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LOCUS XM_013247765 4626 bp mRNA linear INV 02-SEP-2023 (LOC106084217), transcript variant X4, mRNA. ACCESSION XM_013247765 VERSION XM_013247765.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247765.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4626 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4626 /gene="LOC106084217" /note="gamma-tubulin complex component 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106084217" CDS 214..4251 /gene="LOC106084217" /codon_start=1 /product="gamma-tubulin complex component 6 isoform X2" /protein_id="XP_013103219.2" /db_xref="GeneID:106084217" /translation="MNPMPKYFKGIKPLESPDNPYLPKFIFEGEKDQLLAVDNKFTVA CSSNEYDSECSFTGMTNRLLGTSMRINMNSLQLFPKSFKKPQIKTVRPVSSTHVNDSD SEKNGISKKIFSWNWEGLACFGISCTNPFAGDTNASLLLKSHLSQKGNVKFEAKIVAE KDFITDLKSLTVGIQSNSFKHDEFIVFHMEKNVCIAGVLPETIKYAVAEFIECGTCYK RLQTMILKKDYKLMFDGFMFKALCSAIDEYLLTFRQYVFGKNDDHILGFYKRIKKMIK QLTSLSYTLAVHPNVDDNFKPPMGSQFLGYLYKEIMRTTENDFLAILIFIMKRCCHVY FKHLQKWIYYGLLDDPCNELFVGFVDHYRENTKYFYDKAYFVRREVVPGFFQNFEEEI LQCGKYTMLLKAYNPNHPIFDLEYPSISVCLCVAELEKLELSCKEYFENAKKLCLNPI TIQMIFESRSEEKRQLFQRMSERSRANLERWTDEQNEIALLAAERKKQRLEELSAQLH DAKQRKMLERKVSVENELKYLREAEKLEEQRTAIENINLRKRIEYYQELHDIIKDKEH RNNLTLLIPAAATAQPSPRTPASAGTDFESCCGEDEEQSSDYEECVSEECAEKLSEIK DISEQSEKQECNKESILENEIHQELVHAVDLINCNSENIAVDNGNILQQNRQKIMSGH NMEHCTTASTEIALKKSSTVASSFALESTLKINTAGTADNKEMPLTEAQKNKFKVLSD EFQIQISNQTHRTKSMPDVNLNDVQDEELSELQRNRRRMMQNDLFSEYNKDPEPRSVN LYLPLDTDRARNRKKVLESEYNILTGMANMATVDTPMSTASDDIPLTETLSEIEADKD NGNISKNNDSGTPGSTVDVGIDTLKLNVTMRPDNTKESALTTPYTCLPSTPESALNTA GIRAKQGFTFPSADCQKTCIEVAFNNDSLQREDACPQPDYNQPYKRCEQLIATNFRCN TTSPYIRLNSSNNHSNSTHKSPTLTEFLTEFLQKSVVTPMGTHLELVNNEVMRMFLVD LKVLDHFRSLRNYFFMMDGEFGSIICDGIIGKLEDGAKPQKLLNYQILHSILDTALGS SITGKNKNAENLSFIVNDVPEKFELSSPDVLNNLSLSYCINWPLNLILNPETLEQYAN IFKYLVRVRRISWILEKAYQILKESVKKNGKDLLKSPQYRHVQLIRHKFYHFVHALQN HITGNALQASWKTFKDELLSAKTIEDLYRKHTTYIKRILFLCMLNKRSAEFYNTIENV FKIAIRFYNNLKSREFKIKPGETYHTHSRYEKLVNDEVEFNKFIKYTIYLGTKIVRHG YQAEIGEFINLINYNQYYMKSSLYN" polyA_site 4626 /gene="LOC106084217" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccgtgatat atttgtatat tgctttggat tttagtttag aatggcagac tatttaactg 61 tacaggttgc gccggagaaa cctaacttat ttaaaaaact cccgaacgcc tattccgcgc 121 agtccagatt tattggtgcc tggccctttt accctgtatg ctgactataa aaataataaa 181 agctatcccg tactaaatga atggactgac ataatgaacc caatgccgaa atatttcaaa 241 ggcataaaac cgttggaatc ccctgacaat ccatacttgc caaaatttat attcgaaggt 301 gagaaagatc aacttttggc agtagataat aaatttacgg