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LOCUS XM_013247898 8566 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X6, mRNA. ACCESSION XM_013247898 VERSION XM_013247898.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247898.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8566 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8566 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2046..7340 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_013103352.2" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 8566 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attcgttata atttttgctc ggccatgtta cattcgcgat tcagaaaccc aatcgcgtaa 61 aaatatttta tttttttgtg ttttgaaaga aatctaaaag aattaaaact caaagcaaaa 121 gtggaacttt aacttggagg attcagtttg tcaaatactg aatgaaagac aagccataga 181 tatatgagag gacaacaaca acaacaaaag caaaatccac aaacaatttg gggctagaaa 241 ataaacgcaa agaaaatcaa atcttaattt ttaaattaag agccaacaaa aacaagaaaa 301 acgagcaaaa tggttaatta aaaaattaaa agaaaacacc aacagcaaaa atttgcattg 361 caaacaatgc aaaaatcaca caagaacaac cacaacagca acaataccac cacaccattc 421 tagaaaaaca aacatagcac agcaacaact gaaaacgcag acaacaacaa caacaacaac 481 ataaagataa attcgattgc aacattgtat taagttttca cctacataac aacaagaatc 541 cagacaaagc tagaccagct cacccaagcc agaggaatag aataacactt aatggtgttt 601 taatagccaa caagtttatc tccccccccg cctagttaat taattgattt ctgaagtgaa 661 accagagatt ttgtcaacaa tttttctgtc tagctgaggc cattgcacca acaagcagca 721 tcctccgtca ccactactgc tactacatca taaaagtcgt ggctttatta attgtgctgg 781 gaataagttt ctgttgagga cacaccagca atgctcgtgg tcaagataca catccaggcc 841 ataagcacat aacgttagat gttgttgttg tttccttaaa gttttcggtt gaatttttta 901 attttgtgtt accacaattt tggtttggat atttttttcc tagcgaagaa gcagcaagca 961 gtcatacaac cagtcaattt agcctccagt ttattctaaa aggcggtgca agcagatagg 1021 cttaaccaaa aggggaaatc ccacaacttg aaccaaggaa taaacgacga acacagattg 1081 ctaaagggcg gcttatatac acaaacagca acagtttgtc attatatgta tgtgagaaaa 1141 aatgttgccg cataaactag aatatattgg gaaaaatgat tcgctgaaca tggaaacgtt 1201 ttgggaagct gctttgtact ccgttgctgc ctctgccgcc gccgctgctg ttgtttcagc 1261 tgaaaggact gtcgctgctg ctgttgttga tactgtttgc caagcataca aggcccactt 1321 gctgccacca agtgttgcaa tagctactca cagtgttgct gcaaactttg ctcacaccac 1381 aacatatgac gatcaacaat aaatcaatcg aaagaaaaca aaaaacaaag aacgccaaaa 1441 tccaatccaa aatccaacaa caacaacaat taagaagaac atcattctga tacgcaagat 1501 tttagaagaa aatccttaca gcaacaacaa aaaagcgtta atcaataata ataattaaaa 1561 tataggcaaa acaaaaaaaa cgagaagtca cctttaactc aaccaaaaag ccaaaacaac 1621 aaaaaattat atcaccttta aaacacccct tcccctacac gagtaaaacc atcactggtt 1681 cacaagtaat tgtatatttt tttttgctcg cacaagtaag tgagaaaatc gaaggccgca 1741 tttctctaca tcccattaaa attattcggg