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LOCUS XM_013247895 8570 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X8, mRNA. ACCESSION XM_013247895 VERSION XM_013247895.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247895.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8570 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8570 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2050..7344 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_013103349.2" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 8570 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaacagacc atcagctgtt ttcgagtgca tttgcttgat aatgcagttc gttatagcct 61 tagtgctgtc taaatgttat tcgttgttat cgtaaatcta aaagaattaa aactcaaagc 121 aaaagtggaa ctttaacttg gaggattcag tttgtcaaat actgaatgaa agacaagcca 181 tagatatatg agaggacaac aacaacaaca aaagcaaaat ccacaaacaa tttggggcta 241 gaaaataaac gcaaagaaaa tcaaatctta atttttaaat taagagccaa caaaaacaag 301 aaaaacgagc aaaatggtta attaaaaaat taaaagaaaa caccaacagc aaaaatttgc 361 attgcaaaca atgcaaaaat cacacaagaa caaccacaac agcaacaata ccaccacacc 421 attctagaaa aacaaacata gcacagcaac aactgaaaac gcagacaaca acaacaacaa 481 caacataaag ataaattcga ttgcaacatt gtattaagtt ttcacctaca taacaacaag 541 aatccagaca aagctagacc agctcaccca agccagagga atagaataac acttaatggt 601 gttttaatag ccaacaagtt tatctccccc cccgcctagt taattaattg atttctgaag 661 tgaaaccaga gattttgtca acaatttttc tgtctagctg aggccattgc accaacaagc 721 agcatcctcc gtcaccacta ctgctactac atcataaaag tcgtggcttt attaattgtg 781 ctgggaataa gtttctgttg aggacacacc agcaatgctc gtggtcaaga tacacatcca 841 ggccataagc acataacgtt agatgttgtt gttgtttcct taaagttttc ggttgaattt 901 tttaattttg tgttaccaca attttggttt ggatattttt ttcctagcga agaagcagca 961 agcagtcata caaccagtca atttagcctc cagtttattc taaaaggcgg tgcaagcaga 1021 taggcttaac caaaagggga aatcccacaa cttgaaccaa ggaataaacg acgaacacag 1081 attgctaaag ggcggcttat atacacaaac agcaacagtt tgtcattata tgtatgtgag 1141 aaaaaatgtt gccgcataaa ctagaatata ttgggaaaaa tgattcgctg aacatggaaa 1201 cgttttggga agctgctttg tactccgttg ctgcctctgc cgccgccgct gctgttgttt 1261 cagctgaaag gactgtcgct gctgctgttg ttgatactgt ttgccaagca tacaaggccc 1321 acttgctgcc accaagtgtt gcaatagcta ctcacagtgt tgctgcaaac tttgctcaca 1381 ccacaacata tgacgatcaa caataaatca atcgaaagaa aacaaaaaac aaagaacgcc 1441 aaaatccaat ccaaaatcca acaacaacaa caattaagaa gaacatcatt ctgatacgca 1501 agattttaga agaaaatcct tacagcaaca acaaaaaagc gttaatcaat aataataatt 1561 aaaatatagg caaaacaaaa aaaacgagaa gtcaccttta actcaaccaa aaagccaaaa 1621 caacaaaaaa ttatatcacc tttaaaacac cccttcccct acacgagtaa aaccatcact 1681 ggttcacaag taattgtata tttttttttg ctcgcacaag taagtgagaa aatcgaaggc 1741 cgcatttctc tacatcccat taaaattatt