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LOCUS XM_013247819 4509 bp mRNA linear INV 02-SEP-2023 regulatory subunit alpha (LOC106084251), transcript variant X4, mRNA. ACCESSION XM_013247819 VERSION XM_013247819.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247819.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4509 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4509 /gene="LOC106084251" /note="probable phosphorylase b kinase regulatory subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106084251" CDS 330..4172 /gene="LOC106084251" /codon_start=1 /product="probable phosphorylase b kinase regulatory subunit alpha isoform X4" /protein_id="XP_013103273.1" /db_xref="GeneID:106084251" /translation="MRSRSNSGVRLDYYQRVVHRLIMSHQEPVTGLFPASNVNSHAWI RDNVYCILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVEKF KITQNPLDSLHAKYSSSNGQPVVGDSEWGHLQIDAVSLYLLILAQMTASGLQIVFSLD EVSFIQNLVFYIESAYCIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLF GARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDPHLI RNTKDAILQRLQGKYGCKRFLRDGYRTPKEDPTRLYYERWELRMFENIECEWPLFYCY LILFHAFQNDKLSVKEYADRLEKIMVRGDDGILLVPESYAVPPDAVSQEYRHPGSAPR EVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE IRDKLAESDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLTGRKSRDVGILSTS KLYSLKNRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFLTNNWRHMLGRPTITLM ATHYMLDQDKIPLAMIQTMRKLKSGYINGTRVMLGNLKDFLNTSAITDLSFLGSTEDG YPDRLHPDVQAYLDEHLLRSFSHRSSMMNLRGGHLRPRQLRRRMSCKGAIKKTRSINV DTDTLGMEGPTPLTERRLSSVIAPPWLQANKQAHHSVFATTPEEGSNNHSSSNVLIRE NIYPIDINHSRSSLEKRSEFNRYSELQNVPKILVQRHRPETNFADTEVEELIAMLRET ENLEEQGDILQYLVDTQGLDFNTEIDSTLLEEALVYETAMKNPLFAKPPLPPSVMVEG GSASHNATINLSQSEGMLEEGRVVTVRDLLKGLYEKACQQKLWGLVRHTAGMLGKRVE DLAKAVTDLLVRQKQVTVGMPPNNEYTITAPLPEADLRQLIHDAYGDDESTAMLTQEL MVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDGEAASEHLLNLSPFEMK NLLYHILSGKEFAVSSVARGNLSIVSCKSSRVSKKSQIGLGDPEGEDAIIATIDDRQG QWLRRRRLDGALNRVPRDFYSRVWSVLEKCQGLAIEGRILQQSLTQEMTPGELKFALE VETALNQIPQPEYRQLVVEALMVLTLVTEHNLVPNLGNVIYVEHLVHKANQLFLEDQR KVQGDATLCCAKSKDGKEQHQAASGMLLCGGAAYICQHLYDSAPSGSFGTMTYMARAV ALVLDCVPKHGEMECSIS" misc_feature 351..>1646 /gene="LOC106084251" /note="Glycosyl hydrolases family 15; Region: Glyco_hydro_15; pfam00723" /db_xref="CDD:395586" misc_feature <2970..3320 /gene="LOC106084251" /note="Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain; Region: Bac_rhamnosid6H; cl46875" /db_xref="CDD:481215" misc_feature 3351..