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LOCUS XM_013247703 5172 bp mRNA linear INV 02-SEP-2023 transcript variant X9, mRNA. ACCESSION XM_013247703 VERSION XM_013247703.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247703.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5172 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5172 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins" /db_xref="GeneID:106084176" CDS 344..1291 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X5" /protein_id="XP_013103157.1" /db_xref="GeneID:106084176" /translation="MYRGERMWRMSHSLPSGMSRYAFSPQDTDFTSSYPGPSAMNPRG GRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGGGDPQGVNGTNLIVNYLPQD MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRN KRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGSIVQKNILRDKLTGRP RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAEEHGKMKAHHFMNQLGMGPP AAPIPAAGPGYNNMVHRAYNYSGLLDGFYRNKSYHYPYL" misc_feature 353..1222 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" ORIGIN 1 gtaatcgatt aggaattcag tttgcttcct cccgcttgcg atttgtattt tattttttcg 61 cttggcacgc gctgtgtgta ttccgtgatt ccggatcccg tggatcgtct tgtgtaataa 121 tttattatca ataaaataaa ttattaaaag gcttgtgtgt atacgtgtct gaaaaaaaca 181 aaaataaaaa ataaaaaagg aaaaagaaac agcaacagca aaaataaaat cacaatttaa 241 catcaccaca gcagcataca tcggcagtaa aggaatagtg ctgaaaatta aaggaaaaag 301 attcaataac cggcaccgca accagagaca tcagtcttta aatatgtatc gcggcgaacg 361 tatgtggcgc atgtcgcact cactgccctc tggcatgtca cgttatgcgt tttcaccaca 421 ggacacagat ttcacgtcat cgtatccagg cccctcagct atgaatccgc gcggtgggcg 481 tggtggttat aatgattttt caggtggcgg cagtgccatg ggctccatgt gcaatatggc 541 gccagcgcat agcacaaatt ccatcaatag tggaggagat ggtggcggcg gcggcgatcc 601 ccagggcgtc aacggtacca atttaattgt gaactatttg cctcaagata tgacagatcg 661 cgaactatat gcgctgttta gaacgtgtgg tcccatcaac acttgtcgaa tcatgaaaga 721 ctataagact ggctacagtt ttggttatgc ttttgttgat tttgcttccg aaattgatgc 781 ccaaaatgcg atcaagactg tgaatggtat tacagtgagg aataaacgta taaaggtttc 841 atatgcccga cctggtggtg aatcaattaa ggataccaat ttatatgtca ccaatttgcc 901 acgtacaatc accgacgatg aactggagaa gatctttggc aaatatggca gcattgtaca 961 aaagaacata ctcagagata aactaaccgg tagaccgcga ggtgtagcat ttgtaagatt 1021 taacaaacgt gaagaagccc aagaggccat atcagcttta aataatgtta taccggaagg 1081 tgcctcccag ccattaactg tacgactggc cgaggagcat ggcaaaatga aagctcacca 1141 ttttatgaac cagttgggta tgggcccacc ggcagcgccc ataccagcgg ctgggccagg 1201 ctacaacaac atggtgcaca gagcgtataa ctattctgga cttttggatg gtttttatcg 1261 caataaatcc tatcactatc cctatttata attcagccat actttagtgt aaataatagt 1321 ttaaaaatat ataaattact tagtattaca tactacatat ttaataactt gtataatgcg 1381 cttaggttta aattgtataa ggacaactaa tttttaaaaa taacttaatt taattattta 1441 agctcatgcg ttatgtttaa aaatttacta ttattttttt attattatta aaattttgaa 1501 taggaacaac aacaacaaca actaagaaag catactttat aaaagaaact tgtgtaaatt 1561 aatatgatgc gacaattgtg ttgttttcta catgaaagac taaaatttga tttactagta 1621 ttacaaaaaa caaaaaaact aaaacaaaaa agatgtaagt atatttactc gatgtaaatc 1681 cctacaccac tgtgttatat tattttctga actcattatg ttgaattttc atagtttgta 1741 ttttgtttat agttttaata aaacaaagac tggaattttt taaatttgtt tttcttttct 1801 tttctactat tatctttgtt gtcataaagg tttttgtctg atttgaaatt tttgttaatt 1861 ttttccattt tcccctcaag agtggcataa tttagatata tcaacctaat tctgtaagat 1921 tcatgaagat gtctgcaaac cttctttaat ctccatattg acatttaagc cctatggcta 1981 ggcagggtat cgggtaggtt ataggtttta ctttcccttt gacttgtgat tatcacgcga 2041 atgggacgta aaactacaca aaaatccgtc ataagatttc tgaaataaaa ccaaaaaagt 2101 tttacaccgc aacaaattcg ttttaacgct tagtatgcgt gattgaaatt gagttgaaga 