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PREDICTED: Stomoxys calcitrans mucin-2 (LOC106084413), transcript


LOCUS       XM_013248084            7440 bp    mRNA    linear   INV 02-SEP-2023
            variant X7, mRNA.
ACCESSION   XM_013248084
VERSION     XM_013248084.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248084.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7440
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..7440
                     /gene="LOC106084413"
                     /note="mucin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:106084413"
     CDS             1280..6160
                     /gene="LOC106084413"
                     /codon_start=1
                     /product="uncharacterized protein LOC106084413 isoform X3"
                     /protein_id="XP_013103538.2"
                     /db_xref="GeneID:106084413"
                     /translation="MHFLKQQQQKLRLKSINGYYQPAGPLISAHVIQPVTAGPQPIPP
                     NVPLLPTTNTKLKTLSTNAEGESTSLSANTGTAEGPDTELLLTGGDLTPYRYPPHNGN
                     GSGSAAAAAAAHHSQQQQHQLHQQAAAHAAAAAAAAAAAAHQSSPYPRSIHTPMHYST
                     PYPSNYYSPYPSEPVCYSPPAYQPYFPTKVYQSAPPPSHHSAYRRYPYYPPGHPPPPA
                     DLYEQSPPPPSTAGPTGPPPVTGPPPPSQAGQHPSSTAPGGNQLVPTGPSGHSQHLEH
                     YSGPPGYYPGYGTGGAAAGQCYTRSIQAPYMEYPPQCPCPMQQSCPKNVHTGPHIGSN
                     SINRTHNASSNNNSSSNNSTLANLSGNTTTITTNSSATIVNHCNSNSKCSNLNVSTSM
                     QHNSSNKPTMSDTSTVNNSSSNRNNNNSITATMILNANNKHNNSNNSEVNSNRGPVKN
                     LKNATETQIETSNKHVNDNVPLLSVKTELSSDDTDNKSQYEENVVTPPTPPGAFSTNE
                     DKLKDSSDKDTAIQDVEESTDKLQTTNAMTVASPTPIEAYDLTTTTPPLAASAGSAAM
                     PPVKNSTQSTQHTMTVGRRARIGKSMAWNMVYAGAATHPTAANPVPTNLSNPALPTQA
                     CLPGRTGSQPVSPLHIATSPTSTATVASTVLRRPTATHSDHGSTSPEHNVNGLLGKTP
                     TPTTFFVNNVITKQEIVEVQAPLLLKAEIKSEKIKLEDDILDTMLLQHSNVAQHQSHG
                     CQQSPQKHIIPEKNELKIIKAEPITLSEILHESKVKIEQDCEILTPSVSKDSPLEQRP
                     ERRTELLVPKTQGRMRLLPSWQQPIHATPPPLPAVNCDIDLSTTSDDEVLDLCHSPVT
                     GCSSSSASQPNSGKRMKILEFNKNQCKKSPPNSYKSLIKQAEPKMYLCLSRKFEKKSR
                     SGRIHSFKSNKGSALNNGMRRRELLLTDQQKESLRLRKKKLAAMEKRRRESKELKRSE
                     LRLKRKCTKESKTTNTDKLSIKGENSELEDIKHNCGKVKAEHDVIDLVEDEEVDELVK
                     NKDNDGIALKEVSVATNKEDIVVGRVPTASPKPSPKRGKPPKKPAIPMHLIETIDAVA
                     RGYFSEPECRTACSPGPSDLHRINTSTEEKETSRKPLALKMQKKTKTTLEKRSKSETK
                     KPLNAHTDILTSGCLIREQLARPLLDTAQSLTTSKSMEKLSTPTGVALDGGVSLEMAS
                     GENIQKSATKVRTKETKPNIIREKKQKKCTQLFKKSKAPAEANTMVKDSILIKENQLS
                     GLSLEANNNGYHLEKPKEAQNLPEKSDNLLVESTKSAENLLSFLPGAVENSTNFTFNA
                     QTPPSILLMDPLVFNATGATSSNIVAPASASPTPLQSQHSNGTIQPATTPVFLPPMPR
                     VVCHSHHQHGVKRNRSRSKFGSRKRQKLKHSTVSFEVDETLPPAPRMDVVPKWNNGWT
                     WEGKQFQGAVFLNSDDPLVIRTCYPAMRHLEGDIIRTRDCVLLKANEDNELPYVAKVA
                     HLWENPEDGEMMMSLLWYYRPEHTEQGRQLCDSPDEVYASRHRDHNSVACVEDKCYVL
                     TFSEYCRYRRRLRAAEEDIEDVNIVPKRPNYYSIRIVPDNTNPELVMFCRRAYEFRTR
                     RLLKMPNKQDYYVVNS"
