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LOCUS XM_013247893 9409 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X1, mRNA. ACCESSION XM_013247893 VERSION XM_013247893.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247893.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9409 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9409 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2889..8183 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_013103347.2" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 9409 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgagtcgtgt agagtagttg cgttctgttt tgaaaccatt cagtttagtt gtgctgcatg 61 cactcacact gcgctccgtt tgttcgcccg ccgctcgctc gctcgctcac tcacttgaca 121 tcaactactt ctgctcagtg tgtgctccta gtctacattt taaagaataa tattaaaaaa 181 aaaattatta aaaaaaaaat taataacgca cgtaccaact actataatgc cgcggagctt 241 aatggaagaa taaaagcaga caaacacaca catgcacaga aacaaacata acacaaacta 301 aatgattttg attttttctg ttgctctatt gttttaaaca cataattgaa tgacgtacca 361 actaacataa caaattgaac gaggtttgaa aagtgttttt ttttcttatt tgtttgccac 421 ttgtacgaaa tttcacagta tttttcttga ctaaagagaa agtaaaaaaa aattgtaaaa 481 caaaaataaa tacctaccta taaaaaaatt gagtaaatat agaaaaaaat catttcgatt 541 cgttatcaat cagtaacagt gaccgtgaaa gtgcgatata tcgtcgtggt cgtcgatggt 601 tttatgattg taaagtgtgt tttgtattag aagaatatga cgacaatatt ttgaatattg 661 attttatatt tttgtgtgtt tcttcccccc ggaacaaata aagcttatca caaaaaatat 721 gtaaatcatt ttgacttgag gaaaagtgcc aacacaagaa gtcaactttt ctgaaacgac 781 tttaaacgaa tgaattaaag aaaaaaaatt aaacgaaaaa atacgacatt tacacgagat 841 aaataatttt aaggcgtacc tacagtaaaa aaaatattaa cctaaccaac cacacacaaa 901 ctaaaagaaa tcaacagtta tttgcttcaa ataaatctaa aagaattaaa actcaaagca 961 aaagtggaac tttaacttgg aggattcagt ttgtcaaata ctgaatgaaa gacaagccat 1021 agatatatga gaggacaaca acaacaacaa aagcaaaatc cacaaacaat ttggggctag 1081 aaaataaacg caaagaaaat caaatcttaa tttttaaatt aagagccaac aaaaacaaga 1141 aaaacgagca aaatggttaa ttaaaaaatt aaaagaaaac accaacagca aaaatttgca 1201 ttgcaaacaa tgcaaaaatc acacaagaac aaccacaaca gcaacaatac caccacacca 1261 ttctagaaaa acaaacatag cacagcaaca actgaaaacg cagacaacaa caacaacaac 1321 aacataaaga taaattcgat tgcaacattg tattaagttt tcacctacat aacaacaaga 1381 atccagacaa agctagacca gctcacccaa gccagaggaa tagaataaca cttaatggtg 1441 ttttaatagc caacaagttt atctcccccc ccgcctagtt aattaattga tttctgaagt 1501 gaaaccagag attttgtcaa caatttttct gtctagctga ggccattgca ccaacaagca 1561 gcatcctccg tcaccactac tgctactaca tcataaaagt cgtggcttta ttaattgtgc 1621 tgggaataag tttctgttga ggacacacca gcaatgctcg tggtcaagat acacatccag 1681 gccataagca cataacgtta gatgttgttg ttgtttcctt aaagttttcg gttgaatttt 1741 ttaattttgt gttaccacaa ttttggtttg gatatttttt tcctagcgaa gaagcagcaa 1801 gcagtcatac aaccagtcaa tttagcctcc agtttattct aaaaggcggt gcaagcagat 1861 aggcttaacc aaaaggggaa atcccacaac ttgaaccaag gaataaacga cgaacacaga 1921 ttgctaaagg gcggcttata tacacaaaca gcaacagttt gtcattatat gtatgtgaga 1981 