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LOCUS XM_013247831 2170 bp mRNA linear INV 02-SEP-2023 (LOC106084258), transcript variant X2, mRNA. ACCESSION XM_013247831 VERSION XM_013247831.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247831.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2170 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2170 /gene="LOC106084258" /note="T-complex protein 1 subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins" /db_xref="GeneID:106084258" CDS 88..1695 /gene="LOC106084258" /codon_start=1 /product="T-complex protein 1 subunit beta isoform X2" /protein_id="XP_013103285.1" /db_xref="GeneID:106084258" /translation="MEMSLNPVRVLKNDAQEEKAEMARMSSFIGAIAIGDLVKSTLGP KGMDKILVSHGRQAGKVEVTNDGATILRCVGVDNPAAKILVDMSRVQDEEVGDGTTSV TVLAAELLREAEKLVDQKLHPQIIIAGWRMATKIAREALTQTSQDNSANNDKFKEDLM NIARTTLSSKILHQHKDFFAKLAVDAVLRLKGSGELHAIQIIKKTGGTLDDSFLDEGF LLDKKPGVHQPQRIEKAKILIANTPMDTDKIKVFGSTIKVDSLSKIADLEMAEKEKMK DKVQKILNHNCNVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVST FDNPSLVKLGECDVIEQVMIGEDTMLRFSGVKLGEACTIVIRGATQQILDEADRSLHD ALCVLAATVKESRVIYGGGSSEALMANAVFKKAAETPGKEAIAMEAFARALLALPTAI ADNAGYDSAQLVSELRAAHAQGKSTIGLDMEKGKIGDMKELGITESFAVKRQVLLSAS EAAEMILRVDDIIRCAPRRRVPDRGYC" misc_feature 115..1668 /gene="LOC106084258" /note="TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL)...; Region: TCP1_beta; cd03336" /db_xref="CDD:239452" misc_feature order(130..132,142..144,226..237,241..243,304..306, 310..312,322..324,334..336,343..345,1225..1227,1633..1653) /gene="LOC106084258" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239452" misc_feature order(211..219,376..378,388..390,580..582,1261..1263, 1315..1317,1435..1437,1564..1566,1570..1572) /gene="LOC106084258" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239452" misc_feature order(1375..1377,1429..1431,1456..1458,1462..1467, 1474..1476) /gene="LOC106084258" /note="stacking interactions [active]" /db_xref="CDD:239452" polyA_site 2170 /gene="LOC106084258" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actttaacaa ccctaactgc gcactccgct actcattaca aagaatcccc accataaagt 61 agtagtgcat aaatttttcc gaacaaaatg gagatgtctt tgaatcctgt ccgtgtgctc 121 aaaaatgatg cacaagaaga gaaagccgaa atggctcgca tgtcatcgtt tatcggtgcc 181 atcgccattg gtgatttagt taagagcact ttgggaccca agggtatgga caaaatccta 241 gtgtcgcatg gccgccaagc tggcaaagtg gaggtgacca atgatggcgc taccattttg 301 cgatgcgttg gcgttgataa tcccgctgca aaaattttgg tagatatgtc ccgcgtccaa 361 gatgaagaag taggcgatgg caccacttca gtcaccgtat tggctgctga gctattgcgt 421 gaagctgaaa agttggttga tcaaaaactt catccccaaa ttatcattgc cggctggcgt 481 atggcaacaa aaattgcacg agaggctctt actcagactt ctcaggataa ctcggccaac 541 aatgataaat tcaaagagga tcttatgaat attgcacgca ctacactctc ctcgaagatt 601 ttgcatcaac acaaagactt ctttgccaag ttggctgtag atgctgtttt gcgtttgaag 661 ggttccggag aattgcatgc catacaaatt atcaaaaaga ctggtggtac tttggatgat 721 tcatttttgg acgaaggttt tttgctggac aagaagccag gtgtacatca acctcaaagg 781 attgagaaag ccaaaatact catcgccaac acgcctatgg atactgataa aatcaaagta 841 ttcggcagta ccatcaaagt agattcacta tccaagattg ccgatttgga aatggccgaa 901 aaggaaaaga tgaaagataa agtacagaaa attttgaatc acaactgtaa tgtgtttatc 961 aatcgtcaat tgatctacaa ctatcccgag caattgtttg ccgacgccgg tgtaatggcc 1021 attgaacatg ccgatttcga tggtattgag cgtttggctt tggttactgg cggtgaaatt 1081 gtctcaactt tcgataatcc ttccttggtc aaattgggtg aatgcgatgt cattgaacag 1141 gtgatgattg gtgaggatac tatgttgcgt tttagtggtg ttaaattggg tgaagcttgc 1201 accattgtta tacgtggtgc cacacagcaa attttggatg aagctgatcg ctctttgcac 1261 gatgctttgt gtgtattggc tgccacagtt aaggaatccc gtgttattta tggcggtggc 1321 agttccgaag cgttaatggc caatgctgtg ttcaaaaagg cagctgagac tcctggcaag 1381 gaagccattg caatggaagc ttttgcacgc gcccttttgg ctcttcccac tgctatcgct 1441 gacaatgccg gctatgactc tgctcaattg gtttccgaac tacgtgctgc tcatgcccaa 1501 ggcaaatcta ccataggttt agatatggaa aagggcaaaa ttggtgatat gaaggaatta 1561 ggtataacag aatcatttgc cgttaaacgt caagttcttc tgtccgcctc tgaagccgct 1621 gaaatgatat tgcgcgtcga tgacatcatc agatgtgctc ccagaagacg tgttcctgac 1681 cgtggttatt gttaaactat ttaagacata tgtcatcttt taatcacatc agccacaccc 1741 tacgcctcat gttctcctta catcttaaac tttattttaa tatttttttg ttaaatccat 1801 gtttatttaa ttaaccaaaa aacacatcta attattaaaa cgctaacttt ctcactaaac 1861 tttctgttct ccttcattga tttcaattag gcattttaca ataattttat tccttaaaat 1921 aacggcatag ccttttaagg gagattcttt tcaaacaaaa aattatacta aaaattaatt 1981 ttttgcctag tgcaaaaaat actatttgaa atgtgtctta aattacgcat aaaaaataat 2041 tcaataaacc ttatgtattt ttaatacact aaaaaatatc acactcaata gaaatttatt 2101 tttcggctta agtattgaac aaatccctat ttttagaaaa taaatatgac tcgcgagtct 2161 attaacaaaa