ORIGIN      
        1 caagttccga gctttgatac ctaccaattc tagttgccat acccacttaa actgaatgcc
       61 tcggtcttcc acgctgtggc aaatctgcac cttccgttta aagtttttta aaaatgcttc
      121 aaccaaattg accgaatttg gcatatgagg ttctcagtga aataaatttt cctgcaggaa
      181 attgattact tacgtggacg ttctggcttt ctaactatta aatggccagt actggtatat
      241 gggcgctgta ctaatatcac gacctgcagt gaaaaatttt ccaataagtt ttttatcatt
      301 ttcgttcatt gtcgactatt gcgctgactg acaatacgat tataaaaaaa atgctgctaa
      361 cattttgaac ttgtttgtaa tgtcatggat atgtgaattg gtctcttatt gagaaaatac
      421 ctaaatacac cacaccattc attgcgactc actgccacat gaacagcaaa acgcctcaac
      481 acaaccctga aatgcgaaac accacgaacg ctcagtgctc accaaattat gccaaacaaa
      541 ataaaagaga ataatccaac aagaccatta aaattttctt agccaataca agaaatagca
      601 gaatagcaga gatgttagtg gacacaaaaa gagcgatttc ttcacctttc ccaatacgaa
      661 ggagattatc tcttgtgctg atagcacacc ataccaagtg tgacaccact acaggcctct
      721 caattggaga acagagagat acaacaaaat gagaaaaact cacggatacc gatttcaagc
      781 gtttcttatg gaatcttcta tggccgaaat ggtttagtat tgctctacct gtcgtctcgt
      841 taacaacaac ttaacaatag gaacggtcgt gtgtgacgtt gatttttagt gctctcagca
      901 aaaaaaaaga aaataaatgt gaaacaaaaa gaagaaaacg agcaaaattt gaataaaaac
      961 gatatatatc tttttgtttt tgtttccctt ttgagttgtc cttaaggtgt tgtggtttac
     1021 cactgagcac tatatcatac aaaaaataaa tcgttttgtg agtgaaggct taagttacgc
     1081 gtaaaaaatg cttcccctaa cttaaaatta gaataatata aatattgtat tataatagaa
     1141 atagtgaaag ataaaaaaag caatgaaatt gtcttattta catgcaacaa catgaagtta
     1201 atgtgataat gtgtcattgg ggttttgcta agccacttgt gaaacaaaat caatcatacg
     1261 ctcgtagtaa aagtgtaata tgcattttct gaaacaacag caacagaaac tacgtctgaa
     1321 atctataaat ggttattatc aaccagctgg tccattgatc tcagcgcatg tcatacagcc
     1381 agttacagct ggaccacagc caataccacc aaatgtgcca ttgttaccca ccactaatac
     1441 aaagcttaag accctatcaa caaatgccga aggtgaaagc acgtcgctct cggcaaatac
     1501 tggaacggcc gaaggtcctg atacagaact cctgctcacc ggcggcgatc tgacacccta
     1561 tcgttatccg ccccataatg gaaatggaag tggctcagca gcagccgcag ccgcagcaca
     1621 tcatagtcaa caacaacagc atcaactgca tcaacaagca gcagcacatg cagcagcagc
     1681 tgcagctgca gcagctgctg ccgctcatca aagctcaccg tatccccgat ccatccatac
     1741 tcccatgcac tactcaacgc catatccttc gaattactat tcaccatacc ccagtgaacc
     1801 agtgtgttat tcgcctcctg cctatcaacc gtatttcccc actaaagtct atcaaagtgc
     1861 cccgccacca tctcatcatt cggcctatag gcgttatccc tactatccgc caggacatcc
     1921 gccaccgccg gcagatttgt acgagcaatc accgccacca ccatcaaccg caggtccaac
     1981 cggaccgcca ccagttacag gcccaccgcc tccgtcacag gccggtcaac acccatcttc
     2041 gacagcacca gggggaaacc agcttgtgcc aaccggccct tctggacaca gtcaacattt
     2101 ggagcattat tctgggccgc cgggctacta tccaggctat ggtacgggcg gtgcagcagc
     2161 aggtcaatgc tatacacgca gtattcaggc tccgtatatg gaatatccgc cacaatgccc
     2221 atgtccaatg caacagtcgt gtccaaaaaa cgtccatact gggcctcata ttggtagcaa
     2281 cagcatcaat cgcactcaca acgccagcag caacaacaac agcagcagca acaacagtac
     2341 attagccaat ctcagcggca ataccaccac catcaccacc aactcatcag caacaatagt
     2401 caatcattgc aacagcaaca gcaagtgcag caatttgaat gtctcgactt caatgcagca