aaaaatgttg ccgcataaac tagaatatat tgggaaaaat gattcgctga acatggaaac 2041 gttttgggaa gctgctttgt actccgttgc tgcctctgcc gccgccgctg ctgttgtttc 2101 agctgaaagg actgtcgctg ctgctgttgt tgatactgtt tgccaagcat acaaggccca 2161 cttgctgcca ccaagtgttg caatagctac tcacagtgtt gctgcaaact ttgctcacac 2221 cacaacatat gacgatcaac aataaatcaa tcgaaagaaa acaaaaaaca aagaacgcca 2281 aaatccaatc caaaatccaa caacaacaac aattaagaag aacatcattc tgatacgcaa 2341 gattttagaa gaaaatcctt acagcaacaa caaaaaagcg ttaatcaata ataataatta 2401 aaatataggc aaaacaaaaa aaacgagaag tcacctttaa ctcaaccaaa aagccaaaac 2461 aacaaaaaat tatatcacct ttaaaacacc ccttccccta cacgagtaaa accatcactg 2521 gttcacaagt aattgtatat ttttttttgc tcgcacaagt aagtgagaaa atcgaaggcc 2581 gcatttctct acatcccatt aaaattattc gggtagtaaa gtatagaagc ttgcagtctc 2641 aagaagcagc caacgaagat tatctagctg tgcagtttca aaaaagtcaa tcagtcagtc 2701 tgtctgtcag cccattgtgg acaaaatcat ttttagaccc ttcagctaca gagatcatat 2761 gattttgttg tattcacaag gacttggaca atttgttggc ataccaacat caccctcact 2821 acttggcaga gaaaagcagg ataatccaat acagcaattt cagcaaaatt cttgtcaaaa 2881 gaacaggtat gaagtatcct caactagtat cgcctcgtgc cgtgaacgcc atctctgatt 2941 ggttagtatc acgtttggag caattaggcg tcgaatcacc ccagatctat acaagacttc 3001 tactatctct cttacaatcg tcagttcaag taaacgatcc aattgaattc agcaacttgg 3061 aagcatttat cgctaattac aaaggtgggc atagcaaacg ttttcattta ccctccgata 3121 cggagactct aaaaaaatta aatgctgttc agtgtttaag ggagattgtg tcgaccgaac 3181 aagagaccgc tgctattgaa agactagtcg atgaactgtg tgaaaaatta aaggatattg 3241 agaaacgtag tcaagaactt aatgatgagg aacgctttct aatcgacacc aatttgaaca 3301 ttgaatcact accaacgacc agtgagggca atagccatca attaacgcaa gagcaggacc 3361 caaagcagca gcagcagtcc tcagtgattg gttttgatca acagcatcat ttttgccaac 3421 agcatatttt gcccgcgtcg tcttcgcagg ttgccgcttc gattgccata cactctcgtc 3481 gtctagtgcc accaagtaat gaaaatgttt taaacgacag cgacaacgat cccaagaaac 3541 gctatttccg tgcctttcct gcattgtcga aggaaatgga agattccttc cgcatatggc 3601 gtcgtaatgc aaaatcttta acttggccag ttgtgggacg tgcttcttct tcaattattg 3661 gtgacactgt tcgtgtccac aaatccatag actccagtag cggtaattta tacgccgaaa 3721 gccgtagcgc atgcgagaaa ggcattgaaa agagattgaa ggcggctagt ggtggaggtg 3781 ttgtcgatcc tgtggagggt tttcaaacac ataaaataag gccagaggtt ggcgcaggag 3841 atattagtag tggcagtgtg gtggcagtgg atgccattgg tggcgaagtt caaggagcag 3901 cggcaagtgc aaaaaagaaa tctaaacgtc gccgtaatca agctttgtgc aagggtaagc 3961 ccatccagag tatacgcaat aaagccccag ctggtggcag caattctaat acgtgtggct 4021 cagccagtgt ggcaacggct ggtggcggtg gtggtaaatt ctatagtcaa caccaaaatt 4081 atcgcaacac taccccagct tgggacactg atttcaaagg gtgctgggaa atggggccgg 4141 atctgattaa ggagtttttg gcccgccaaa agggagccac taaacgcagt cgcagcaact 4201 ccgatagctt ggatcaagag atgcgtaacg aatataagat gcttaatgaa atgcccaagg 4261 atgatgaatt gcttggcggt atagaacgac ctttgatgaa gcgctacata gatctaactt 4321 tttgttgtgg tgaggacgat gaacgcgcta actatgaagt gttggaggac ggtgttgatt 4381 atgttgatga ggactatgat gatgagaaca ctttggcttc catagaagag ctgacggcca 4441 gtggtgttgg tggcggcaat