cgggtagtaa agtatagaag cttgcagtct 1801 caagaagcag ccaacgaaga ttatctagct gtgcagtttc aaaaaagtca atcagtcagt 1861 ctgtctgtca gcccattgtg gacaaaatca tttttagacc cttcagctac agagatcata 1921 tgattttgtt gtattcacaa ggacttggac aatttgttgg cataccaaca tcaccctcac 1981 tacttggcag agaaaagcag gataatccaa tacagcaatt tcagcaaaat tcttgtcaaa 2041 agaacaggta tgaagtatcc tcaactagta tcgcctcgtg ccgtgaacgc catctctgat 2101 tggttagtat cacgtttgga gcaattaggc gtcgaatcac cccagatcta tacaagactt 2161 ctactatctc tcttacaatc gtcagttcaa gtaaacgatc caattgaatt cagcaacttg 2221 gaagcattta tcgctaatta caaaggtggg catagcaaac gttttcattt accctccgat 2281 acggagactc taaaaaaatt aaatgctgtt cagtgtttaa gggagattgt gtcgaccgaa 2341 caagagaccg ctgctattga aagactagtc gatgaactgt gtgaaaaatt aaaggatatt 2401 gagaaacgta gtcaagaact taatgatgag gaacgctttc taatcgacac caatttgaac 2461 attgaatcac taccaacgac cagtgagggc aatagccatc aattaacgca agagcaggac 2521 ccaaagcagc agcagcagtc ctcagtgatt ggttttgatc aacagcatca tttttgccaa 2581 cagcatattt tgcccgcgtc gtcttcgcag gttgccgctt cgattgccat acactctcgt 2641 cgtctagtgc caccaagtaa tgaaaatgtt ttaaacgaca gcgacaacga tcccaagaaa 2701 cgctatttcc gtgcctttcc tgcattgtcg aaggaaatgg aagattcctt ccgcatatgg 2761 cgtcgtaatg caaaatcttt aacttggcca gttgtgggac gtgcttcttc ttcaattatt 2821 ggtgacactg ttcgtgtcca caaatccata gactccagta gcggtaattt atacgccgaa 2881 agccgtagcg catgcgagaa aggcattgaa aagagattga aggcggctag tggtggaggt 2941 gttgtcgatc ctgtggaggg ttttcaaaca cataaaataa ggccagaggt tggcgcagga 3001 gatattagta gtggcagtgt ggtggcagtg gatgccattg gtggcgaagt tcaaggagca 3061 gcggcaagtg caaaaaagaa atctaaacgt cgccgtaatc aagctttgtg caagggtaag 3121 cccatccaga gtatacgcaa taaagcccca gctggtggca gcaattctaa tacgtgtggc 3181 tcagccagtg tggcaacggc tggtggcggt ggtggtaaat tctatagtca acaccaaaat 3241 tatcgcaaca ctaccccagc ttgggacact gatttcaaag ggtgctggga aatggggccg 3301 gatctgatta aggagttttt ggcccgccaa aagggagcca ctaaacgcag tcgcagcaac 3361 tccgatagct tggatcaaga gatgcgtaac gaatataaga tgcttaatga aatgcccaag 3421 gatgatgaat tgcttggcgg tatagaacga cctttgatga agcgctacat agatctaact 3481 ttttgttgtg gtgaggacga tgaacgcgct aactatgaag tgttggagga cggtgttgat 3541 tatgttgatg aggactatga tgatgagaac actttggctt ccatagaaga gctgacggcc 3601 agtggtgttg gtggcggcaa tggcaatgct cgacgtttgt atcagcgtga gggtaaattg 3661 cagaaacctc tggtgatttg caaccccata gaagagaatg acatttttga agagacctcg 3721 gactcggtgg acaatttaga ttttgccaat ttcaaggcca aattcaacag cagcgttgag 3781 gctttgtgga aagatgcaga gccgcctatg acaaacaact cgacagccaa ctctagtgct 3841 tacggtcagg ttgagagtgg tgttgccgct gctgctgctg ctgccaaagc caacacaatt 3901 ggaatttctt cggcttttta tgccaccacc tcgctaaatg ctttggctcc attcaaacag 3961 gatttgtgga acttctggtc caactacaat caacatcact acgaccagat gacgaaattc 4021 tccaacacca cttcaaccgc