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LOCUS XM_013247832 2256 bp mRNA linear INV 02-SEP-2023 (LOC106084258), transcript variant X3, mRNA. ACCESSION XM_013247832 VERSION XM_013247832.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247832.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2256 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2256 /gene="LOC106084258" /note="T-complex protein 1 subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106084258" CDS 174..1781 /gene="LOC106084258" /codon_start=1 /product="T-complex protein 1 subunit beta isoform X3" /protein_id="XP_013103286.1" /db_xref="GeneID:106084258" /translation="MEMSLNPVRVLKNDAQEEKAEMARMSSFIGAIAIGDLVKSTLGP KGMDKILVSHGRQAGKVEVTNDGATILRCVGVDNPAAKILVDMSRVQDEEVGDGTTSV TVLAAELLREAEKLVDQKLHPQIIIAGWRMATKIAREALTQTSQDNSANNDKFKEDLM NIARTTLSSKILHQHKDFFAKLAVDAVLRLKGSGELHAIQIIKKTGGTLDDSFLDEGF LLDKKPGVHQPQRIEKAKILIANTPMDTDKIKVFGSTIKVDSLSKIADLEMAEKEKMK DKVQKILNHNCNVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVST FDNPSLVKLGECDVIEQVMIGEDTMLRFSGVKLGEACTIVIRGATQQILDEADRSLHD ALCVLAATVKESRVIYGGGSSEALMANAVFKKAAETPGKEAIAMEAFARALLALPTAI ADNAGYDSAQLVSELRAAHAQGKSTIGLDMEKGKIGDMKELGITESFAVKRQVLLSAS EAAEMILRVDDIIRCAPRRRVPDRGYC" misc_feature 201..1754 /gene="LOC106084258" /note="TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL)...; Region: TCP1_beta; cd03336" /db_xref="CDD:239452" misc_feature order(216..218,228..230,312..323,327..329,390..392, 396..398,408..410,420..422,429..431,1311..1313,1719..1739) /gene="LOC106084258" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239452" misc_feature order(297..305,462..464,474..476,666..668,1347..1349, 1401..1403,1521..1523,1650..1652,1656..1658) /gene="LOC106084258" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239452" misc_feature order(1461..1463,1515..1517,1542..1544,1548..1553, 1560..1562) /gene="LOC106084258" /note="stacking interactions [active]" /db_xref="CDD:239452" polyA_site 2256 /gene="LOC106084258" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taatagaagt tttatcactt aagggccaaa gatgctacaa ttagccaaaa ccaaaaagtt 61 aggttatgcc gaaagtcaca ctcctttaaa aacggtttga tgtatagggt tgccaacagt 121 cagttagttg ggaaacgcta taaaaccttt atcctggtaa cttttaaaac aacatggaga 181 tgtctttgaa tcctgtccgt gtgctcaaaa atgatgcaca agaagagaaa gccgaaatgg 241 ctcgcatgtc atcgtttatc ggtgccatcg ccattggtga tttagttaag agcactttgg 301 gacccaaggg tatggacaaa atcctagtgt cgcatggccg ccaagctggc aaagtggagg 361 tgaccaatga tggcgctacc attttgcgat gcgttggcgt tgataatccc gctgcaaaaa 421 ttttggtaga tatgtcccgc gtccaagatg aagaagtagg cgatggcacc acttcagtca 481 ccgtattggc tgctgagcta ttgcgtgaag ctgaaaagtt ggttgatcaa aaacttcatc 541 cccaaattat cattgccggc tggcgtatgg caacaaaaat tgcacgagag gctcttactc 601 agacttctca ggataactcg gccaacaatg ataaattcaa agaggatctt atgaatattg 661 cacgcactac actctcctcg aagattttgc atcaacacaa agacttcttt gccaagttgg 721 ctgtagatgc tgttttgcgt ttgaagggtt ccggagaatt gcatgccata caaattatca 781 aaaagactgg tggtactttg gatgattcat ttttggacga aggttttttg ctggacaaga 841 agccaggtgt acatcaacct caaaggattg agaaagccaa aatactcatc gccaacacgc 901 ctatggatac tgataaaatc aaagtattcg gcagtaccat caaagtagat tcactatcca 961 agattgccga tttggaaatg gccgaaaagg aaaagatgaa agataaagta cagaaaattt 1021 tgaatcacaa ctgtaatgtg tttatcaatc gtcaattgat ctacaactat cccgagcaat 1081 tgtttgccga cgccggtgta atggccattg aacatgccga tttcgatggt attgagcgtt 1141 tggctttggt tactggcggt gaaattgtct caactttcga taatccttcc ttggtcaaat 1201 tgggtgaatg cgatgtcatt gaacaggtga tgattggtga ggatactatg ttgcgtttta 1261 gtggtgttaa attgggtgaa gcttgcacca ttgttatacg tggtgccaca cagcaaattt 1321 tggatgaagc tgatcgctct ttgcacgatg ctttgtgtgt attggctgcc acagttaagg 1381 aatcccgtgt tatttatggc ggtggcagtt ccgaagcgtt aatggccaat gctgtgttca 1441 aaaaggcagc tgagactcct ggcaaggaag ccattgcaat ggaagctttt gcacgcgccc 1501 ttttggctct tcccactgct atcgctgaca atgccggcta tgactctgct caattggttt 1561 ccgaactacg tgctgctcat gcccaaggca aatctaccat aggtttagat atggaaaagg 1621 gcaaaattgg tgatatgaag gaattaggta taacagaatc atttgccgtt aaacgtcaag 1681 ttcttctgtc cgcctctgaa gccgctgaaa tgatattgcg cgtcgatgac atcatcagat 1741 gtgctcccag aagacgtgtt cctgaccgtg gttattgtta aactatttaa gacatatgtc 1801 atcttttaat cacatcagcc acaccctacg cctcatgttc tccttacatc ttaaacttta 1861 ttttaatatt tttttgttaa atccatgttt atttaattaa ccaaaaaaca catctaatta 1921 ttaaaacgct aactttctca ctaaactttc tgttctcctt cattgatttc aattaggcat 1981 tttacaataa ttttattcct taaaataacg gcatagcctt ttaagggaga ttcttttcaa 2041 acaaaaaatt atactaaaaa ttaatttttt gcctagtgca aaaaatacta tttgaaatgt 2101 gtcttaaatt acgcataaaa aataattcaa taaaccttat gtatttttaa tacactaaaa 2161 aatatcacac tcaatagaaa tttatttttc ggcttaagta ttgaacaaat ccctattttt 2221 agaaaataaa tatgactcgc gagtctatta acaaaa