ggcaatgctc gacgtttgta tcagcgtgag ggtaaattgc 4501 agaaacctct ggtgatttgc aaccccatag aagagaatga catttttgaa gagacctcgg 4561 actcggtgga caatttagat tttgccaatt tcaaggccaa attcaacagc agcgttgagg 4621 ctttgtggaa agatgcagag ccgcctatga caaacaactc gacagccaac tctagtgctt 4681 acggtcaggt tgagagtggt gttgccgctg ctgctgctgc tgccaaagcc aacacaattg 4741 gaatttcttc ggctttttat gccaccacct cgctaaatgc tttggctcca ttcaaacagg 4801 atttgtggaa cttctggtcc aactacaatc aacatcacta cgaccagatg acgaaattct 4861 ccaacaccac ttcaaccgca tcgtccatga cgatgccgac aacgacaaca cgtttagatg 4921 atagtagcgc tagttctggc gctggcgccg atattgcaaa ttcaagtgat tacttctcaa 4981 tgcccagtaa tttggatgat ttcgacaagt ctgtgggtgc aatgcgtcgc gtaaatgaag 5041 ctggtgcttc catgggtgcc cacacaccct cgataagtgt attcttgcag aattccattt 5101 ggtcctcatc gggtgattgt gttgatgctg ttggtgctgc cgctgccgca gagacggatg 5161 aaagcttcct ctacaaagtg tggcactcga ataagaaatt aagtcaattg gatgtgggga 5221 aaaataaaaa cgaaaagatg gctcacatgg gaatgactga aggagataat ggtggaaatc 5281 gtggctataa taaggctaaa gaagccgtag gtaacttgga atcaggaggt ggtgctaaat 5341 tggaatttcc tccttacagt agtttgaagt ggtcggaagg aatcaatgcc gggccagctt 5401 ataataattt gcgctctcac atggcagcag cccataccga cttggagagc ctaaacaaaa 5461 atgatggcaa aattgttagt tttaattctg ctgcgggcac agtaacaggt gccacctggg 5521 aagccccggc ctttggggaa aactcacaac ctgacctcaa gtcttggtgc gcctccaatc 5581 ccatgtccct gaccgaaatg tatggcagcg atgtttgcga tagcataact gaagaaaatg 5641 agccgctgga aactggggct atggaaactt cggtcacatt gcccaatcac tgctctgcca 5701 ccagtggttt catagcctat tctcgcgtta aacaatgcgg cctcattcaa ccccaaagta 5761 agcccttgca gcttcaaagt gccaatgctg ctgctgctgc tgctgctcac ctctccaatg 5821 actactttcg tgggggtgaa gaggagaacc ttttgacttc ggagcgcaca cattttaatc 5881 ccatcgagac ctatgtggat ggtcacactt tcaatattag cagtgctctt gattcggtgg 5941 actttgaacg cagtgccagc ggatttttgt gctatgattc caatgaatat ttggaatata 6001 ctcgcaacga catctatttg gccgacgagg aggtggccaa tacgaatttg atgaatttct 6061 cggccaccgc ttcgtctcag atcactgatg gccgcgtaca tgttgccaaa gaaaaaccgg 6121 agtgcaggga aatgtttgtg ctgaagtttc gccttaggcg atcgggagag atagcttgtc 6181 aaacggagga aatcgacttt caattagccg ccgccaaaat ggccaacgat cagctgccac 6241 ccattgagag catggtggaa gtgcctatgt tttcccatac ctcgttgact ctgagccgac 6301 aggccaacaa tgaagccatt atggcggccg ttaccaaagc cgtggctgcc gcagccaaag 6361 cggcagctga acagggtctg aatgcaggtc atagttccct cgcttggata cccgccactc 6421 gcaacgattg cactcagtcc tgggtgcagg atgtctcgct ctgtgatgaa gtagattttt 6481 gcagagccac agcctctgcc gaacaattga gccaattttg gtccatgcaa gaggtggaaa 6541 agcaatgcca tcaacgccgt ttgccagcca gtgcttttca gcgctccgat ctggagagaa 6601 cggatgacaa ctccatggat aactcctcgc ataccctgtg gggcatgtgt gctgtatgca 6661 atagttgtga ttacggcaag tctttgccag cgaatcgtct gctgcgagat gaattgcaac 6721 gggaagccga tgaaataatg agtgatttgc gttatatgca agatctgtat ataggtgaag 6781 ccgattcggt agcagatacg gttatggccc atgaagtgga gggcgatagg aatagtgaaa 6841 ttttgaagaa tatagacaat gaaagggaac atcatcatca taagcagcag cagcagcagc 6901 cgaatgaagc atcagctgct gctgttgtag