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LOCUS XM_013247828 9450 bp mRNA linear INV 02-SEP-2023 (LOC106084257), transcript variant X1, mRNA. ACCESSION XM_013247828 VERSION XM_013247828.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247828.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9450 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9450 /gene="LOC106084257" /note="E3 ubiquitin-protein ligase HECW2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106084257" CDS 623..5614 /gene="LOC106084257" /codon_start=1 /product="uncharacterized protein LOC106084257 isoform X1" /protein_id="XP_013103282.2" /db_xref="GeneID:106084257" /translation="MGEYGMDSRSQKLLKMACSTQQLVVGESDDGNLVEANKYNERNN RTDNNSSSNETAEVYEVLQANNNNDGGDNKPQNNVNKLKPAANSQVILLTQPHTTSAA NATKGAKEGSVNVGDTNSDDGEQENNQTFYEATGEPELVLTLANTLEITNDVTSRPET AATQLAPTQQNHAATMKDDDNEVIDEQQTQLKLPANNSTDNECMPSHTANVAAIVGLR DNDDDEECEGAVGVTSNVPTDVEIYSSNLENDITVSKEESEEPIVILRKKRGRTLKDY NHINQQTSVAAAEDEQAQKQRQQTLLTTKSCETPASATTLSPTNSYNGSIGSDGGGSV GGGARRKSWTLSPQSGTSTPLSGARKKEKRASVKSPASSTPTTSTATDSFNLWIAREC YETVPAETVFEVDSNQGLVGSANFTIDEEADEEAAAVESLLGAAAALHASASASKEAQ IQRRQKHLRQPQHRPLERSWPPRAIGRDFRLQGDVFKFDILDTDDSMDIYGGVCGPNG YGSNSNSTNNSPLYLLNSANSSNSSNSSPQYELNATPSPPAMKFKPLIKKKIGPDSYI NTISTKKVPASETYEFPAFPTKENTSNTQFPQTPSTSALRQHRPLTRTLSNGKSAYED RQSHSPSRLMLSPKRHRSPPSGCSTRSASPLDFQLSPDAQVLTCGQQQISGIGSGTAS PVLHSRPQQRLLKRVGGVGAGAAASSGLICPPTPTHHARRQARMQQAAASAAMNNNLD DTYIGTGTPSGGGGGCAGALGGQTHASHLDYNYLSSRTPPSSPAFHASANTRISDDRS RSAELMHLGATAAAAAATSHIEVVDNDEDDGNASDDMGIVHITSTRLPSIPERGAAGG LLRTSAIFSAEADGSNINASAEPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGTNGS ATLNGPAGREQHHRQQLDRRYQSIRRTITNENRSNASAPNVDNTQTSQSPHAMPHNNN HQNAPSNFQHVSLSVHPAVLMLCRPDFYSMLHTNEDALAIYNRNTALKHMVIRIRRDP SCFQRYQYNKDLVALVNSFAQLNRDLPSSWETKLDQSGKQFFIDHNNRQTSFMDPRLP IECPRIIRHRQHHPQFDALDGNCMSAANPPLPPPRPSSTSSSSSATNTSRQSQFLQND NMPHYTSSSTSSSPYNNGPSSSNAISANNGYNEVPVAYNEKVIAFLRQPNIIEILRER QGQNNVSRSLREKINILRVEGVPALERLAHDLQLTILLSLFEQEIMSYVPIEERSPQG SPVLNSRMMQRAPPPFRRDFEAKLRSFYRKLESKGYGQGPHKLKLQIRRTHLLEDAFR RIMSANKKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTY TVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDLE SLDSEFHQSLQWIRDNDIGTGIDLGLTFCVTEELLGRVVERELKPGGKNIIVNEKNKK EYLERMIKWRLERGVQEQTESLVRGFYEVVDSRLVSVFDARELELVIAGTAEIDINDW RLNTEYRSGYHDNHQVIIWFWQVIEKFTNEQRLRLLQFVTGTSSIPYEGFSALRGSTG PRRFCIEKWGKPNALPRAHTCFNRLDLPPYPTPELLYEKLLLAVEETNTFGIE" ORIGIN 1 ctaaactcga tttgcgaaaa tgttagcgca gttaaattaa acaaattatt ttaattggag 61 gaatgtgact agatttctct ataaaattga taaaattaac aagagttcca atcaaagcaa 121 tcaaaatgaa catttcatga gtaattatcg acgtcgggag agttcggtgc taattagtat 181 tgcaaaaata gcgaataata gtttttaaat aataaattta gcaaaatggg aatatgattt 241 gttcctaaat gaaaatgtag