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LOCUS XM_013247897 8860 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X4, mRNA. ACCESSION XM_013247897 VERSION XM_013247897.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247897.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8860 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8860 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2340..7634 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_013103351.2" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 8860 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgagtcgtgt agagtagttg cgttctgttt tgaaaccatt cagtttagtt gtgctgcatg 61 cactcacact gcgctccgtt tgttcgcccg ccgctcgctc gctcgctcac tcacttgaca 121 tcaactactt ctgctcagtg tgtgctccta gtctacattt taaagaataa tattaaaaaa 181 aaaattatta aaaaaaaaat taataacgca cgtaccaact actataatgc cgcggagctt 241 aatggaagaa taaaagcaga caaacacaca catgcacaga aacaaacata acacaaacta 301 aatgattttg attttttctg ttgctctatt gttttaaaca cataattgaa tgacgtacca 361 actaacataa caaattgaac gagaaatcta aaagaattaa aactcaaagc aaaagtggaa 421 ctttaacttg gaggattcag tttgtcaaat actgaatgaa agacaagcca tagatatatg 481 agaggacaac aacaacaaca aaagcaaaat ccacaaacaa tttggggcta gaaaataaac 541 gcaaagaaaa tcaaatctta atttttaaat taagagccaa caaaaacaag aaaaacgagc 601 aaaatggtta attaaaaaat taaaagaaaa caccaacagc aaaaatttgc attgcaaaca 661 atgcaaaaat cacacaagaa caaccacaac agcaacaata ccaccacacc attctagaaa 721 aacaaacata gcacagcaac aactgaaaac gcagacaaca acaacaacaa caacataaag 781 ataaattcga ttgcaacatt gtattaagtt ttcacctaca taacaacaag aatccagaca 841 aagctagacc agctcaccca agccagagga atagaataac acttaatggt gttttaatag 901 ccaacaagtt tatctccccc cccgcctagt taattaattg atttctgaag tgaaaccaga 961 gattttgtca acaatttttc tgtctagctg aggccattgc accaacaagc agcatcctcc 1021 gtcaccacta ctgctactac atcataaaag tcgtggcttt attaattgtg ctgggaataa 1081 gtttctgttg aggacacacc agcaatgctc gtggtcaaga tacacatcca ggccataagc 1141 acataacgtt agatgttgtt gttgtttcct taaagttttc ggttgaattt tttaattttg 1201 tgttaccaca attttggttt ggatattttt ttcctagcga agaagcagca agcagtcata 1261 caaccagtca atttagcctc cagtttattc taaaaggcgg tgcaagcaga taggcttaac 1321 caaaagggga aatcccacaa cttgaaccaa ggaataaacg acgaacacag attgctaaag 1381 ggcggcttat atacacaaac agcaacagtt tgtcattata tgtatgtgag aaaaaatgtt 1441 gccgcataaa ctagaatata ttgggaaaaa tgattcgctg aacatggaaa cgttttggga 1501 agctgctttg tactccgttg ctgcctctgc cgccgccgct gctgttgttt cagctgaaag 1561 gactgtcgct gctgctgttg ttgatactgt ttgccaagca tacaaggccc acttgctgcc 1621 accaagtgtt gcaatagcta ctcacagtgt tgctgcaaac tttgctcaca ccacaacata 1681 tgacgatcaa caataaatca atcgaaagaa aacaaaaaac aaagaacgcc aaaatccaat 1741 ccaaaatcca acaacaacaa caattaagaa gaacatcatt ctgatacgca agattttaga 1801 agaaaatcct tacagcaaca acaaaaaagc gttaatcaat aataataatt