atcgtccatg acgatgccga caacgacaac acgtttagat 4081 gatagtagcg ctagttctgg cgctggcgcc gatattgcaa attcaagtga ttacttctca 4141 atgcccagta atttggatga tttcgacaag tctgtgggtg caatgcgtcg cgtaaatgaa 4201 gctggtgctt ccatgggtgc ccacacaccc tcgataagtg tattcttgca gaattccatt 4261 tggtcctcat cgggtgattg tgttgatgct gttggtgctg ccgctgccgc agagacggat 4321 gaaagcttcc tctacaaagt gtggcactcg aataagaaat taagtcaatt ggatgtgggg 4381 aaaaataaaa acgaaaagat ggctcacatg ggaatgactg aaggagataa tggtggaaat 4441 cgtggctata ataaggctaa agaagccgta ggtaacttgg aatcaggagg tggtgctaaa 4501 ttggaatttc ctccttacag tagtttgaag tggtcggaag gaatcaatgc cgggccagct 4561 tataataatt tgcgctctca catggcagca gcccataccg acttggagag cctaaacaaa 4621 aatgatggca aaattgttag ttttaattct gctgcgggca cagtaacagg tgccacctgg 4681 gaagccccgg cctttgggga aaactcacaa cctgacctca agtcttggtg cgcctccaat 4741 cccatgtccc tgaccgaaat gtatggcagc gatgtttgcg atagcataac tgaagaaaat 4801 gagccgctgg aaactggggc tatggaaact tcggtcacat tgcccaatca ctgctctgcc 4861 accagtggtt tcatagccta ttctcgcgtt aaacaatgcg gcctcattca accccaaagt 4921 aagcccttgc agcttcaaag tgccaatgct gctgctgctg ctgctgctca cctctccaat 4981 gactactttc gtgggggtga agaggagaac cttttgactt cggagcgcac acattttaat 5041 cccatcgaga cctatgtgga tggtcacact ttcaatatta gcagtgctct tgattcggtg 5101 gactttgaac gcagtgccag cggatttttg tgctatgatt ccaatgaata tttggaatat 5161 actcgcaacg acatctattt ggccgacgag gaggtggcca atacgaattt gatgaatttc 5221 tcggccaccg cttcgtctca gatcactgat ggccgcgtac atgttgccaa agaaaaaccg 5281 gagtgcaggg aaatgtttgt gctgaagttt cgccttaggc gatcgggaga gatagcttgt 5341 caaacggagg aaatcgactt tcaattagcc gccgccaaaa tggccaacga tcagctgcca 5401 cccattgaga gcatggtgga agtgcctatg ttttcccata cctcgttgac tctgagccga 5461 caggccaaca atgaagccat tatggcggcc gttaccaaag ccgtggctgc cgcagccaaa 5521 gcggcagctg aacagggtct gaatgcaggt catagttccc tcgcttggat acccgccact 5581 cgcaacgatt gcactcagtc ctgggtgcag gatgtctcgc tctgtgatga agtagatttt 5641 tgcagagcca cagcctctgc cgaacaattg agccaatttt ggtccatgca agaggtggaa 5701 aagcaatgcc atcaacgccg tttgccagcc agtgcttttc agcgctccga tctggagaga 5761 acggatgaca actccatgga taactcctcg cataccctgt ggggcatgtg tgctgtatgc 5821 aatagttgtg attacggcaa gtctttgcca gcgaatcgtc tgctgcgaga tgaattgcaa 5881 cgggaagccg atgaaataat gagtgatttg cgttatatgc aagatctgta tataggtgaa 5941 gccgattcgg tagcagatac ggttatggcc catgaagtgg agggcgatag gaatagtgaa 6001 attttgaaga atatagacaa tgaaagggaa catcatcatc ataagcagca gcagcagcag 6061 ccgaatgaag catcagctgc tgctgttgta gatcaagcac aggcctcaat gttgttgaag 6121 gttaaccagt tgatagagga tttacttagg cccgagggaa aaacggcaaa gctcttcaag 6181 gcaaaattcg aagaaaagcc ggagacggag acaccagaga aattgcctgt ggctgactgg 6241 gccatgaata tggacgatga tgctgtagac aattcaagtt catggcattt tggtggcagt 6301 