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LOCUS XM_013247896 8781 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X3, mRNA. ACCESSION XM_013247896 VERSION XM_013247896.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247896.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8781 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8781 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2261..7555 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_013103350.2" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 8781 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctcacactgc gctccgtttg ttcgcccgcc gctcgctcgc tcgctcactc acttgacatc 61 aactacttct gctcacttat cacaaaaaat atgtaaatca ttttgacttg aggaaaagtg 121 ccaacacaag aagtcaactt ttctgaaacg actttaaacg aatgaattaa agaaaaaaaa 181 ttaaacgaaa aaatacgaca tttacacgag ataaataatt ttaaggcgta cctacagtaa 241 aaaaaatatt aacctaacca accacacaca aactaaaaga aatcaacagt tatttgcttc 301 aaataaatct aaaagaatta aaactcaaag caaaagtgga actttaactt ggaggattca 361 gtttgtcaaa tactgaatga aagacaagcc atagatatat gagaggacaa caacaacaac 421 aaaagcaaaa tccacaaaca atttggggct agaaaataaa cgcaaagaaa atcaaatctt 481 aatttttaaa ttaagagcca acaaaaacaa gaaaaacgag caaaatggtt aattaaaaaa 541 ttaaaagaaa acaccaacag caaaaatttg cattgcaaac aatgcaaaaa tcacacaaga 601 acaaccacaa cagcaacaat accaccacac cattctagaa aaacaaacat agcacagcaa 661 caactgaaaa cgcagacaac aacaacaaca acaacataaa gataaattcg attgcaacat 721 tgtattaagt tttcacctac ataacaacaa gaatccagac aaagctagac cagctcaccc 781 aagccagagg aatagaataa cacttaatgg tgttttaata gccaacaagt ttatctcccc 841 ccccgcctag ttaattaatt gatttctgaa gtgaaaccag agattttgtc aacaattttt 901 ctgtctagct gaggccattg caccaacaag cagcatcctc cgtcaccact actgctacta 961 catcataaaa gtcgtggctt tattaattgt gctgggaata agtttctgtt gaggacacac 1021 cagcaatgct cgtggtcaag atacacatcc aggccataag cacataacgt tagatgttgt 1081 tgttgtttcc ttaaagtttt cggttgaatt ttttaatttt gtgttaccac aattttggtt 1141 tggatatttt tttcctagcg aagaagcagc aagcagtcat acaaccagtc aatttagcct 1201 ccagtttatt ctaaaaggcg gtgcaagcag ataggcttaa ccaaaagggg aaatcccaca 1261 acttgaacca aggaataaac gacgaacaca gattgctaaa gggcggctta tatacacaaa 1321 cagcaacagt ttgtcattat atgtatgtga gaaaaaatgt tgccgcataa actagaatat 1381 attgggaaaa atgattcgct gaacatggaa acgttttggg aagctgcttt gtactccgtt 1441 gctgcctctg ccgccgccgc tgctgttgtt tcagctgaaa ggactgtcgc tgctgctgtt 1501 gttgatactg tttgccaagc atacaaggcc cacttgctgc caccaagtgt tgcaatagct 1561 actcacagtg ttgctgcaaa ctttgctcac accacaacat atgacgatca acaataaatc 1621 aatcgaaaga aaacaaaaaa caaagaacgc caaaatccaa tccaaaatcc aacaacaaca 1681 acaattaaga agaacatcat tctgatacgc aagattttag aagaaaatcc ttacagcaac 1741 aacaaaaaag cgttaatcaa taataataat taaaatatag gcaaaacaaa aaaaacgaga 1801 agtcaccttt aactcaacca aaaagccaaa