aaaatatagg 1861 caaaacaaaa aaaacgagaa gtcaccttta actcaaccaa aaagccaaaa caacaaaaaa 1921 ttatatcacc tttaaaacac cccttcccct acacgagtaa aaccatcact ggttcacaag 1981 taattgtata tttttttttg ctcgcacaag taagtgagaa aatcgaaggc cgcatttctc 2041 tacatcccat taaaattatt cgggtagtaa agtatagaag cttgcagtct caagaagcag 2101 ccaacgaaga ttatctagct gtgcagtttc aaaaaagtca atcagtcagt ctgtctgtca 2161 gcccattgtg gacaaaatca tttttagacc cttcagctac agagatcata tgattttgtt 2221 gtattcacaa ggacttggac aatttgttgg cataccaaca tcaccctcac tacttggcag 2281 agaaaagcag gataatccaa tacagcaatt tcagcaaaat tcttgtcaaa agaacaggta 2341 tgaagtatcc tcaactagta tcgcctcgtg ccgtgaacgc catctctgat tggttagtat 2401 cacgtttgga gcaattaggc gtcgaatcac cccagatcta tacaagactt ctactatctc 2461 tcttacaatc gtcagttcaa gtaaacgatc caattgaatt cagcaacttg gaagcattta 2521 tcgctaatta caaaggtggg catagcaaac gttttcattt accctccgat acggagactc 2581 taaaaaaatt aaatgctgtt cagtgtttaa gggagattgt gtcgaccgaa caagagaccg 2641 ctgctattga aagactagtc gatgaactgt gtgaaaaatt aaaggatatt gagaaacgta 2701 gtcaagaact taatgatgag gaacgctttc taatcgacac caatttgaac attgaatcac 2761 taccaacgac cagtgagggc aatagccatc aattaacgca agagcaggac ccaaagcagc 2821 agcagcagtc ctcagtgatt ggttttgatc aacagcatca tttttgccaa cagcatattt 2881 tgcccgcgtc gtcttcgcag gttgccgctt cgattgccat acactctcgt cgtctagtgc 2941 caccaagtaa tgaaaatgtt ttaaacgaca gcgacaacga tcccaagaaa cgctatttcc 3001 gtgcctttcc tgcattgtcg aaggaaatgg aagattcctt ccgcatatgg cgtcgtaatg 3061 caaaatcttt aacttggcca gttgtgggac gtgcttcttc ttcaattatt ggtgacactg 3121 ttcgtgtcca caaatccata gactccagta gcggtaattt atacgccgaa agccgtagcg 3181 catgcgagaa aggcattgaa aagagattga aggcggctag tggtggaggt gttgtcgatc 3241 ctgtggaggg ttttcaaaca cataaaataa ggccagaggt tggcgcagga gatattagta 3301 gtggcagtgt ggtggcagtg gatgccattg gtggcgaagt tcaaggagca gcggcaagtg 3361 caaaaaagaa atctaaacgt cgccgtaatc aagctttgtg caagggtaag cccatccaga 3421 gtatacgcaa taaagcccca gctggtggca gcaattctaa tacgtgtggc tcagccagtg 3481 tggcaacggc tggtggcggt ggtggtaaat tctatagtca acaccaaaat tatcgcaaca 3541 ctaccccagc ttgggacact gatttcaaag ggtgctggga aatggggccg gatctgatta 3601 aggagttttt ggcccgccaa aagggagcca ctaaacgcag tcgcagcaac tccgatagct 3661 tggatcaaga gatgcgtaac gaatataaga tgcttaatga aatgcccaag gatgatgaat 3721 tgcttggcgg tatagaacga cctttgatga agcgctacat agatctaact ttttgttgtg 3781 gtgaggacga tgaacgcgct aactatgaag tgttggagga cggtgttgat tatgttgatg 3841 aggactatga tgatgagaac actttggctt ccatagaaga gctgacggcc agtggtgttg 3901 gtggcggcaa tggcaatgct cgacgtttgt atcagcgtga gggtaaattg cagaaacctc 3961 tggtgatttg caaccccata gaagagaatg acatttttga agagacctcg gactcggtgg 4021 acaatttaga ttttgccaat ttcaaggcca aattcaacag cagcgttgag gctttgtgga 4081 aagatgcaga gccgcctatg acaaacaact cgacagccaa ctctagtgct tacggtcagg 4141 ttgagagtgg tgttgccgct gctgctgctg ctgccaaagc