctccagagta tactgtggag cattatttta gtacatagcg taatacttgt gatttgacaa 961 tatttcggac tggagcaaca aacctcgact catcgcaaca gataaacatt tgttctaccg 1021 ccctccacaa ctagccgaaa agccaatacc accattaaca taatcggttg ccaccatgtc 1081 tcgtggtttt gatcatttat tcaaactttt aataatcggc gatagtggtg ttggtaagac 1141 ttcgctgctt ttgcgattct cggatgacgc ctttaatgga tgtcacataa ccacaatcgg 1201 ggtagatttt aaaatacgaa ctttagtcat tgatgaaaag cgtgtaaagg tacaaatctg 1261 ggatacagct ggtcaggaac gctttcgtac aattaccagc acttattatc gtggaacaca 1321 tggcgtcatt gtggtctacg atgtaactga tggaggatcg tttaaaaatg tgcgacgttg 1381 gttagacgaa attcaaaata actgtggtgt gttaaacgtt atattagtgg gaaacaagaa 1441 cgatgatccc gaaaaaaagg ttgttgctac cgatgacgct cgcaggtttg ccgaatcatg 1501 tgatatcgaa cttttcgaaa catcggctaa ggataacatt ggggttaatg aaatgtttca 1561 ctctataaca agacaggtgc ttcgggacaa gatacagacc gacaaacagg aagacgaaca 1621 gaaaaaagct accattaaat taatcaagtc aaataaatcg aaaaagagaa aatgctgcag 1681 atagacgcaa ggaaccacgc ttgtaatata acaaaaatcc gccaaaaact attggcatta 1741 tagcttttag agaatttatt tactcataag atatttaatt aaaatttctt agcaaggaat 1801 taacaaattt tccacaggtt attaaaagaa attatgttat atacctatat gtttatttct 1861 tttttatttt taaatatgta tttgtatgta ataaattgcc tctaacaaat ttgtagacaa 1921 tttttttatc ttcacatatc tgaggctaac gaacaatacc aattcattgt cccggcacgg 1981 gatagctgtg agcaccacac aggccgaaaa atgtggtgtt aattgctgtt acgagaagct 2041 tagctgcgag ctaccgggcg cgtccacaag ctgcggatag tagaatgctc catacggagg 2101 agctgcaatt gcagccgtgg acaatcgagc ggagagtctc agtgggaggt cgggcggcac 2161 cggctcttgc acaattactg agtgcctatg gccctcgata tggtgccttt aaatagccga 2221 tagccaccct gttaccgcag cgatctgtcc tttggaccgg aacttacagg agcttgacga 2281 ggattgacac ctccacatga aatgaggatc gatacctgcc ttggcggtca acatgatgta 2341 aatattattg accttggcgg tcagaaaaaa gtgtaaagcg ccgccggcga aaaaaaccca 2401 ttttgctcaa aattgatgaa aagagtaaac ttctaattaa atttgttgaa aaggcatagg 2461 aaaaattttg atttattgga aaaataatgg agattacata tatttacgaa attattaata 2521 aaaaataaaa tttatattgg aataa