tagtaaagta tagaagcttg cagtctcaag 1801 aagcagccaa cgaagattat ctagctgtgc agtttcaaaa aagtcaatca gtcagtctgt 1861 ctgtcagccc attgtggaca aaatcatttt tagacccttc agctacagag atcatatgat 1921 tttgttgtat tcacaaggac ttggacaatt tgttggcata ccaacatcac cctcactact 1981 tggcagagaa aagcaggata atccaataca gcaatttcag caaaattctt gtcaaaagaa 2041 caggtatgaa gtatcctcaa ctagtatcgc ctcgtgccgt gaacgccatc tctgattggt 2101 tagtatcacg tttggagcaa ttaggcgtcg aatcacccca gatctataca agacttctac 2161 tatctctctt acaatcgtca gttcaagtaa acgatccaat tgaattcagc aacttggaag 2221 catttatcgc taattacaaa ggtgggcata gcaaacgttt tcatttaccc tccgatacgg 2281 agactctaaa aaaattaaat gctgttcagt gtttaaggga gattgtgtcg accgaacaag 2341 agaccgctgc tattgaaaga ctagtcgatg aactgtgtga aaaattaaag gatattgaga 2401 aacgtagtca agaacttaat gatgaggaac gctttctaat cgacaccaat ttgaacattg 2461 aatcactacc aacgaccagt gagggcaata gccatcaatt aacgcaagag caggacccaa 2521 agcagcagca gcagtcctca gtgattggtt ttgatcaaca gcatcatttt tgccaacagc 2581 atattttgcc cgcgtcgtct tcgcaggttg ccgcttcgat tgccatacac tctcgtcgtc 2641 tagtgccacc aagtaatgaa aatgttttaa acgacagcga caacgatccc aagaaacgct 2701 atttccgtgc ctttcctgca ttgtcgaagg aaatggaaga ttccttccgc atatggcgtc 2761 gtaatgcaaa atctttaact tggccagttg tgggacgtgc ttcttcttca attattggtg 2821 acactgttcg tgtccacaaa tccatagact ccagtagcgg taatttatac gccgaaagcc 2881 gtagcgcatg cgagaaaggc attgaaaaga gattgaaggc ggctagtggt ggaggtgttg 2941 tcgatcctgt ggagggtttt caaacacata aaataaggcc agaggttggc gcaggagata 3001 ttagtagtgg cagtgtggtg gcagtggatg ccattggtgg cgaagttcaa ggagcagcgg 3061 caagtgcaaa aaagaaatct aaacgtcgcc gtaatcaagc tttgtgcaag ggtaagccca 3121 tccagagtat acgcaataaa gccccagctg gtggcagcaa ttctaatacg tgtggctcag 3181 ccagtgtggc aacggctggt ggcggtggtg gtaaattcta tagtcaacac caaaattatc 3241 gcaacactac cccagcttgg gacactgatt tcaaagggtg ctgggaaatg gggccggatc 3301 tgattaagga gtttttggcc cgccaaaagg gagccactaa acgcagtcgc agcaactccg 3361 atagcttgga tcaagagatg cgtaacgaat ataagatgct taatgaaatg cccaaggatg 3421 atgaattgct tggcggtata gaacgacctt tgatgaagcg ctacatagat ctaacttttt 3481 gttgtggtga ggacgatgaa cgcgctaact atgaagtgtt ggaggacggt gttgattatg 3541 ttgatgagga ctatgatgat gagaacactt tggcttccat agaagagctg acggccagtg 3601 gtgttggtgg cggcaatggc aatgctcgac gtttgtatca gcgtgagggt aaattgcaga 3661 aacctctggt gatttgcaac cccatagaag agaatgacat ttttgaagag acctcggact 3721 cggtggacaa tttagatttt gccaatttca aggccaaatt caacagcagc gttgaggctt 3781 tgtggaaaga tgcagagccg cctatgacaa acaactcgac agccaactct agtgcttacg 3841 gtcaggttga gagtggtgtt gccgctgctg ctgctgctgc caaagccaac acaattggaa 3901 tttcttcggc tttttatgcc accacctcgc taaatgcttt ggctccattc aaacaggatt 3961 tgtggaactt ctggtccaac tacaatcaac atcactacga ccagatgacg aaattctcca 4021 acaccacttc