caacacaatt ggaatttctt 4201 cggcttttta tgccaccacc tcgctaaatg ctttggctcc attcaaacag gatttgtgga 4261 acttctggtc caactacaat caacatcact acgaccagat gacgaaattc tccaacacca 4321 cttcaaccgc atcgtccatg acgatgccga caacgacaac acgtttagat gatagtagcg 4381 ctagttctgg cgctggcgcc gatattgcaa attcaagtga ttacttctca atgcccagta 4441 atttggatga tttcgacaag tctgtgggtg caatgcgtcg cgtaaatgaa gctggtgctt 4501 ccatgggtgc ccacacaccc tcgataagtg tattcttgca gaattccatt tggtcctcat 4561 cgggtgattg tgttgatgct gttggtgctg ccgctgccgc agagacggat gaaagcttcc 4621 tctacaaagt gtggcactcg aataagaaat taagtcaatt ggatgtgggg aaaaataaaa 4681 acgaaaagat ggctcacatg ggaatgactg aaggagataa tggtggaaat cgtggctata 4741 ataaggctaa agaagccgta ggtaacttgg aatcaggagg tggtgctaaa ttggaatttc 4801 ctccttacag tagtttgaag tggtcggaag gaatcaatgc cgggccagct tataataatt 4861 tgcgctctca catggcagca gcccataccg acttggagag cctaaacaaa aatgatggca 4921 aaattgttag ttttaattct gctgcgggca cagtaacagg tgccacctgg gaagccccgg 4981 cctttgggga aaactcacaa cctgacctca agtcttggtg cgcctccaat cccatgtccc 5041 tgaccgaaat gtatggcagc gatgtttgcg atagcataac tgaagaaaat gagccgctgg 5101 aaactggggc tatggaaact tcggtcacat tgcccaatca ctgctctgcc accagtggtt 5161 tcatagccta ttctcgcgtt aaacaatgcg gcctcattca accccaaagt aagcccttgc 5221 agcttcaaag tgccaatgct gctgctgctg ctgctgctca cctctccaat gactactttc 5281 gtgggggtga agaggagaac cttttgactt cggagcgcac acattttaat cccatcgaga 5341 cctatgtgga tggtcacact ttcaatatta gcagtgctct tgattcggtg gactttgaac 5401 gcagtgccag cggatttttg tgctatgatt ccaatgaata tttggaatat actcgcaacg 5461 acatctattt ggccgacgag gaggtggcca atacgaattt gatgaatttc tcggccaccg 5521 cttcgtctca gatcactgat ggccgcgtac atgttgccaa agaaaaaccg gagtgcaggg 5581 aaatgtttgt gctgaagttt cgccttaggc gatcgggaga gatagcttgt caaacggagg 5641 aaatcgactt tcaattagcc gccgccaaaa tggccaacga tcagctgcca cccattgaga 5701 gcatggtgga agtgcctatg ttttcccata cctcgttgac tctgagccga caggccaaca 5761 atgaagccat tatggcggcc gttaccaaag ccgtggctgc cgcagccaaa gcggcagctg 5821 aacagggtct gaatgcaggt catagttccc tcgcttggat acccgccact cgcaacgatt 5881 gcactcagtc ctgggtgcag gatgtctcgc tctgtgatga agtagatttt tgcagagcca 5941 cagcctctgc cgaacaattg agccaatttt ggtccatgca agaggtggaa aagcaatgcc 6001 atcaacgccg tttgccagcc agtgcttttc agcgctccga tctggagaga acggatgaca 6061 actccatgga taactcctcg cataccctgt ggggcatgtg tgctgtatgc aatagttgtg 6121 attacggcaa gtctttgcca gcgaatcgtc tgctgcgaga tgaattgcaa cgggaagccg 6181 atgaaataat gagtgatttg cgttatatgc aagatctgta tataggtgaa gccgattcgg 6241 tagcagatac ggttatggcc catgaagtgg agggcgatag gaatagtgaa attttgaaga 6301 atatagacaa tgaaagggaa catcatcatc ataagcagca gcagcagcag ccgaatgaag 6361 catcagctgc tgctgttgta gatcaagcac aggcctcaat gttgttgaag gttaaccagt 6421 tgatagagga tttacttagg cccgagggaa aaacggcaaa gctcttcaag gcaaaattcg 6481 aagaaaagcc ggagacggag acaccagaga aattgcctgt