acaacaaaaa attatatcac ctttaaaaca 1861 ccccttcccc tacacgagta aaaccatcac tggttcacaa gtaattgtat attttttttt 1921 gctcgcacaa gtaagtgaga aaatcgaagg ccgcatttct ctacatccca ttaaaattat 1981 tcgggtagta aagtatagaa gcttgcagtc tcaagaagca gccaacgaag attatctagc 2041 tgtgcagttt caaaaaagtc aatcagtcag tctgtctgtc agcccattgt ggacaaaatc 2101 atttttagac ccttcagcta cagagatcat atgattttgt tgtattcaca aggacttgga 2161 caatttgttg gcataccaac atcaccctca ctacttggca gagaaaagca ggataatcca 2221 atacagcaat ttcagcaaaa ttcttgtcaa aagaacaggt atgaagtatc ctcaactagt 2281 atcgcctcgt gccgtgaacg ccatctctga ttggttagta tcacgtttgg agcaattagg 2341 cgtcgaatca ccccagatct atacaagact tctactatct ctcttacaat cgtcagttca 2401 agtaaacgat ccaattgaat tcagcaactt ggaagcattt atcgctaatt acaaaggtgg 2461 gcatagcaaa cgttttcatt taccctccga tacggagact ctaaaaaaat taaatgctgt 2521 tcagtgttta agggagattg tgtcgaccga acaagagacc gctgctattg aaagactagt 2581 cgatgaactg tgtgaaaaat taaaggatat tgagaaacgt agtcaagaac ttaatgatga 2641 ggaacgcttt ctaatcgaca ccaatttgaa cattgaatca ctaccaacga ccagtgaggg 2701 caatagccat caattaacgc aagagcagga cccaaagcag cagcagcagt cctcagtgat 2761 tggttttgat caacagcatc atttttgcca acagcatatt ttgcccgcgt cgtcttcgca 2821 ggttgccgct tcgattgcca tacactctcg tcgtctagtg ccaccaagta atgaaaatgt 2881 tttaaacgac agcgacaacg atcccaagaa acgctatttc cgtgcctttc ctgcattgtc 2941 gaaggaaatg gaagattcct tccgcatatg gcgtcgtaat gcaaaatctt taacttggcc 3001 agttgtggga cgtgcttctt cttcaattat tggtgacact gttcgtgtcc acaaatccat 3061 agactccagt agcggtaatt tatacgccga aagccgtagc gcatgcgaga aaggcattga 3121 aaagagattg aaggcggcta gtggtggagg tgttgtcgat cctgtggagg gttttcaaac 3181 acataaaata aggccagagg ttggcgcagg agatattagt agtggcagtg tggtggcagt 3241 ggatgccatt ggtggcgaag ttcaaggagc agcggcaagt gcaaaaaaga aatctaaacg 3301 tcgccgtaat caagctttgt gcaagggtaa gcccatccag agtatacgca ataaagcccc 3361 agctggtggc agcaattcta atacgtgtgg ctcagccagt gtggcaacgg ctggtggcgg 3421 tggtggtaaa ttctatagtc aacaccaaaa ttatcgcaac actaccccag cttgggacac 3481 tgatttcaaa gggtgctggg aaatggggcc ggatctgatt aaggagtttt tggcccgcca 3541 aaagggagcc actaaacgca gtcgcagcaa ctccgatagc ttggatcaag agatgcgtaa 3601 cgaatataag atgcttaatg aaatgcccaa ggatgatgaa ttgcttggcg gtatagaacg 3661 acctttgatg aagcgctaca tagatctaac tttttgttgt ggtgaggacg atgaacgcgc 3721 taactatgaa gtgttggagg acggtgttga ttatgttgat gaggactatg atgatgagaa 3781 cactttggct tccatagaag agctgacggc cagtggtgtt ggtggcggca atggcaatgc 3841 tcgacgtttg tatcagcgtg agggtaaatt gcagaaacct ctggtgattt gcaaccccat 3901 agaagagaat gacatttttg aagagacctc ggactcggtg gacaatttag attttgccaa 3961 tttcaaggcc aaattcaaca gcagcgttga ggctttgtgg aaagatgcag agccgcctat 4021 gacaaacaac tcgacagcca actctagtgc ttacggtcag gttgagagtg gtgttgccgc 4081 tgctgctgct gctgccaaag ccaacacaat tggaatttct tcggcttttt atgccaccac 4141 