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LOCUS XM_013247902 3344 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_013247902 VERSION XM_013247902.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247902.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3344 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3344 /gene="LOC106084316" /note="protein 60A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106084316" CDS 1708..3090 /gene="LOC106084316" /codon_start=1 /product="protein 60A" /protein_id="XP_013103356.1" /db_xref="GeneID:106084316" /translation="MLRRNKQRTVQCSTILRTIWSSKSTLCFMSLISMFLGMSLMVCV GLNPFCSSSVLVSASQSGIYVDNGRDQTVVHHILDEEEKMAAAYDILEFLGLPDRPRR KHGHLSLRKSAPQFLLDVYHRLKEEENEDEPPTSVRSKRDLQEQENFITDLDKRAIDQ SDIIMTFLNKNHHVDEIRHEHGRRLWFDVSEVPEDNYLMMAELRIYQNPAQGKWATSG RDFTINVYSIVNTNGHDLDLELLSSVNTTADYQGWLEMNVTEGLSVWLRQPKENNKGL YIGAHPLHKPEREIKLDDIGLVHPKGDDEYQPFMIGFFRGPELLKQGNKHHSRRKRDT HSRRKKKSDMGNPLMDGPGEGTRSCQMQTLYIDFKDLGWRDWIIAPEGYGAYYCSGEC NFPLNAHMNATNHAIVQTLVHLLEKSKVPKPCCAPTRLGALPVLYHLNEENVNLKKYK NMVVRSCGCH" misc_feature 1906..2646 /gene="LOC106084316" /note="TGF-beta propeptide; Region: TGFb_propeptide; pfam00688" /db_xref="CDD:459906" misc_feature 2779..3087 /gene="LOC106084316" /note="transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic proteins BMP-5, BMP-6, BMP-7, BMP-8A/B and similar proteins; Region: TGF_beta_BMP5_like; cd13761" /db_xref="CDD:381639" misc_feature order(2797..2799,2803..2805,2815..2820,2824..2826, 2854..2856,2860..2868,2872..2874,2917..2922,2929..2934, 2938..2940,2950..2952,2968..2970,2977..2988,2995..2997, 3055..3063,3067..3069,3085..3087) /gene="LOC106084316" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381639" polyA_site 3344 /gene="LOC106084316" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attcagctct cagtttattg ctgaagcttg gagagtgatg cacggactgc atacaatttt 61 ttgttttgtt tggttttttt attaataaaa actcacatta atacaccaat atttgtaatt 121 taaaacggaa aatcgcattt tagtaaaatc ccaacaagtt aaagtgcaaa aagaaattgt 181 ttaagaataa aaaatacaag tattgcaaga gaatcacaaa agaaatccgt aaaataccta 241 caccagacac cgcgaagaca aaaaccagtt tgttctcgaa attattgaga aaataagaaa 301 aaaaaataaa actaaaaaaa gattgagaaa aagaagaaga agaaaaaaaa cacaaacaaa 361 gctcttcttg tgtaaatatt ttgcatgtct tttggcttga tgtgagtgtt tgttgtgaac 421 gaagaatatg ataatgatga tgaggaacaa ccgaagtgga tagatagaca gtcaaggaga 481 gacaagtcga gagcaaaacc cccttcaaaa agagctaaag aggcatgaac agaactgagg 541 ccagataaat gcgagatcaa ctggcaagaa atcttcaaat tgaagcaatc gacggtttgt 601 ccgatgaccg aaacaatagc agacaaccgt acatgcatac aaacacacac acacacccat 661 acttacatac acagcaaaca catatcaaac aaatcttaac gcatttcttt taattgaata 721 aataagcagc ctaacaaagt tttctatata aaaattaatt aaacgaaggc atattgtcga 781 ttattgctgc tgcaaataag ccaagttacc ctccttcaaa aataagcacc acactacata 841 cggccgtcca agaaatcgaa tttaaatttc acttaattac aaccaaacaa ctgctgtgtt 901 tttatctagt aaacgaggat