aaccgcatcg tccatgacga tgccgacaac gacaacacgt ttagatgata 4081 gtagcgctag ttctggcgct ggcgccgata ttgcaaattc aagtgattac ttctcaatgc 4141 ccagtaattt ggatgatttc gacaagtctg tgggtgcaat gcgtcgcgta aatgaagctg 4201 gtgcttccat gggtgcccac acaccctcga taagtgtatt cttgcagaat tccatttggt 4261 cctcatcggg tgattgtgtt gatgctgttg gtgctgccgc tgccgcagag acggatgaaa 4321 gcttcctcta caaagtgtgg cactcgaata agaaattaag tcaattggat gtggggaaaa 4381 ataaaaacga aaagatggct cacatgggaa tgactgaagg agataatggt ggaaatcgtg 4441 gctataataa ggctaaagaa gccgtaggta acttggaatc aggaggtggt gctaaattgg 4501 aatttcctcc ttacagtagt ttgaagtggt cggaaggaat caatgccggg ccagcttata 4561 ataatttgcg ctctcacatg gcagcagccc ataccgactt ggagagccta aacaaaaatg 4621 atggcaaaat tgttagtttt aattctgctg cgggcacagt aacaggtgcc acctgggaag 4681 ccccggcctt tggggaaaac tcacaacctg acctcaagtc ttggtgcgcc tccaatccca 4741 tgtccctgac cgaaatgtat ggcagcgatg tttgcgatag cataactgaa gaaaatgagc 4801 cgctggaaac tggggctatg gaaacttcgg tcacattgcc caatcactgc tctgccacca 4861 gtggtttcat agcctattct cgcgttaaac aatgcggcct cattcaaccc caaagtaagc 4921 ccttgcagct tcaaagtgcc aatgctgctg ctgctgctgc tgctcacctc tccaatgact 4981 actttcgtgg gggtgaagag gagaaccttt tgacttcgga gcgcacacat tttaatccca 5041 tcgagaccta tgtggatggt cacactttca atattagcag tgctcttgat tcggtggact 5101 ttgaacgcag tgccagcgga tttttgtgct atgattccaa tgaatatttg gaatatactc 5161 gcaacgacat ctatttggcc gacgaggagg tggccaatac gaatttgatg aatttctcgg 5221 ccaccgcttc gtctcagatc actgatggcc gcgtacatgt tgccaaagaa aaaccggagt 5281 gcagggaaat gtttgtgctg aagtttcgcc ttaggcgatc gggagagata gcttgtcaaa 5341 cggaggaaat cgactttcaa ttagccgccg ccaaaatggc caacgatcag ctgccaccca 5401 ttgagagcat ggtggaagtg cctatgtttt cccatacctc gttgactctg agccgacagg 5461 ccaacaatga agccattatg gcggccgtta ccaaagccgt ggctgccgca gccaaagcgg 5521 cagctgaaca gggtctgaat gcaggtcata gttccctcgc ttggataccc gccactcgca 5581 acgattgcac tcagtcctgg gtgcaggatg tctcgctctg tgatgaagta gatttttgca 5641 gagccacagc ctctgccgaa caattgagcc aattttggtc catgcaagag gtggaaaagc 5701 aatgccatca acgccgtttg ccagccagtg cttttcagcg ctccgatctg gagagaacgg 5761 atgacaactc catggataac tcctcgcata ccctgtgggg catgtgtgct gtatgcaata 5821 gttgtgatta cggcaagtct ttgccagcga atcgtctgct gcgagatgaa ttgcaacggg 5881 aagccgatga aataatgagt gatttgcgtt atatgcaaga tctgtatata ggtgaagccg 5941 attcggtagc agatacggtt atggcccatg aagtggaggg cgataggaat agtgaaattt 6001 tgaagaatat agacaatgaa agggaacatc atcatcataa gcagcagcag cagcagccga 6061 atgaagcatc agctgctgct gttgtagatc aagcacaggc ctcaatgttg ttgaaggtta 6121 accagttgat agaggattta cttaggcccg agggaaaaac ggcaaagctc ttcaaggcaa 6181 aattcgaaga aaagccggag acggagacac cagagaaatt gcctgtggct gactgggcca 6241 tgaatatgga cgatgatgct gtagacaatt caagttcatg gcattttggt ggcagtggca 6301 