tcgcctgttc ctcaaatgag 361 tacgactcgg aatgttcctt tactggaatg actaatcgct tgttgggaac ttctatgcgt 421 ataaatatga attcgcttca actattccca aaaagtttca aaaaaccgca aataaaaaca 481 gtcagaccag tttcaagcac acacgttaat gattcggata gcgagaaaaa tggtatttcc 541 aagaaaatat tttcttggaa ttgggaagga ttggcttgtt tcggcatatc atgtacaaat 601 ccatttgctg gagatacaaa tgcgtcattg cttttgaaga gtcatctaag ccagaaaggg 661 aatgttaaat ttgaagcgaa aattgtggct gaaaaagatt tcataacaga tttgaagtct 721 ctcacagttg gtattcaatc aaattcattc aaacatgatg agtttattgt gttccacatg 781 gagaagaatg tatgcatagc tggggtgttg cctgaaacaa ttaaatatgc cgttgcagaa 841 ttcattgaat gtgggacgtg ttacaaacgc ttgcagacaa tgattttgaa gaaggactat 901 aagctaatgt ttgatggatt tatgtttaag gctttgtgta gtgccatcga cgagtacctg 961 ttaacattcc gtcaatacgt attcggcaaa aatgatgatc atatattggg attttataag 1021 cgtatcaaaa agatgattaa gcaattgacg agtctatcct acaccctagc cgttcatccc 1081 aacgttgacg ataattttaa gccacctatg ggatctcaat ttctgggcta tctgtataaa 1141 gaaataatgc gtaccacaga gaatgatttt ctggctatac taatttttat aatgaagagg 1201 tgttgccacg tgtatttcaa gcacttacaa aagtggatat actatgggtt gctggatgat 1261 ccttgtaatg agcttttcgt aggctttgta gaccactaca gagaaaatac gaaatacttt 1321 tacgataaag cttatttcgt gcgaagggaa gttgtacctg gtttcttcca aaattttgaa 1381 gaagaaatcc tgcaatgcgg aaaatacacc atgctgctga aggcctataa tccaaatcac 1441 ccaattttcg acctggaata cccctctata tccgtatgtc tttgtgttgc cgaactcgaa 1501 aagttagaat tatcctgcaa ggagtatttc gaaaatgcca aaaagctttg tctaaatcca 1561 ataactatac aaatgatctt tgaatccaga tcagaagaaa agcgtcagtt gtttcagcgc 1621 atgagcgaaa gatcgcgcgc caatcttgag cgatggacag atgaacagaa tgagattgca 1681 cttttggcgg ctgaaaggaa gaagcaacgt ctagaggaat tatcagctca actgcacgat 1741 gccaaacagc gtaagatgct agagagaaag gttagtgtag aaaatgagtt aaagtatctg 1801 agagaagcag agaaacttga ggaacaacgc actgccatag agaatataaa tttacgcaaa 1861 cggattgaat actaccaaga attgcatgat attatcaaag acaaagaaca caggaacaac 1921 ttaactttat tgataccagc tgcagcaaca gcccaaccat ctcctcgaac accagcgagt 1981 gctggcacag actttgagtc gtgctgtggg gaagatgaag aacaaagttc ggattatgag 2041 gaatgtgtct ctgaagaatg tgctgaaaag ctaagtgaaa taaaagacat ttctgaacaa 2101 agtgaaaagc aggaatgcaa caaggaatca atcttggaga acgaaatcca ccaagaacta 2161 gtccatgctg tagatcttat aaattgcaat agcgaaaata ttgccgtaga caacggtaat 2221 attttacagc agaatcgtca aaaaattatg tcaggccaca atatggaaca ttgcacaaca 2281 gcctcaacgg aaattgctct aaaaaaatcc tcaactgttg cttcgtcctt tgctctggag 2341 agtactctca agataaatac agcaggaaca gcagataaca aggaaatgcc gctgacagag 2401 gcacagaaaa acaaatttaa agttttaagt gatgaatttc aaatccaaat atcaaatcaa 2461 acgcatcgca ccaaatcaat gcctgatgtt