     2461 caacagcagc aacaaaccga cgatgagcga tacgagtacg gtgaacaaca gcagcagcaa
     2521 ccgcaataac aacaacagta taacagcgac gatgatattg aatgccaata acaagcacaa
     2581 caacagcaat aacagcgaag tgaattccaa tagaggccca gtaaaaaatc taaaaaatgc
     2641 aaccgaaaca caaatcgaaa catccaacaa acatgtcaac gacaatgtac ccctcttatc
     2701 ggtcaaaact gaattatcct ccgacgacac agacaacaaa agccagtatg aagaaaatgt
     2761 ggtcacaccc ccaactcccc caggcgcctt cagcacaaac gaggataagc ttaaggactc
     2821 gtcggacaaa gatactgcca tacaggatgt ggaggagagc acagataagt tgcaaacaac
     2881 taatgcgatg accgttgcta gccccacacc tatagaggct tacgatttga caactaccac
     2941 acctcctctg gcggccagtg cgggaagtgc agcgatgcca cctgtcaaga acagtacaca
     3001 atccacacaa cacacaatga cagtgggtag aagagcccgc ataggtaaat caatggcttg
     3061 gaatatggtc tatgctggtg ctgcaaccca ccccaccgct gcgaatccag ttcccacaaa
     3121 tttgtcaaat ccggctttgc caacgcaagc gtgtttacca ggacgaactg gctctcagcc
     3181 cgtatctcct ttgcatatcg caacctcgcc tacttctacg gcgacagtag cttccaccgt
     3241 cctaaggcgt cccacagcga cccactctga ccatggatca acctcgcctg agcataatgt
     3301 caatggcctg ttgggcaaaa caccgactcc taccacattt tttgtcaata atgtcataac
     3361 caaacaggag atcgttgaag tacaagcacc actgctgctg aaggccgaaa tcaaatcgga
     3421 gaaaataaaa ctcgaagacg atatactcga tacaatgttg cttcaacaca gcaacgtagc
     3481 gcaacaccag tcgcacggat gccaacaatc tccgcagaaa catatcatac cagagaaaaa
     3541 tgagcttaaa atcataaaag ctgagcccat aacactcagc gaaattttgc acgaaagcaa
     3601 ggtaaagatc gagcaggact gtgaaattct cacaccatcc gtatctaaag acagccccct
     3661 ggagcagagg ccggaaagac ggacagaact gctagtgccg aagacgcagg gtagaatgcg
     3721 attgctccct tcatggcaac agccaataca tgccacaccc ccaccccttc cggcggttaa
     3781 ttgtgatatt gacttatcga ctacgtccga cgacgaagtg ctcgatttgt gtcacagtcc
     3841 tgtcactggg tgctcctcat cctccgcatc tcagcccaac tcagggaaac gtatgaagat
     3901 tttggaattc aacaaaaacc aatgtaaaaa atctcctccc aatagctaca agagtctcat
     3961 caagcaggct gagcccaaaa tgtatctctg cctgagccgt aaattcgaaa agaaatcgcg
     4021 aagcggtaga attcactctt tcaaatcgaa caagggcagt gcccttaata atggcatgcg
     4081 cagaagggaa cttctgctaa ccgatcaaca aaaggagagt ctacgactaa ggaagaagaa
     4141 attggcagct atggaaaaac gtcgcaggga gtctaaagaa cttaagagat cggaattaag
     4201 gctaaaacga aagtgcacca aggaatccaa gacgacgaac actgataaac taagtattaa
     4261 gggcgaaaat tctgagcttg aggacatcaa gcataactgt ggcaaagtga aagcagaaca
     4321 cgatgtcata gatttggtgg aagatgaaga agtggatgag ttagtgaaga ataaggacaa
     4381 tgatgggatt gcattgaaag aagtctcggt ggcaactaat aaagaagata ttgtcgttgg
     4441 tagagttccc actgcctctc cgaaaccttc ccccaagcgc ggcaaaccac caaagaaacc
     4501 agctataccc atgcatttaa ttgaaactat agacgctgtg gcccgaggct acttctccga
     4561 gcccgagtgt cgcacagcat gttctccagg accatcagat ttacacagga tcaacacaag
     4621 cacagaggaa aaggaaacat ctcggaaacc tctggccctc aagatgcaga agaagaccaa
     4681 aaccactttg gagaaaagat ccaagtcaga aactaagaag ccacttaatg cacataccga
     4741 tatcttgaca agtggttgcc ttattcgaga acaactggct cgaccattgc tagacacagc
     4801 tcaatcatta actacctcaa aatcaatgga aaaactaagt actcctacag gggtagcctt
     4861 agatggaggg gtctccctgg agatggcttc aggggagaac atacagaagt cggcgactaa
     4921 agttcgcaca aaagaaacaa aaccgaatat tattcgggag aagaagcaaa agaagtgcac