aaataatttt tgttcaataa aaattcacaa aacggcgaaa 301 cgacaaagag cactttttaa attacattta ttgaggtcgc ccgtgttccg cagcgaaaaa 361 atctataatt ttttgaaagt ggagcagatg tatgaaaacg aaaattgaga ctagcaaaat 421 tgagtgtgat tcaatgttgc aggaaaaatg agaccaaaac aaaaaatacg aaaattcatt 481 gttatggaaa tgccgggaaa tgtaaagata atttttttaa gttaaaagaa gaggaggctg 541 atgcctctta cggaatttga tagttgcttt caactatatt gaccaatgtg gtcctaaatg 601 ggtgaacatt tctatctcac aaatggggga gtatggaatg gacagtcgca gtcaaaaact 661 cctcaaaatg gcatgtagta cacaacaact tgttgttggc gaaagtgatg atggcaatct 721 agtagaggct aataaataca atgaacgaaa taatcggact gacaacaaca gcagcagcaa 781 tgaaacagca gaagtatatg aagtattgca ggcgaacaac aacaacgatg gtggcgacaa 841 caaaccgcaa aataatgtaa acaaactaaa gccagcagca aattctcaag tcatactact 901 tacacaaccc cataccacct cagcagcgaa tgctacgaaa ggcgccaagg aaggcagtgt 961 taatgttggc gacaccaata gcgatgatgg cgaacaagaa aataatcaaa ctttttatga 1021 agccacagga gaaccggaac tagtgttgac attggctaac actttggaaa taacaaatga 1081 cgtcacatca cgaccagaaa cggcagcaac acaattagct ccaacacagc aaaatcatgc 1141 tgccacaatg aaagacgacg acaatgaggt gattgatgaa caacaaacgc aactaaagtt 1201 gccggccaat aactccacag acaatgagtg tatgccatcc cacaccgcta acgtagctgc 1261 catcgtcggt ctacgcgata atgatgatga tgaagagtgt gaaggcgctg ttggcgtgac 1321 atccaatgtt ccaactgatg ttgaaattta ttcatcaaat ttggagaatg atatcacagt 1381 ctcaaaagag gaaagcgagg agccaattgt gatattgcgc aagaaaaggg gaagaacttt 1441 aaaagactac aatcacatca atcagcaaac ttcggttgca gctgccgaag atgaacaggc 1501 tcaaaagcaa cgtcaacaaa ctcttttgac aacaaaatcc tgtgaaacgc cagcatcggc 1561 aaccactctc tcaccaacga actcatataa cggtagcata ggaagcgatg gtggcggtag 1621 cgtgggtggt ggtgcacgac gcaagtcatg gacattgtca ccgcaaagtg gtacttcaac 1681 acccctaagt ggggctagga aaaaggagaa gcgagcaagt gtaaaatcac cggcttcatc 1741 aacaccaacg acatcgacgg ctacagattc ctttaatcta tggatcgctc gtgaatgcta 1801 tgaaacggtg ccagccgaaa cagtgtttga agtcgatagc aaccagggct tggtgggatc 1861 agctaatttc accatagatg aagaggcaga cgaagaagca gccgcagttg aaagtttatt 1921 gggggcagca gcagcattgc atgcttcagc cagtgccagt aaagaagctc agattcagcg 1981 tagacaaaaa catcttcgac aaccccagca tagaccctta gagagatcct ggccccccag 2041 agccattgga agggattttc gtttacaggg tgacgtgttt aaatttgata ttttagatac 2101 ggatgactcc atggatatat atggtggtgt ttgtggcccc aatggctatg gcagtaattc 2161 caatagcacc aacaattcac ctctctactt actgaacagt gcaaattcca gcaattcctc 2221 aaactcaagt ccacaatatg agttaaatgc tacgccctct cccccagcaa tgaagtttaa 2281 gccactgata aaaaagaaaa tagggcccga tagctacatt aatacgataa gtaccaaaaa 2341 agtgccagca agtgaaacct acgagtttcc ggcatttccc acaaaggaga atacttccaa 2401 tacacaattt ccacagacgc cttcaacgtc agctttgaga cagcacagac cattgacaag 2461 aacactatcg aatggaaagt cggcctacga agataggcag tcacattcac ccagtcgcct 2521 aatgctttca cctaaacgtc atcgtagccc accatcggga tgctctacac