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LOCUS XM_013247700 5025 bp mRNA linear INV 02-SEP-2023 transcript variant X6, mRNA. ACCESSION XM_013247700 VERSION XM_013247700.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247700.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5025 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5025 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins" /db_xref="GeneID:106084176" CDS 138..1139 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X2" /protein_id="XP_013103154.1" /db_xref="GeneID:106084176" /translation="MYGQNIRNVAYNPYGYNGYRQSGERMWRMSHSLPSGMSRYAFSP QDTDFTSSYPGPSAMNPRGGRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGG GDPQGVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFA SEIDAQNAIKTVNGITVRNKRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG KYGSIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE EHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRGRHNKIRNQKMHPYHNPQKFI" misc_feature 138..1136 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" polyA_site 5025 /gene="LOC106084176" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtaatcgatt aggaattcag tttgcttcct cccgcttgcg atttgtattt tattttttcg 61 cttggcacgc gctgtgtgta ttccgtgatt ccggatcccg tggatcgtct tgtgttttta 121 tacttttcgt ttgagacatg tatggccaaa acattcgaaa tgttgcttac aacccatatg 181 gatataatgg ctacagacag agcggcgaac gtatgtggcg catgtcgcac tcactgccct 241 ctggcatgtc acgttatgcg ttttcaccac aggacacaga tttcacgtca tcgtatccag 301 gcccctcagc tatgaatccg cgcggtgggc gtggtggtta taatgatttt tcaggtggcg 361 gcagtgccat gggctccatg tgcaatatgg cgccagcgca tagcacaaat tccatcaata 421 gtggaggaga tggtggcggc ggcggcgatc cccagggcgt caacggtacc aatttaattg 481 tgaactattt gcctcaagat atgacagatc gcgaactata tgcgctgttt agaacgtgtg 541 gtcccatcaa cacttgtcga atcatgaaag actataagac tggctacagt tttggttatg 601 cttttgttga ttttgcttcc gaaattgatg cccaaaatgc gatcaagact gtgaatggta 661 ttacagtgag gaataaacgt ataaaggttt catatgcccg acctggtggt gaatcaatta 721 aggataccaa tttatatgtc accaatttgc cacgtacaat caccgacgat gaactggaga 781 agatctttgg caaatatggc agcattgtac aaaagaacat actcagagat aaactaaccg 841 gtagaccgcg aggtgtagca tttgtaagat ttaacaaacg tgaagaagcc caagaggcca 901 tatcagcttt aaataatgtt ataccggaag gtgcctccca gccattaact gtacgactgg 961 ccgaggagca tggcaaaatg aaagctcacc attttatgaa ccagttgggt atgggcccac 1021 cggcagcgcc cataccagcg gctgggccag gctacaacaa catggtgcac agaggtagac 1081 acaataaaat tcgtaatcaa aaaatgcatc cctatcacaa tccccagaaa ttcatataaa 1141 ttcaaatcgc aaatcgattt tcaaactaga actcttctac aagtatgata agatgaaaac 1201 aaaagtactt tatatgcata catatataat atacatacat acatatatac acactcacat 1261 acaattatat agatgtaccc tttgaatagt aacgacgata atgcatccac acaaaatcgt 1321 gaggcatatt taacggacat agttttagtt tttttcttct cttcttcttc ttatcaaaat 1381 atatcgtcat agcaatacga gatacggttt tgcgtagact tcactttcta ttagcccccg 1441 gcccggtctc tagctgggcg gacaaacaat gacatacatc atacacgtgt atcgaacaag 1501 aatatgtttt tgttttgttt tttttttttt tttttttaaa tataagaact aacttcataa 1561 taatataaaa tagtgttttc taacggaaag atacaacctt tacataggat atcgtgttta 1621 tgatgcaaaa aaacaaaaac aaactaaaat gagaaataca aattgaagaa ttgagttttt 1681 atccacagca aaaggcagag taattattac tcacatgtat tatggcaata ttatagcact 1741 tctcctccca ctactataac catttttgaa tttatgattg