aatcttaatg atgtgcagga tgaagaattg 2521 agtgaattac agagaaatcg ccgacgtatg atgcaaaatg atttgtttag tgaatacaat 2581 aaagacccgg agcccaggtc agtcaatctg tatttgccct tggacactga tcgagcaaga 2641 aatcgtaaaa aagtattaga aagtgaatat aatattctaa ctggaatggc aaatatggca 2701 acggttgata cgccaatgtc taccgcatct gatgatattc ctttaacgga aaccttgagc 2761 gaaatcgagg ctgacaaaga caatggaaat atttctaaaa ataatgactc tggcacgcca 2821 ggttccacag ttgatgtcgg cattgacact ttaaaactaa atgtaacgat gcgcccagac 2881 aataccaaag agtcagccct aaccactcct tatacatgtt tgccttcgac gcctgagagt 2941 gcactaaaca cggcaggcat tagggctaag cagggcttca cttttccaag tgctgattgc 3001 cagaaaacat gtatcgaagt tgcttttaat aatgattcac tgcagagaga agatgcctgc 3061 ccgcaaccag attacaatca gccgtacaaa cgttgtgagc aactgattgc gacgaatttt 3121 agatgtaaca caacgagtcc ttacatacgc ctcaatagca gcaacaatca ttcgaatagt 3181 acacataagt cccccacact tacagagttt ttaactgagt ttctgcaaaa gtccgttgtc 3241 acaccaatgg gcacccattt ggaattggtc aataatgagg ttatgcgtat gtttctggtc 3301 gatttgaaag ttttagatca ctttcgaagc ttgcgtaatt acttctttat gatggatggc 3361 gaattcggct ccattatatg tgatggcatc attgggaaat tggaggatgg ggccaaacca 3421 cagaaattgc taaactacca aatattgcat tccattttag acacagcatt aggatcgagt 3481 attacaggaa agaataagaa tgctgaaaat ctctcattca ttgtaaatga cgtgcctgaa 3541 aaattcgaac taagttcacc cgatgtatta aataatctca gccttagcta ttgcatcaac 3601 tggcctttga atctcattct taatccggag actttggaac aatatgcgaa tatttttaaa 3661 tatctagtgc gcgtacgtcg cataagttgg atcctagaaa aagcctatca aatactgaag 3721 gagagcgtca agaaaaatgg caaagaccta cttaaatcgc cgcagtatcg gcatgttcaa 3781 ctaatacgcc ataaattcta tcatttcgtg catgccttac aaaaccacat cacaggcaat 3841 gctttgcagg cctcgtggaa aactttcaaa gacgagctgc tgagcgccaa aacaatcgaa 3901 gatttatatc gcaaacatac cacctacata aagcgaattt tgtttctatg catgttgaat 3961 aaaagaagtg ccgaattcta caacaccata gaaaatgttt tcaaaatagc catacgattt 4021 tataataatt tgaagtcgcg cgagttcaaa ataaagcccg gcgaaactta tcatacacat 4081 tcccggtatg aaaagttggt caatgatgaa gtggagttta ataaattcat caagtacaca 4141 atatatttgg gcaccaaaat tgttcgccat ggctatcagg ctgaaattgg tgaattcatt 4201 aatttgatta actataacca atactacatg aaatcaagtc tctacaacta gctaaacaaa 4261 aaaaaaagtt attgaaaagt atgtattgtt gtttatggtt agataatcgg ggacattttg 4321 gaaaaataaa ttgttgtgtc atttctaaaa cataccagat ttgtctccca tttcttatag 4381 catatctcaa agttaaccac atcccccgat accaacgaaa catgttatgt gaaaagctga 4441 tgttgaaata aaaatgatgg aataaatttg ttcgatcgga aggtatcgta catacataca 4501 tacctggcct acatttcgat tagagcatgc aaaagtgaca gcacatacat atgcctgttg 4561 tctaatagca cctcaaacaa atgcacaaaa agttgttata aatgaaataa attaaattaa 4621 cagtta