ggctgactgg gccatgaata 6541 tggacgatga tgctgtagac aattcaagtt catggcattt tggtggcagt ggcagagcag 6601 acactgccga tggccatgcc aacttaagca acatttggca acatgaaccg attgaccaga 6661 acaacactga ggccgaacga aaacttgtct gtatgaaacc catgaaacta ttgcgccaag 6721 taggaggttc cctcaacgaa gaggacttgt atgtggataa tttaaattgg gaacatgaaa 6781 atctggccaa gatatggcaa agggatacga tgcccagcgc tgacacaact tcttccccaa 6841 atgctgcaaa agcagagcat aaattggccc aaagtgagga aaacctggag gataatcgga 6901 atattgtaga gcaaaagaat ttaaaaaatc tacaaaataa tgccacacat acaccaccca 6961 cagtttcttc aagtagcaat agcaacagca atagtgccgc cgtgacatac aaaagggtgc 7021 aacattttct gaatagttcg gcggccaagt taaaattggc ggcaaatcgc aagaggcgtc 7081 attcggcttc gcaaaatttc tatcatcatc aaaaccagca gcaagtgcag tcgcagcaag 7141 agcaaaattt tcagtttggc cacagcaata gcaacaataa caacaataac aacaacagca 7201 gcagtgccag tcacaattct aatcaaatca gcagcaataa caacaacaat aatgtcaaca 7261 taaccgattt aaatcgctac aaaaagacaa acgaagagga gctagcacta tctcttgagc 7321 ccaagcaaac aattatcacc tgcaaatatt ggaccaccac tacgaatggc acccaggcct 7381 ccatggattc cgctgcggca gccatgatgc ttttggctgc cgctgcaaac aaatccaacg 7441 ttggcggcgg cagcggcgga ggcattatgg caaccaccaa caccacaacg accacctcaa 7501 acacttacga agatactaac gatgaaggca tcatgttgga ggataataca tttggtaata 7561 ccttttcttg tcttatcgat aaaaatgctt ctatactgaa acatgtaatg atgacacgac 7621 ccctaacacg ctaaacaata atacaaaaaa aaaaatgcaa atgtaaatgc aaaccatatt 7681 ctgaaactcc caaagtcccc aaaagagaaa caaaagctac aaacttaagc ggcctatgga 7741 aagagaaata gaaaaaaaga gagagagggg gcagccaaac tcagaatcca atatgatgcc 7801 ataagccaag cccttaaatt ggcatgttgt agggaggtca atttttgagc aaagaatcca 7861 aatccaaatc atgttttata ttcctactaa aactttctac tataagagcc ccctctctac 7921 aatagccgct tgttataaac tcttaaaaaa ttttaaaaaa ttcaaaaaag ccaaaaaaat 7981 aacaattgtg gagtacaatg tacttgtgaa caatgtaaaa atccccaccc cgccctcagc 8041 gccccagctc ccttcaaaat caacatagaa aaacagaaaa ttttacttca aatgttcagc 8101 tcataaatat ttttctaaaa aaaagctaca aaaaaaacaa tactttaggt ttttcataac 8161 actctcttac aagcatcccc ctccccacac aaacatgtat attgaaactt ttctaatctg 8221 ttttgttttt cttttttttt gtttaatgtt ataaattttc tctgtataaa aaaattcaca 8281 gtaaatagta actttttctt ttttgttgtt ctaaagaaga aatatttact cttttttatc 8341 tcttacaaca tacccatata catataccta ctattattat ttgatgtacc atacatatac 8401 tattattata tgcggcttat tttcttgtaa tttcgtaatt tataacagat ttataaaatt 8461 tgttttctct attttccccc tcctccaaaa accactctat tgtcccttga aaagaaaaaa 8521 aaactcaaaa aaaaaacatg ttaggttgaa aaaaattttt tttttaaata atttttgttg 8581 ttaagataac tgaaatggaa attttgcaaa gaaaaactaa atgttttgtt cacaattttc 8641 acaacaataa aagaaaagga aacaaacaaa agcaaaataa aaaatatcat gtgtaaagtt 8701 tgaaattttt tgaaaaaaac ggaacccccc caaaaaaagc aatttcacct aaacacactc 8761 acacctacac aacagcaaaa ctcaaacaaa gaaaacatca tcatcctgaa gtaaaataaa 8821 ggattaataa aaaaaaaatc ataaaaaaat caaaattaaa