     4981 acaacttttc aaaaaatcaa aagctccagc ggaggccaat accatggtca aggactcaat
     5041 acttatcaag gaaaaccagt tatccggttt gagcttggaa gcaaataaca atggatatca
     5101 tttggagaag ccaaaagaag cccaaaatct cccagaaaaa agcgataacc tccttgtaga
     5161 gtcaacaaaa tcagctgaga acctgttgtc attcctacct ggcgccgtgg agaactccac
     5221 taactttaca tttaacgctc aaactccacc atccatattg ctaatggatc ctcttgtttt
     5281 taatgcaaca ggagccacca gcagcaacat tgttgcacct gcatcagcat caccaacacc
     5341 gttacagtca caacattcca atggtactat tcaacctgca actacgccgg tattcctacc
     5401 tcctatgcct cgtgtggtct gccactcgca ccatcaacat ggagtcaagc gcaatcgatc
     5461 acgttccaaa tttggcagtc gaaagcggca aaagttaaaa cattccacgg tgtcatttga
     5521 agttgacgaa acactgccgc cagctccgcg tatggatgtt gtgccaaaat ggaacaatgg
     5581 ctggacttgg gagggtaaac aattccaggg tgctgtcttt ttgaatagcg atgatccatt
     5641 ggttatacga acttgttatc ctgctatgcg ccatttggag ggagacatta tacgcacccg
     5701 cgactgtgtc cttctaaagg ccaatgaaga taacgagttg ccttatgtgg ccaaggtggc
     5761 ccacctctgg gaaaaccctg aagacggtga aatgatgatg tctctcttgt ggtactatcg
     5821 tcctgaacac accgaacaag gccgtcagtt atgcgatagc cctgacgaag tatacgcctc
     5881 gcgccatcga gatcacaatt cagtggcctg cgttgaagat aaatgttatg tcttgacctt
     5941 tagtgaatac tgcagatatc gccgaagact tcgagcagct gaagaggata tcgaagatgt
     6001 taacattgta ccgaaacgac ccaattacta cagtatacgc atagtgcccg acaataccaa
     6061 tcccgagttg gttatgttct gccgcagggc ctatgaattc cgaactagac gtcttctgaa
     6121 gatgccaaac aaacaggatt attatgtggt gaactcctaa agcacacatc gcagctatgg
     6181 ttccaacaca aatgataaat gcatgggaaa ctttaatgaa aagagatgat cgacgattga
     6241 cgatcgtatg gcatgcatac gacaaaatgg catggacatg aattgttaag gccttttagt
     6301 aaacattaaa caattgttaa cgatacttgt ttttattata ttttcgtgac aaattaaaca
     6361 aaaacaaaaa ttaaaacaaa aaatccttta gaaatgccat ttcgcctaga agctctatat
     6421 gatttgtaaa ctttccggat atctaaatct aaaacacaca cttgaaagga acaaccttat
     6481 tatactaaaa ctaaaggaaa acatagctac taatatacac atatacaaac cgataaaaca
     6541 aacaagcata catcgtacat catacatcaa catactatat agtattagta acaacatcgg
     6601 agagaaaaga aaactttaca caaaatttaa ccaaaatatt taggcataaa ttaatattta
     6661 acacacacac acacatacca tagacaaaca actatgcaaa tttgaagttg tatttatgtt
     6721 ttctaactta tatatagttt tattaagcga aacaaacgaa acccgtgctg aagatgaatt
     6781 atttctagaa ctcttttttg tgtttgtata ttttttaatg ttaagccttt aatggaaatt
     6841 ctaatttcat ttaatggcaa ctcccattta agtttaaaaa ttttattttt tttttttgga
     6901 aaccagacca aattgtttta taaacaaaaa aaacacaaaa ttattttgca agaacacaaa
     6961 caaaaacaat gatttaaaaa atcgaaacta tattcattta aaaactattt taaatttata
     7021 aaacgattct taaaaatatt ttaaaaacaa aacaccctta aagaacgact actttcgctc
     7081 atcaatgcgt gaatagattt tgcaaaaaca aaactaaatg tatgaaatca tgtacatcat
     7141 ctgcatccat tttatgacat tgtatttgta acatttcgct ctaaaacatt atttaatata
     7201 tttatttatc cctgagctta aaccaagcac ttgagtagtt taaattttaa ttgttttaat
     7261 ttggaaacct atttacatac ataatacaca cacacacaca gacacacatt gacacaaaaa
     7321 atatataaat acttattaga aatgcataca ttattttatt tattcaattc ttatatgatt
     7381 tttgatatat ataaatatat gtataaacat ccccatacat gtgaaatatt tttgataatt