tggaattccc ttcgtactgc ccagcccaac ccacttcagt 961 ttgtatttgt catccgttgt ggccttgagg cttcccagaa atcgtcgcat ttcaatttca 1021 cgcttgccac ttgcctgctc tttgcctacc ggccacttgg tgcggtaaat cgttggtcca 1081 cccccactgc ttgcctgctt gaacgtgtga agaatttatg aagattccgc aattgaatgc 1141 taataaataa tgtgcgattt ctaaacaaat cgggaggcag cagtcaacat aacaaaaaga 1201 aataagtacg tgcaaattta gagagagaga gaaaaaaaaa agaacaaaca tcggtgaaac 1261 atttcaatgt aaacattcaa acccctggaa ccggataatc tacaaaagca gcggccatca 1321 gtccagccac ccaactactt aaaatactca tacatacgcg tttgatacac acgtcaacat 1381 caacaccacc accaccgcct gccgtactgg ccttccccca acaccaagta ctgccacgat 1441 caattagtgg aggagcagca gcagggcgca aatatcaatc cgtacaatac acgctttcgc 1501 gctataactg ttattacatt tcatattgaa cactgcgtca tagccctgtg ggggatacca 1561 aataagcaaa acttttaggc acgagtatag agcttgcctc aaatttgcca ggactacgat 1621 cgcatagaaa tatatggcaa attaatgatc gtgaaaagaa ttcgatcata ttacctgcag 1681 acatacagtt gttcgaaata acgcaaaatg ttacgtcgca ataaacaacg cacagtgcaa 1741 tgcagcacaa tcttgcgcac tatatggtcc tcaaagtcaa cgctgtgttt tatgtcgcta 1801 atctccatgt tcttggggat gtctttaatg gtttgtgtcg gcttaaatcc gttttgctca 1861 tccagtgttc tagtgagtgc tagccaatcg ggcatttatg ttgacaatgg gcgagatcaa 1921 acggtggtgc atcatatact cgatgaggag gaaaaaatgg cagctgcata cgatattttg 1981 gagtttttag gattacccga tcgtcccaga aggaagcatg gacatttgtc tttaaggaaa 2041 tcagctccac aattcctttt ggatgtctac catcgactca aggaggagga aaatgaagat 2101 gagccgccaa cttcagttcg ttctaaacgg gacctacaag aacaggagaa ttttataaca 2161 gatctcgata aaagagcaat cgatcaaagt gatattataa tgacattttt aaataaaaac 2221 caccacgttg atgagatacg tcatgagcat ggacgtcgtt tgtggtttga tgtttccgag 2281 gtacccgaag ataactatct tatgatggct gaactgcgta tctatcaaaa tcctgcccag 2341 ggtaaatggg ccactagtgg cagagatttt accatcaatg tctactccat agtcaatacg 2401 aatggccatg atctggattt ggagttatta tcctcagtga acaccactgc cgactaccaa 2461 ggctggctgg agatgaatgt caccgagggt ttgagtgttt ggttgcgaca acccaaggaa 2521 aataacaaag gactatacat aggagctcat cccctgcata aaccggaaag ggaaattaaa 2581 ttagatgaca ttggtttggt gcacccgaaa ggcgatgatg agtatcagcc atttatgatt 2641 ggcttcttcc gtggcccaga gctactcaag caaggcaaca aacatcatag tcggcgaaag 2701 cgcgacactc attcacgacg caaaaagaag tctgatatgg gcaatccact aatggatggt 2761 cctggagaag gtactcgaag ttgtcaaatg caaacactgt acattgattt taaggatcta 2821 ggatggcgtg attggatcat tgctcctgaa ggttatggtg cttattactg cagtggtgaa 2881 tgcaatttcc ctctgaatgc ccacatgaat gccaccaatc atgcgattgt ccaaactttg 2941 gtgcatctct tggagaaaag caaagtgccc aagccctgct gtgctcccac ccgattggga 3001 gccctcccag tactctatca cctgaatgag gaaaatgtca atttgaagaa atacaaaaat 3061 atggtagtgc gaagttgtgg ttgccattag agaaacaaaa aaacaaacag agaagctaga 3121 tgtgaaatta ttctgagatt aaatttaagc catattttgc gtaacaaatc taaagattgt 3181 aattgtcgaa ttctacttaa atgaacgatt tttaaatgtt tttttataaa tttttgtgaa 3241 aaaaaaatta ttctgtggat atgaatataa aacttaacta aattgacaag gtacaccatt 3301 gtaatagtat acaaaataaa aatttgtttc agttctcaaa caaa