ctcgctaaat gctttggctc cattcaaaca ggatttgtgg aacttctggt ccaactacaa 4201 tcaacatcac tacgaccaga tgacgaaatt ctccaacacc acttcaaccg catcgtccat 4261 gacgatgccg acaacgacaa cacgtttaga tgatagtagc gctagttctg gcgctggcgc 4321 cgatattgca aattcaagtg attacttctc aatgcccagt aatttggatg atttcgacaa 4381 gtctgtgggt gcaatgcgtc gcgtaaatga agctggtgct tccatgggtg cccacacacc 4441 ctcgataagt gtattcttgc agaattccat ttggtcctca tcgggtgatt gtgttgatgc 4501 tgttggtgct gccgctgccg cagagacgga tgaaagcttc ctctacaaag tgtggcactc 4561 gaataagaaa ttaagtcaat tggatgtggg gaaaaataaa aacgaaaaga tggctcacat 4621 gggaatgact gaaggagata atggtggaaa tcgtggctat aataaggcta aagaagccgt 4681 aggtaacttg gaatcaggag gtggtgctaa attggaattt cctccttaca gtagtttgaa 4741 gtggtcggaa ggaatcaatg ccgggccagc ttataataat ttgcgctctc acatggcagc 4801 agcccatacc gacttggaga gcctaaacaa aaatgatggc aaaattgtta gttttaattc 4861 tgctgcgggc acagtaacag gtgccacctg ggaagccccg gcctttgggg aaaactcaca 4921 acctgacctc aagtcttggt gcgcctccaa tcccatgtcc ctgaccgaaa tgtatggcag 4981 cgatgtttgc gatagcataa ctgaagaaaa tgagccgctg gaaactgggg ctatggaaac 5041 ttcggtcaca ttgcccaatc actgctctgc caccagtggt ttcatagcct attctcgcgt 5101 taaacaatgc ggcctcattc aaccccaaag taagcccttg cagcttcaaa gtgccaatgc 5161 tgctgctgct gctgctgctc acctctccaa tgactacttt cgtgggggtg aagaggagaa 5221 ccttttgact tcggagcgca cacattttaa tcccatcgag acctatgtgg atggtcacac 5281 tttcaatatt agcagtgctc ttgattcggt ggactttgaa cgcagtgcca gcggattttt 5341 gtgctatgat tccaatgaat atttggaata tactcgcaac gacatctatt tggccgacga 5401 ggaggtggcc aatacgaatt tgatgaattt ctcggccacc gcttcgtctc agatcactga 5461 tggccgcgta catgttgcca aagaaaaacc ggagtgcagg gaaatgtttg tgctgaagtt 5521 tcgccttagg cgatcgggag agatagcttg tcaaacggag gaaatcgact ttcaattagc 5581 cgccgccaaa atggccaacg atcagctgcc acccattgag agcatggtgg aagtgcctat 5641 gttttcccat acctcgttga ctctgagccg acaggccaac aatgaagcca ttatggcggc 5701 cgttaccaaa gccgtggctg ccgcagccaa agcggcagct gaacagggtc tgaatgcagg 5761 tcatagttcc ctcgcttgga tacccgccac tcgcaacgat tgcactcagt cctgggtgca 5821 ggatgtctcg ctctgtgatg aagtagattt ttgcagagcc acagcctctg ccgaacaatt 5881 gagccaattt tggtccatgc aagaggtgga aaagcaatgc catcaacgcc gtttgccagc 5941 cagtgctttt cagcgctccg atctggagag aacggatgac aactccatgg ataactcctc 6001 gcataccctg tggggcatgt gtgctgtatg caatagttgt gattacggca agtctttgcc 6061 agcgaatcgt ctgctgcgag atgaattgca acgggaagcc gatgaaataa tgagtgattt 6121 gcgttatatg caagatctgt atataggtga agccgattcg gtagcagata cggttatggc 6181 ccatgaagtg gagggcgata ggaatagtga aattttgaag aatatagaca atgaaaggga 6241 acatcatcat cataagcagc agcagcagca gccgaatgaa gcatcagctg ctgctgttgt 6301 agatcaagca caggcctcaa tgttgttgaa ggttaaccag ttgatagagg atttacttag 6361 gcccgaggga aaaacggcaa agctcttcaa ggcaaaattc gaagaaaagc cggagacgga 6421 gacaccagag aaattgcctg tggctgactg ggccatgaat