gagcagacac tgccgatggc catgccaact taagcaacat ttggcaacat gaaccgattg 6361 accagaacaa cactgaggcc gaacgaaaac ttgtctgtat gaaacccatg aaactattgc 6421 gccaagtagg aggttccctc aacgaagagg acttgtatgt ggataattta aattgggaac 6481 atgaaaatct ggccaagata tggcaaaggg atacgatgcc cagcgctgac acaacttctt 6541 ccccaaatgc tgcaaaagca gagcataaat tggcccaaag tgaggaaaac ctggaggata 6601 atcggaatat tgtagagcaa aagaatttaa aaaatctaca aaataatgcc acacatacac 6661 cacccacagt ttcttcaagt agcaatagca acagcaatag tgccgccgtg acatacaaaa 6721 gggtgcaaca ttttctgaat agttcggcgg ccaagttaaa attggcggca aatcgcaaga 6781 ggcgtcattc ggcttcgcaa aatttctatc atcatcaaaa ccagcagcaa gtgcagtcgc 6841 agcaagagca aaattttcag tttggccaca gcaatagcaa caataacaac aataacaaca 6901 acagcagcag tgccagtcac aattctaatc aaatcagcag caataacaac aacaataatg 6961 tcaacataac cgatttaaat cgctacaaaa agacaaacga agaggagcta gcactatctc 7021 ttgagcccaa gcaaacaatt atcacctgca aatattggac caccactacg aatggcaccc 7081 aggcctccat ggattccgct gcggcagcca tgatgctttt ggctgccgct gcaaacaaat 7141 ccaacgttgg cggcggcagc ggcggaggca ttatggcaac caccaacacc acaacgacca 7201 cctcaaacac ttacgaagat actaacgatg aaggcatcat gttggaggat aatacatttg 7261 gtaatacctt ttcttgtctt atcgataaaa atgcttctat actgaaacat gtaatgatga 7321 cacgacccct aacacgctaa acaataatac aaaaaaaaaa atgcaaatgt aaatgcaaac 7381 catattctga aactcccaaa gtccccaaaa gagaaacaaa agctacaaac ttaagcggcc 7441 tatggaaaga gaaatagaaa aaaagagaga gagggggcag ccaaactcag aatccaatat 7501 gatgccataa gccaagccct taaattggca tgttgtaggg aggtcaattt ttgagcaaag 7561 aatccaaatc caaatcatgt tttatattcc tactaaaact ttctactata agagccccct 7621 ctctacaata gccgcttgtt ataaactctt aaaaaatttt aaaaaattca aaaaagccaa 7681 aaaaataaca attgtggagt acaatgtact tgtgaacaat gtaaaaatcc ccaccccgcc 7741 ctcagcgccc cagctccctt caaaatcaac atagaaaaac agaaaatttt acttcaaatg 7801 ttcagctcat aaatattttt ctaaaaaaaa gctacaaaaa aaacaatact ttaggttttt 7861 cataacactc tcttacaagc atccccctcc ccacacaaac atgtatattg aaacttttct 7921 aatctgtttt gtttttcttt ttttttgttt aatgttataa attttctctg tataaaaaaa 7981 ttcacagtaa atagtaactt tttctttttt gttgttctaa agaagaaata tttactcttt 8041 tttatctctt acaacatacc catatacata tacctactat tattatttga tgtaccatac 8101 atatactatt attatatgcg gcttattttc ttgtaatttc gtaatttata acagatttat 8161 aaaatttgtt ttctctattt tccccctcct ccaaaaacca ctctattgtc ccttgaaaag 8221 aaaaaaaaac tcaaaaaaaa aacatgttag gttgaaaaaa attttttttt taaataattt 8281 ttgttgttaa gataactgaa atggaaattt tgcaaagaaa aactaaatgt tttgttcaca 8341 attttcacaa caataaaaga aaaggaaaca aacaaaagca aaataaaaaa tatcatgtgt 8401 aaagtttgaa attttttgaa aaaaacggaa cccccccaaa aaaagcaatt tcacctaaac 8461 acactcacac ctacacaaca gcaaaactca aacaaagaaa acatcatcat cctgaagtaa 8521 aataaaggat taataaaaaa aaaatcataa aaaaatcaaa attaaa