>3875 /gene="LOC106084251" /note="Phosphorylase b kinase C-terminal domain; Region: KPBB_C; pfam19292" /db_xref="CDD:437124" polyA_site 4509 /gene="LOC106084251" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atctttggca ctgattgatt tgacattgtc gtgacatttt acatatttac aaagaaaaaa 61 aaattgtgaa aactgcagaa cgcaaacctc gaattttatc tgcaaattac taaatattta 121 caaacattgg gaacaaaata atatcaaaat ctaagaagga cggaaaagac aactcgccta 181 aagaggattc aattcaattt aggttttatt aaaatgctaa agactgcatc aggagatata 241 taatagatcg gaagaagatc agtgggaaat actatttaaa ttatctgtgg gtgtaaattc 301 gacaaatact caccaacaac tacagcaaaa tgcgttctcg cagcaattcg ggcgtacgcc 361 tggactacta ccaacgtgta gtccatcgct tgattatgtc ccatcaggaa ccggtgactg 421 ggctgtttcc tgcttcgaat gtcaactctc atgcttggat aagagataat gtttattgca 481 tattagctgt ttggggtctc tcaatggcat ataaaaaaat tgccgatcag gatgaagatc 541 gggcaaagtg ttatgaattg gaacaaagct gtgttaagct tatgcgcggc cttcttatgg 601 ccatgatgaa tcaaaaggat aaagtagaaa aattcaaaat aacacaaaat cctttggact 661 ctttgcatgc taaatacagt agtagcaatg gccaacccgt ggtgggtgat agtgaatggg 721 gtcatttgca aattgatgct gtgtccttat acctcctgat tttggcccaa atgacagctt 781 cgggcttgca aatcgttttc tctttggacg aagtgtcttt tatacagaat ttggtattct 841 acattgaatc agcctactgt attcccgact atggcatttg ggaaagaggt gataaaacta 901 atcatggtga acccgaactt aatgccagtt caattggtat ggctaaagct gctctagaag 961 caatgaatga attggactta ttcggtgcac gtggaggtcc ggctagtgtc atacatgtgc 1021 tggctgacga ggctcataaa tgtcaagctg tattgcaatc aatgttgcct cgtgaatcga 1081 atagtaagga gttggattct ggtcttttgt gtgtaattgg ttttccagca tttgctgttg 1141 atgatccaca tcttatacgt aacaccaaag acgccatact acagcgtttg cagggtaaat 1201 atggttgcaa acgttttcta cgtgatggtt atcgcacgcc caaagaggac cccacacgat 1261 tgtattacga aagatgggaa ttgcgtatgt ttgaaaatat tgaatgcgaa tggccgttat 1321 tctattgcta tttgatattg tttcatgcat ttcaaaatga caagctgtct gtaaaagagt 1381 atgcagatcg tttggagaaa attatggtgc gtggtgatga tggtattcta ttggttcctg 1441 aaagttatgc tgtgccccca gatgctgtat cacaggaata taggcatcct ggctcagcgc 1501 caagagaagt agtgggccgt tgtccattcc tatggggcca atcattgttt attttaggaa 1561 gacttttaca agagggtttt cttgctgttg gtgaattgga tcctttgaat cgtcgtttgg 1621 gggctcaaaa gaaaccagat gtggttgtgc aagttgtcat tatagccgaa gacaacgaaa 1681 tacgcgataa gttagcagag tctgatttac atgtacagac cattgccgaa gtggcaccca 1741 tagaggtgca accagctcga gttctaagtc atttgtacac ctatttggga agaaaccgta 1801 aattgggctt aaccggacgc aaatcacgtg atgtgggtat attgagtaca agtaaattgt 1861 actcgctgaa aaatagaata tttgccttta caccacagca tatcgattat gaagaatatt 1921 ataccacacg tgatcccgac ttgcttgcaa gtaatttcac caccaattta gctttcctaa 1981 caaacaattg gcgtcatatg ttaggaagac ctactataac cctaatggcc acacattata 2041 tgctagacca agataaaata cccttggcca tgatacaaac aatgcgtaaa ttgaaatccg 2101 gttacataaa tggcacccga gtaatgttgg gcaatttaaa agattttctc aatacatccg 2161 ccattacgga cttaagtttt ttgggtagca ctgaagatgg ttacccagat cgtttgcatc 2221 cagatgttca ggcctattta gatgaacatt tgttgcgttc