2161 attcaactca aagggcaggt ctgtataaca atcatctatt gtataaagat atgtgtcgaa 2221 atgaagtcaa tctggcatga cttagcgaaa tcccattcta tgaaaagcca agataaaata 2281 gaacagtaat gggcacacta acatagttga aaaaaataat aaattgtgtt ttgtatgggg 2341 gggcagttaa tcttgaccaa tcagccaagt gcaaaaaaaa aaacaacaat gcaatgtaaa 2401 ataacaacaa tgcgtcgagc gaacgaaggc acacgaactg cttacactat ttgtgcgctt 2461 ctattcgttt tttctctgcc tgcgtgcata gcaatttatg tgcggttata tgttattgcc 2521 catctatgaa agagaatatc ggtttttagt aacaacagca aaatatttgc taaggtagct 2581 catacccttt acttggccaa aattaagcga aatgcgataa agaagtacgc aaaatgtatg 2641 ttcaagaagt ctaatcacaa attgggttta tatggcaggt acatataagt aaacaaggat 2701 cgatataaac cacagttgat atgggtttcg agagattaaa atagatttat tacaactaat 2761 gtcaccaaaa tcgtacaaat caataaaaag taaagaaatg ggcaaagccg aatgctagat 2821 ttgcacaacg tgcaaaaatt taattattta aaggcgccaa tagcccgcct tgccataccg 2881 agtatcatag gcactcagtt ttaatgcaaa gctagtcccg tccggtctct cactgagtct 2941 ctccgctcaa taccgctgat tgtttgctac tgccgttgaa gctactccgt atggagcatt 3001 ccactatctg caacctgtga atgctccacg tagctctcag ctaagcttct cgagacaatg 3061 atgaacacca cacagatagg atctcaaagt tccagcctgt atggtgctca cagctatccc 3121 gtgccggccc taattattct ccatttcatg cacctaagtc ggttgaagta tggtattgtt 3181 accatctaag tgccgttgcc tgttagcagc aaaggccggg ccagtatata ggaaatgctc 3241 caacgtctta tcatcttccc ctcgtgccct acatatgcta tcacttgccg cactaatttg 3301 gcgtaagtga gctcgtagtt caatgtgtcc cgttttgata ccgaaagtta tactgatccc 3361 tttttttact tcctttcaat aatagactcg tcctcccacg atccggatct tctcatagga 3421 ttttcgtggt cctaccgaac gctcgcatcg attacgccct tgactcggac ttcgtcgaga 3481 cgctagaaaa ccattgatat tcgctccatg cgatagtttc gatattttcc ttcatagtat 3541 atattcgata gtatcgacaa atttgttaaa tatgttatga aatgttaaaa gaaaacacgt 3601 aaaaacgtgt aaattcgacg agctttgaat atccactatg tacctgtaca acagctatac 3661 tcgagctata tttgaaaaaa gattatatta aaaacgcctt acaaatgtat gttctgagaa 3721 ctctaaaccc ggctcttggg cctttctgac ctaatactgt cacacaaagt tggcatttcc 3781 cacataggcc cttaacccgg tggcgcacgg gatctcactg agactctcca ctcgatacca 3841 ctgattttct acgactgcaa ttacagttac tccgtatgga gcattccact atccgcaacc 3901 tgtcgacgca cccggtagct ctaaactgag cttctcatga caacaatgaa cgccacatag 3961 atcggagcaa aaagtgaacg cctgtgtggt gctcatagct atcccgtgcc actcatccat 4021 aggagtggcg aaaatatgac cgcccgcggc gtcgctgtgc cacttggcta ctacgactta 4081 aagtgtctta ccaatcagga atatacatat attttttgtg gggtcttaga ccaatattac 4141 gaggtgtcac aaatcgaatg acaaagttgg tataccccca ctcctatggt ggagggtata 4201 aaaatgctgc cagcattagt aaggtggtaa aagcagcaaa caaatttaat tgatgttctc 4261 accagtattt gaacccaggc gttttatgtt gtatccatat tcataaattc acaaaatttc 4321 aaatatctgt acacaactgt caaaaaaaaa aaagattctt tagatagggt tatggcgttt 4381 tcgttcttat tcgtcgaaaa tgtgtgtatg ctacatagtc gtacatcgga ctttccgaca 4441 gggcatctct gcttataact atgactatgt tataacggga ccaggggccg ttttgaatcg 4501 gcattaaata ggaggtccct ttttgttgat tcttttttcc ggatggacgg aaatggctag 4561 tttgattaat atttgcgatg tgatgcagtc aaaatgattt ttatggaaat gtttaattga 4621 gatattctat ctgtttgaca atatttagca atacgagtat acaaattagt tgttttatta 4681 agacgctttc tgaggagatg aagtagcgtt catcgaaact aatctgtcaa ccctgctcgc 4741 aacaattcat agtttgataa gctatgaaat cgtttaagac gaacgaagac ttaaaaaagc 4801 ttgactaata aacaatgttc ttagcttgac taatgactaa ctaaaaatac aactattttt 4861 attggaaaac aatcagtgaa ctcattatga acttcttcta gattattcat tatgcatatg 4921 ttaatgaata aaactattaa aaaacgaatg aatataataa taatacttaa ttgttaattt 4981 ttttcttaca aaattattat tcaatagatt ggtattaaaa aatagaaaat ttttatttaa 5041 ttttatgcaa agatttttat ctaaaaaagt taaacattta aataaaatct taaaaacact 5101 acaaaatgag aaaaacctaa atcagtttaa aaagtacaaa aaaataatta atctttaaac 5161 cctaattttc ta