gcagtgcttc 2581 cccattagat tttcaattga gtccggatgc ccaagtttta acttgtggtc agcagcaaat 2641 ttccggtata ggtagtggca ctgcctcgcc cgttttgcat agtcgtcccc aacaaagact 2701 cttgaagcgt gtgggaggtg tgggggcagg agccgcagcc tcatctggtc ttatatgtcc 2761 accaactcca acgcatcatg ccaggcgaca ggcacgtatg cagcaagctg ccgcatcagc 2821 agctatgaac aataatctcg acgatactta cataggtaca ggaacaccca gtggaggtgg 2881 gggtggttgt gctggtgcct tgggaggcca aactcacgct agtcatttag attataatta 2941 tctttcctca cgaaccccac cttcttcgcc agcttttcat gcgtctgcca atactcgaat 3001 ctccgatgat cgctcacgct ctgcggaact catgcatttg ggagccactg cagccgcagc 3061 cgcagctaca tctcacatag aagtggtgga taatgatgaa gatgatggaa atgcctcaga 3121 tgatatggga attgtccaca taacaagcac ccgattgcct tcaatacctg agagaggagc 3181 agcaggtggt ctgttacgta ctagtgccat attttcagct gaagctgatg gcagcaatat 3241 caatgcaagc gctgaaccct tgcctccggc ttgggaggca cgaatggata gtcatggccg 3301 cattttttat attgaccata ccacaaggac cacatcttgg caaagacctg gcaccaatgg 3361 ttctgccacg cttaatggac ccgctggcag agagcaacat catcgccagc aattggaccg 3421 cagataccag tcgattcgtc gcaccattac caatgaaaac cgttcaaatg catccgcacc 3481 taatgttgat aatactcaaa cctcgcaatc accacatgcc atgccccaca ataataatca 3541 ccaaaatgca ccatccaatt tccagcatgt ctcactgtct gttcacccag ctgttttaat 3601 gctatgccgt cccgattttt actcaatgct tcataccaat gaagatgctt tggccattta 3661 caaccgcaat actgccctta aacatatggt tatacgtata cgccgtgatc cgtcgtgttt 3721 tcaacgttac cagtacaaca aggatctggt ggcactggtc aattcctttg cacagctcaa 3781 tcgagatttg ccctccagct gggagaccaa attggatcaa tcagggaaac agttcttcat 3841 agatcacaac aatcggcaaa cttcgtttat ggatcctcgt ttgcctattg agtgtccccg 3901 tataatacgc catcgccagc atcatccaca gttcgatgcc cttgatggca attgtatgtc 3961 ggcggcaaat cctcctttgc ctccaccaag accatcatcg acctcatcgt catcgtcggc 4021 gaccaacacc tcaagacaaa gtcaattttt acaaaacgat aatatgcctc attacacctc 4081 atcttcgaca tcctcatcgc cctataacaa tggacccagc tcatcgaatg caatatcggc 4141 aaataatggt tacaatgaag ttcctgtggc ctacaatgaa aaagttattg catttttgag 4201 acaacccaac ataattgaaa tactacgaga acgccaaggc caaaacaacg tttcgcgatc 4261 cttgcgagaa aaaattaaca tacttcgtgt ggaaggtgtg ccagcattag aaagattggc 4321 acatgatcta caattgacca ttttattaag tctcttcgaa caggaaataa tgagctatgt 4381 gccaatcgaa gaacgcagtc cccaaggctc tccggtgctc aactcgcgta tgatgcagcg 4441 tgctccaccg ccattccggc gtgatttcga ggctaaattg agaagtttct atagaaaact 4501 tgaatcgaag ggatacggcc aaggacctca taaattgaaa ttacaaattc gccgtactca 4561 cttgctggag gatgccttcc gacgcattat gtctgccaac aaaaaagact tacaaagagg 4621 acgcttagct gtactctggg atactgaaga gggtctcgac tatggaggac catcaagaga 4681 attcttcttc ctgttatccc gtgaattatt caatccctac tatggtctct ttgaatattc 4741 tgccaatgac acttacacgg tacaagtgtc gccactttct gcttttgtag ataattgcca 4801 cgattggttc cgctttagcg gtcgtgttct gggcttagct ttagtgcatc aatacctatt 4861 