atcaagcaca ggcctcaatg ttgttgaagg 6961 ttaaccagtt gatagaggat ttacttaggc ccgagggaaa aacggcaaag ctcttcaagg 7021 caaaattcga agaaaagccg gagacggaga caccagagaa attgcctgtg gctgactggg 7081 ccatgaatat ggacgatgat gctgtagaca attcaagttc atggcatttt ggtggcagtg 7141 gcagagcaga cactgccgat ggccatgcca acttaagcaa catttggcaa catgaaccga 7201 ttgaccagaa caacactgag gccgaacgaa aacttgtctg tatgaaaccc atgaaactat 7261 tgcgccaagt aggaggttcc ctcaacgaag aggacttgta tgtggataat ttaaattggg 7321 aacatgaaaa tctggccaag atatggcaaa gggatacgat gcccagcgct gacacaactt 7381 cttccccaaa tgctgcaaaa gcagagcata aattggccca aagtgaggaa aacctggagg 7441 ataatcggaa tattgtagag caaaagaatt taaaaaatct acaaaataat gccacacata 7501 caccacccac agtttcttca agtagcaata gcaacagcaa tagtgccgcc gtgacataca 7561 aaagggtgca acattttctg aatagttcgg cggccaagtt aaaattggcg gcaaatcgca 7621 agaggcgtca ttcggcttcg caaaatttct atcatcatca aaaccagcag caagtgcagt 7681 cgcagcaaga gcaaaatttt cagtttggcc acagcaatag caacaataac aacaataaca 7741 acaacagcag cagtgccagt cacaattcta atcaaatcag cagcaataac aacaacaata 7801 atgtcaacat aaccgattta aatcgctaca aaaagacaaa cgaagaggag ctagcactat 7861 ctcttgagcc caagcaaaca attatcacct gcaaatattg gaccaccact acgaatggca 7921 cccaggcctc catggattcc gctgcggcag ccatgatgct tttggctgcc gctgcaaaca 7981 aatccaacgt tggcggcggc agcggcggag gcattatggc aaccaccaac accacaacga 8041 ccacctcaaa cacttacgaa gatactaacg atgaaggcat catgttggag gataatacat 8101 ttggtaatac cttttcttgt cttatcgata aaaatgcttc tatactgaaa catgtaatga 8161 tgacacgacc cctaacacgc taaacaataa tacaaaaaaa aaaatgcaaa tgtaaatgca 8221 aaccatattc tgaaactccc aaagtcccca aaagagaaac aaaagctaca aacttaagcg 8281 gcctatggaa agagaaatag aaaaaaagag agagaggggg cagccaaact cagaatccaa 8341 tatgatgcca taagccaagc ccttaaattg gcatgttgta gggaggtcaa tttttgagca 8401 aagaatccaa atccaaatca tgttttatat tcctactaaa actttctact ataagagccc 8461 cctctctaca atagccgctt gttataaact cttaaaaaat tttaaaaaat tcaaaaaagc 8521 caaaaaaata acaattgtgg agtacaatgt acttgtgaac aatgtaaaaa tccccacccc 8581 gccctcagcg ccccagctcc cttcaaaatc aacatagaaa aacagaaaat tttacttcaa 8641 atgttcagct cataaatatt tttctaaaaa aaagctacaa aaaaaacaat actttaggtt 8701 tttcataaca ctctcttaca agcatccccc tccccacaca aacatgtata ttgaaacttt 8761 tctaatctgt tttgtttttc tttttttttg tttaatgtta taaattttct ctgtataaaa 8821 aaattcacag taaatagtaa ctttttcttt tttgttgttc taaagaagaa atatttactc 8881 ttttttatct cttacaacat acccatatac atatacctac tattattatt tgatgtacca 8941 tacatatact attattatat gcggcttatt ttcttgtaat ttcgtaattt ataacagatt 9001 tataaaattt gttttctcta ttttccccct cctccaaaaa ccactctatt gtcccttgaa 9061 aagaaaaaaa aactcaaaaa aaaaacatgt taggttgaaa aaaatttttt ttttaaataa 9121 tttttgttgt taagataact gaaatggaaa ttttgcaaag aaaaactaaa tgttttgttc 9181 acaattttca caacaataaa agaaaaggaa acaaacaaaa gcaaaataaa aaatatcatg 9241 tgtaaagttt gaaatttttt gaaaaaaacg gaaccccccc aaaaaaagca atttcaccta 9301 aacacactca cacctacaca acagcaaaac tcaaacaaag aaaacatcat catcctgaag 9361 taaaataaag gattaataaa aaaaaaatca taaaaaaatc aaaattaaa