atggacgatg atgctgtaga 6481 caattcaagt tcatggcatt ttggtggcag tggcagagca gacactgccg atggccatgc 6541 caacttaagc aacatttggc aacatgaacc gattgaccag aacaacactg aggccgaacg 6601 aaaacttgtc tgtatgaaac ccatgaaact attgcgccaa gtaggaggtt ccctcaacga 6661 agaggacttg tatgtggata atttaaattg ggaacatgaa aatctggcca agatatggca 6721 aagggatacg atgcccagcg ctgacacaac ttcttcccca aatgctgcaa aagcagagca 6781 taaattggcc caaagtgagg aaaacctgga ggataatcgg aatattgtag agcaaaagaa 6841 tttaaaaaat ctacaaaata atgccacaca tacaccaccc acagtttctt caagtagcaa 6901 tagcaacagc aatagtgccg ccgtgacata caaaagggtg caacattttc tgaatagttc 6961 ggcggccaag ttaaaattgg cggcaaatcg caagaggcgt cattcggctt cgcaaaattt 7021 ctatcatcat caaaaccagc agcaagtgca gtcgcagcaa gagcaaaatt ttcagtttgg 7081 ccacagcaat agcaacaata acaacaataa caacaacagc agcagtgcca gtcacaattc 7141 taatcaaatc agcagcaata acaacaacaa taatgtcaac ataaccgatt taaatcgcta 7201 caaaaagaca aacgaagagg agctagcact atctcttgag cccaagcaaa caattatcac 7261 ctgcaaatat tggaccacca ctacgaatgg cacccaggcc tccatggatt ccgctgcggc 7321 agccatgatg cttttggctg ccgctgcaaa caaatccaac gttggcggcg gcagcggcgg 7381 aggcattatg gcaaccacca acaccacaac gaccacctca aacacttacg aagatactaa 7441 cgatgaaggc atcatgttgg aggataatac atttggtaat accttttctt gtcttatcga 7501 taaaaatgct tctatactga aacatgtaat gatgacacga cccctaacac gctaaacaat 7561 aatacaaaaa aaaaaatgca aatgtaaatg caaaccatat tctgaaactc ccaaagtccc 7621 caaaagagaa acaaaagcta caaacttaag cggcctatgg aaagagaaat agaaaaaaag 7681 agagagaggg ggcagccaaa ctcagaatcc aatatgatgc cataagccaa gcccttaaat 7741 tggcatgttg tagggaggtc aatttttgag caaagaatcc aaatccaaat catgttttat 7801 attcctacta aaactttcta ctataagagc cccctctcta caatagccgc ttgttataaa 7861 ctcttaaaaa attttaaaaa attcaaaaaa gccaaaaaaa taacaattgt ggagtacaat 7921 gtacttgtga acaatgtaaa aatccccacc ccgccctcag cgccccagct cccttcaaaa 7981 tcaacataga aaaacagaaa attttacttc aaatgttcag ctcataaata tttttctaaa 8041 aaaaagctac aaaaaaaaca atactttagg tttttcataa cactctctta caagcatccc 8101 cctccccaca caaacatgta tattgaaact tttctaatct gttttgtttt tctttttttt 8161 tgtttaatgt tataaatttt ctctgtataa aaaaattcac agtaaatagt aactttttct 8221 tttttgttgt tctaaagaag aaatatttac tcttttttat ctcttacaac atacccatat 8281 acatatacct actattatta tttgatgtac catacatata ctattattat atgcggctta 8341 ttttcttgta atttcgtaat ttataacaga tttataaaat ttgttttctc tattttcccc 8401 ctcctccaaa aaccactcta ttgtcccttg aaaagaaaaa aaaactcaaa aaaaaaacat 8461 gttaggttga aaaaaatttt ttttttaaat aatttttgtt gttaagataa ctgaaatgga 8521 aattttgcaa agaaaaacta aatgttttgt tcacaatttt cacaacaata aaagaaaagg 8581 aaacaaacaa aagcaaaata aaaaatatca tgtgtaaagt ttgaaatttt ttgaaaaaaa 8641 cggaaccccc ccaaaaaaag caatttcacc taaacacact cacacctaca caacagcaaa 8701 actcaaacaa agaaaacatc atcatcctga agtaaaataa aggattaata aaaaaaaaat 8761 cataaaaaaa tcaaaattaa a