ggcagagcag acactgccga tggccatgcc aacttaagca acatttggca acatgaaccg 6361 attgaccaga acaacactga ggccgaacga aaacttgtct gtatgaaacc catgaaacta 6421 ttgcgccaag taggaggttc cctcaacgaa gaggacttgt atgtggataa tttaaattgg 6481 gaacatgaaa atctggccaa gatatggcaa agggatacga tgcccagcgc tgacacaact 6541 tcttccccaa atgctgcaaa agcagagcat aaattggccc aaagtgagga aaacctggag 6601 gataatcgga atattgtaga gcaaaagaat ttaaaaaatc tacaaaataa tgccacacat 6661 acaccaccca cagtttcttc aagtagcaat agcaacagca atagtgccgc cgtgacatac 6721 aaaagggtgc aacattttct gaatagttcg gcggccaagt taaaattggc ggcaaatcgc 6781 aagaggcgtc attcggcttc gcaaaatttc tatcatcatc aaaaccagca gcaagtgcag 6841 tcgcagcaag agcaaaattt tcagtttggc cacagcaata gcaacaataa caacaataac 6901 aacaacagca gcagtgccag tcacaattct aatcaaatca gcagcaataa caacaacaat 6961 aatgtcaaca taaccgattt aaatcgctac aaaaagacaa acgaagagga gctagcacta 7021 tctcttgagc ccaagcaaac aattatcacc tgcaaatatt ggaccaccac tacgaatggc 7081 acccaggcct ccatggattc cgctgcggca gccatgatgc ttttggctgc cgctgcaaac 7141 aaatccaacg ttggcggcgg cagcggcgga ggcattatgg caaccaccaa caccacaacg 7201 accacctcaa acacttacga agatactaac gatgaaggca tcatgttgga ggataataca 7261 tttggtaata ccttttcttg tcttatcgat aaaaatgctt ctatactgaa acatgtaatg 7321 atgacacgac ccctaacacg ctaaacaata atacaaaaaa aaaaatgcaa atgtaaatgc 7381 aaaccatatt ctgaaactcc caaagtcccc aaaagagaaa caaaagctac aaacttaagc 7441 ggcctatgga aagagaaata gaaaaaaaga gagagagggg gcagccaaac tcagaatcca 7501 atatgatgcc ataagccaag cccttaaatt ggcatgttgt agggaggtca atttttgagc 7561 aaagaatcca aatccaaatc atgttttata ttcctactaa aactttctac tataagagcc 7621 ccctctctac aatagccgct tgttataaac tcttaaaaaa ttttaaaaaa ttcaaaaaag 7681 ccaaaaaaat aacaattgtg gagtacaatg tacttgtgaa caatgtaaaa atccccaccc 7741 cgccctcagc gccccagctc ccttcaaaat caacatagaa aaacagaaaa ttttacttca 7801 aatgttcagc tcataaatat ttttctaaaa aaaagctaca aaaaaaacaa tactttaggt 7861 ttttcataac actctcttac aagcatcccc ctccccacac aaacatgtat attgaaactt 7921 ttctaatctg ttttgttttt cttttttttt gtttaatgtt ataaattttc tctgtataaa 7981 aaaattcaca gtaaatagta actttttctt ttttgttgtt ctaaagaaga aatatttact 8041 cttttttatc tcttacaaca tacccatata catataccta ctattattat ttgatgtacc 8101 atacatatac tattattata tgcggcttat tttcttgtaa tttcgtaatt tataacagat 8161 ttataaaatt tgttttctct attttccccc tcctccaaaa accactctat tgtcccttga 8221 aaagaaaaaa aaactcaaaa aaaaaacatg ttaggttgaa aaaaattttt tttttaaata 8281 atttttgttg ttaagataac tgaaatggaa attttgcaaa gaaaaactaa atgttttgtt 8341 cacaattttc acaacaataa aagaaaagga aacaaacaaa agcaaaataa aaaatatcat 8401 gtgtaaagtt tgaaattttt tgaaaaaaac ggaacccccc caaaaaaagc aatttcacct 8461 aaacacactc acacctacac aacagcaaaa ctcaaacaaa gaaaacatca tcatcctgaa 8521 gtaaaataaa ggattaataa aaaaaaaatc ataaaaaaat caaaattaaa