ggatgccttc ttcacacggc cattttataa ggctttatta agacttccgg tagctttaag 4921 tgatttagaa tcattggata gtgaattcca tcagtcattg caatggatac gtgacaatga 4981 cattggtacg ggtatcgatt taggtctcac cttctgtgtc accgaagagc ttttggggcg 5041 tgtggtggaa cgtgaactca agccaggtgg caagaatatc atcgttaatg agaaaaacaa 5101 aaaggaatac ctcgagcgca tgatcaaatg gcgcctggaa cgtggtgtac aagagcaaac 5161 ggaatctttg gtacgtggct tctatgaagt cgtagattct cgtctggtat cggtattcga 5221 tgcccgcgaa ttggagctgg tcatagccgg aacggcggag atagacatca acgattggcg 5281 ccttaatacc gaatatcgat cgggttatca tgataatcat caggtgatca tatggttctg 5341 gcaggtcatt gagaagttta caaatgagca acgcttgcgt ctattacaat ttgtcaccgg 5401 tacctcaagc ataccctacg aaggtttttc agcattacgc ggttcaacgg gtccacggcg 5461 tttttgcatt gaaaaatggg gtaaaccaaa tgccttgcca cgagcccata catgtttcaa 5521 tcgtctagac ctaccaccct atcccactcc agagctgttg tatgaaaaac ttttactggc 5581 tgtagaggag acaaatacct ttggcattga gtaaatcttc agttgttttg ctttttctcc 5641 attcgattta aatttcaact atggtgtgtg tgtgaggcgc aagaagaatt gaagaagttg 5701 agtaaaacaa gtgaaaaacg tgatattttt aatgtccttt agttattatc gatatatatt 5761 ccaatattat attataatga ttatatttaa aataattatt aaatgtagat gtgctcgtgt 5821 gttttgtcca tctagttaag attatctaat ttaagtattt atttacaaag tgaaatattt 5881 tttattttcg attacagcta tgactataat ttatttgaaa ttagttttta cacaaaaaaa 5941 aaatattata gttggccatt ttattagaca ttatgattat tattatgata ataatgtgga 6001 tggacccaaa atgtatagca tagttgttgg cccataccta gtagtttgat actttgcctg 6061 accaattggt atttcaaaca tcatttattc aaaataatct ttagggtttc tctgcaagtt 6121 tttagctttt tgttcaacct ttccgtattc ttgtcttttt agtcattagc attgtaagtg 6181 atataggaaa aaaaatcaac aaagaattaa acaaactgag atgtttgtca acacattcct 6241 cattttaagc aaaatggtcc atagttactc gcaaacatat ttctttatag aatatttcca 6301 gaaatgattg gtagtttttg ccattttcaa catatatgcc gggaaacatt tcgatcctta 6361 ttttaacgat tcgctttact atatttaaag atgtcaaatg tttcaatttt tcaaggatac 6421 attttctttc atagaagatt ttttacttta tattaagaaa taattacctt caaatttagt 6481 ataatacata cttaactttt aaactaaagt taaaatatag tcttgccttt gagaaaagta 6541 cagcattgta ccttagttat gaaaataagc ggtgttatac actgaggcgg cagcccttcc 6601 cgatgaaaaa ctccatcggg tcaatccggt acgtacaatc ggctgtcatg ggattgccat 6661 ggagttcggt gtacttggct acagctttta acatggtcca aatttgaaaa ttatttatat 6721 tcatattgaa ctctcaataa tcatccatta gaatcccata ttgtttcgtt tcctcaaaaa 6781 ttaacccaca tttttatata attttcatat actgatctca aactgctttt gtttgagccc 6841 catcctgccc cgttcggtgt atatgtgcat ttggtgtata attttggggt gggcgacccg 6901 cctgggattc tacttccaat aacctttcat ttgataccca tattgcccaa tcggtaaagt 6961 tgtgaatttt tggacggttt ttggtgtggg gcgggccccc aatactaaag gttaaattga 7021 tgtaacaagt tcctactcca ctcttaaata cctttcattt gatacccata ttgtctcaat 7081 cgatagacat gtccgtttgg ttgggttttc ggatggggcg tcccccatgg ttatttgacc 7141 ccaaagcttt