atttagccat cgtagcagta 2281 tgatgaattt gagaggtggc catctacgac ctagacagtt gagaagacgt atgtcatgca 2341 agggcgctat aaagaaaaca agatcaatta atgtggacac cgatactttg ggcatggaag 2401 gccctacccc tttaaccgaa agacggcttt catctgttat tgctccacca tggttgcagg 2461 ccaacaaaca ggcacatcac agcgtttttg ctaccacacc tgaggaaggc tctaacaatc 2521 acagctcatc aaacgtattg atcagggaaa atatatatcc cattgatatt aatcacagcc 2581 gctcatcttt ggaaaaacgc agtgagttta atagatattc ggaattacaa aatgttccca 2641 aaattcttgt tcaacgccat cgtccggaaa caaatttcgc cgacacagag gttgaggagt 2701 taattgcaat gttgcgggaa acagaaaatc ttgaggaaca aggtgatatt ttgcaatatt 2761 tggtggatac ccaaggattg gatttcaata cagaaattga tagcacactt ttggaagaag 2821 cacttgtata tgaaactgct atgaaaaatc ctttgtttgc caaacctcct ttgcctcctt 2881 ctgtgatggt tgaaggaggc tccgcttccc ataatgctac tattaattta tctcaatctg 2941 aaggaatgct ggaagaaggt cgtgtagtca ccgtacgcga tctactaaaa ggcctctatg 3001 aaaaggcttg tcaacaaaag ctatggggtc tggtgcgtca cacagctggc atgttgggta 3061 aacgtgtcga ggacttggcc aaggctgtta ccgatttgtt ggtacgccag aagcaggtaa 3121 cagttggcat gccgccaaat aatgaatata ctataacagc acctttgccg gaagctgatc 3181 taaggcaatt gatacatgat gcctatggtg atgatgagag tacagccatg ttaactcaag 3241 aactaatggt ctatttggcc atgtttatac gcacagagcc ccaactcttc catgagatgt 3301 tacgtttgcg tgttggtctt attattcaag ttatggccaa agaattatcg cgcaccctta 3361 attgtgatgg tgaagctgct tccgaacatt tgttgaatct atctccattc gaaatgaaaa 3421 acctcctata tcacatttta agtggcaagg agtttgcagt tagcagtgtt gctcgtggaa 3481 atctctccat tgttagttgc aaatcgagtc gtgtaagtaa gaaatctcaa attggtttgg 3541 gtgatcccga aggtgaggat gccattattg ccactattga tgatcgacaa ggtcaatggt 3601 tgcgccgccg acgtttggat ggtgctttaa atcgtgtgcc ccgtgatttc tattctcgtg 3661 tctggagtgt tttggaaaaa tgccaaggtt tggctattga aggtcgtata ttgcaacaaa 3721 gtttaactca agaaatgact cctggagagt tgaaatttgc tttggaagtt gagacggctc 3781 taaatcaaat tccccaacca gaatatcgtc aattggtggt ggaggcccta atggtgttaa 3841 ctctcgtcac cgagcacaat ttagtaccca atctgggaaa tgttatctat gtcgagcatt 3901 tggttcacaa ggcaaatcaa ctatttctgg aagatcaacg caaagtgcaa ggtgatgcca 3961 ctctatgttg tgccaagtca aaggatggaa aagaacagca tcaagcagct tcgggcatgt 4021 tgctttgtgg tggagctgct tacatttgcc agcatttata cgacagtgcc ccaagtggca 4081 gttttggcac catgacatat atggcacgag ctgtggcctt agttttggat tgtgttccta 4141 aacatggcga aatggaatgt tcaatttcct aacttaattg tttattaaat tattttaata 4201 ggttagtttt gttgtttttt tttgctgaat gttgaacttt aattcgcaca tcgtacatcc 4261 ggtaactcga atttttttat gttaaaattt atatataagc taaatgtttg tacgtaaaaa 4321 tatgcatacc ttaaagtaaa ggcagaccgt cctaaatcga actacttcct tgtatgatga 4381 aaagttatat tgtccgcaag taaactgtgt tttaaaaaat tttataattt ggtcatagaa 4441 attttatcta cgttattgga aaatatctct aaattaagaa ataaaactat gaaatcataa 4501 taacttaaa