aaccaattat gtgtttttgg gatatcataa gttgatacac ataaattcac 7201 ttaaatcgag atcacccatc tccgcgatct ggcgtttttg gaaattgtga ttagggtgag 7261 tctctgcccc ctcgcggata tcacaaaatg aagtacccta ttttaagcgg gggctaaact 7321 ctacaatctt tgaaaatttc atgaaaatcg gttcagcctt tttgagtcta ttttgaacaa 7381 acaaaaaaaa gcgcaacact ttcattatta tataatagag gtccttattc taaagtctgg 7441 tttctcaatc tgtaaatcat tagcaaaatc cttaggtaaa ggaagaaaaa tcttaaattt 7501 ttgtactttc taccttataa tgggaggaat actaactttg tcattccgtt tgtaacaact 7561 cgaaaacaga tctaagccat catgaagcat tgtccccatg gttacgacca gtggggcata 7621 gtttggcaga actgattgaa ggctccacat tctgcacggc gaatgagaag ggtgcagcag 7681 ctcgccagat atttcctttg tatcccttgt tctcctgaat gacgtatctt ggcaagccgc 7741 cctttcttta ggatctgacc actttcccat aattctcacc atccaccgag tacccgactt 7801 cataacctct gagcgccgaa cgtttatcaa tcaaaacaag gtcgattggg tcggcttcag 7861 agagtacacc aatcgccgcc tcccatcaaa cgtgctaatt gccgagggga aattccaagg 7921 catcattaac gcatcatccg ctcgttttat accagtcagt cgattatccc aaatgtggcc 7981 caatattccg gcgcaggcaa tgctactcat agtcgagcgt gatgggattc tttgcacgga 8041 cccactaacc ccagaatcag ctagctgaat ctggcaataa acagggtagt caacgaacat 8101 aagcggaata tgtggttgaa attcttgaag gcacggatag ctgtaagcac cacacaggct 8161 ggtacattga ggttcgcttt tcattacgtt cacaggttgc aaatagtgga atgctccata 8221 cggggtagct gcaacacatt ctccccacgt gccacagtaa tttgcgatga ggtcaaaagt 8281 agaaacaaag tcctcaaatc acttaccggc agcacttggg gtgctgacaa agaaactggc 8341 tatttcctgg tagaataata ttcagatctg tcagaatgcc gctcttcgaa ctgctacggg 8401 ctgtctcctc agttctcacg tggactacct ccaccagaag tcaacgatct tacccgtgcg 8461 aagacataac tacatgctgt ccaagcaata ccttctgggc tgttatcgca aggaccatag 8521 aaatcatcat cttgtggata gttatacacc gcccagaagc cttgaggtgg gtgtacatga 8581 tctcgagcga gagaaatccg gcagttctag acagcattat gcaaacacgg tagcagatgc 8641 gttgaatagc cactgggtta atatggtcct tggagaacga ctgcctccca ttgcaaatgc 8701 aaatttgccc atgaacattt cattaaggga caggggcaaa cttcgcaaat attaatgagt 8761 gcagtctgat tcaaacttaa gctcaatgat aaggggcctc ctttttatag tcgagttcga 8821 acgatgtgcc acagtgcgac acctctttgg ggagaagttt ttacatggct tctatgcatg 8881 catggagggg aaaaccaccg ctgaaatttt tttttctggt gttctcgcca gggttcgaac 8941 ccggacgttc agcataatag gcgggcatgg taacctctgc ccctccattg catttatagc 9001 acaccgcaat ttggctttaa aaaaaacaaa gttttttatt ttgctttcta ttctacaaag 9061 aatccaacaa ccgaaataaa aagtaacaaa acaacttaga agtttttttc aagaaaccat 9121 ggataaaaac caaggttctg gaccaaatgg aatatgcctt tgccatctgt tgttgttatt 9181 gttgtagcaa tgtgttatac actgaggcgg cagccgatga agagctccat cgggtcaatc 9241 cggtacgtac aaccggctgc catgggatcg ccatttgttg tgttaacagt tttctaacgt 9301 cgaatattcg ggcaccatca catggtatat tcgcaaagtt tatatgatgc tgaagctttt 9361 ctgcaacaag gaactgagtc aatgttcgct tttcgaatcg aacgctggat taatgtcttt 9421 catgttgttt ttacaacact aatttatggg