tattaataat aaaattatat 1801 ttaactgaag taacaaatta tgtttaatgt tccctcgaaa gaaaagtgtt accccccgcc 1861 tatcgagcac taacaattgg aattaatatt agaaagctta aacttgatac cggttgattc 1921 agttgttgga tttttaaccc aacacacaga aaaggagggc acaaaagctt ttctccatta 1981 ttaaatttga aaatatgaaa ctggttcact tgcaattact tgttatataa ggaatgattt 2041 ccttctactt ctctcaagga atgatttccg attccgaagt tttagctcaa cgatagtgac 2101 attcttttta cgaacgagtt cgaatgttgt gccgtcatgt tctcctcttg gaagaaacgt 2161 tttatgtaaa ccctaatatg gaccaattta acgtttttat ttcgtgagct catggaaagc 2221 tattttttga tgcaacttta atgaatttgg aagctgtgaa gtgtgtacat cacttgttta 2281 ttcatttata gtgcgagatt tccgttattc gttagagatt tccgcaagtg taaatatcac 2341 tttatcatat caatatcact ttaagaacaa tccatggtgg tgggtatacc cattggccta 2401 gccaatttgt gctgttttca cttgctgcaa acattgttgt cttcgtatat tttatgcagg 2461 taaacaatta aggcctcaaa gtgaaaacag aatataacaa caaactcaaa gtagaacaaa 2521 accacaggga ttaagagtct tctacttgtt cttacttttt ttttttaaat ttttttttat 2581 gcttcttcgt taaatgcaat aatagattga aaatttattt taaatcatat tagtttggtt 2641 caaataaaaa tcatatatta cgaacaagac agtttcacac cattttctaa cgtcaagctc 2701 tcctctgaat caaaataatt ttgtggaaaa acaattgttg gtatcgatta taagtatgaa 2761 gttcaaatat aaatttccac ataggaaagc aattggatgt gtccaactaa cccggaaggg 2821 aatcgaacaa ttgatttaat tagccactat tacttgcgga aaataaatga ctctatgctt 2881 tgtccgtggt tctgccaact ttgcaaatct atttcaggct gctaataatg gtatatgatg 2941 taagtgggtt taaccaacca attaccgact atgtactttt ttttagaata taagtctaag 3001 ccattgcagc actctgtccg catgtccgcc tatgatgtcg aacgcctgtg ttcaaatgct 3061 ggcgagaaca taagaaaaaa aactgtgaga ggtggttaca ccctaccctg cgtccccctt 3121 gtcattaagc ttgaacttga atcggacagc acccattgat aagtcagaag tttgtccctg 3181 ctccttaatc agttgcattg acttcgtata gaactacata gatatgtacg tatgtatgta 3241 taccttgtct gctaactatg ggaattgtct tcgaaatccc acaacattgg aaatgaataa 3301 gaaaaagaat ttgggctaag aacaattaat gttctatctc cttcagctaa gtttaatgat 3361 cttgtatgta ttccatgtaa caaaatctga aaactgagtc tatttatgct cccaaataga 3421 acatatacat tacgtcggta gaatgctgtt ttgttccata cgccactttt acacacttga 3481 agtttgcaaa atacacaaaa tatttggcat atttacacct caatatctcg gaaactaaat 3541 acggtacgaa ttgaacatca gaaaatatac acagaaaaaa aatagcaaaa aaattttcaa 3601 tttaaaattt tattgaaaat taaatcgatt tcaggaggcc accgtagcgt agaggttagc 3661 acgtccgcct gctgatccga tgctgaacgc ctgggttcga atcctggtga gaccatcaga 3721 aaaaattttc agcggtggtt ttcccctcct aatgctagca acatttgaga ggtactatgc 3781 catgtaaaac ttctgctata aaaaggaggc cccttaccat tgagcttaaa cttgaatcgg 3841 actgcactca ttgaagtgtc agaaatttcc cccgtgttcc ttagtggaat gttcatgggc 3901 aaaatttgca tgtacaaaat cgtttccaat taaaaaattg attgattcaa tcatttttga 3961 attgaatgtg acttttttcc aattacagtc gtgattgaaa attttaccat tttcaattaa 4021 aaaactaatt gattcaatta attcaattca attgaatctg aaaattggtt gattcaatca 4081 tttttgtaat cgaatcttaa aaaaattttc aaatacggtg ctttagtaaa ttcaattaaa 4141 agctattttg tcccctacga tagaaatgga aggagatttc acccatgcgt ccaacaattc 4201 gacaaatcta tatcatgaca gccgcttcta cgttccggat taatctgatg gagtccttca 4261 ttggccaagg actaaccacc acaacacact gcacgggata accatgagca ccacacttgt 4321 ttgaactttg agctccaatc tgtgtgttca ttgttatcac gagaagctta gcttcgagct 4381 accgtgtgca tccacagttt gcgtatagtg gaatgcccca tacggagtag cttcaacgac 4441 agtcagagtg cctatgtgcc tatcggtatt ggcgccttta aataaccaat ggccatcttg 4501 ttcccgcggc gatcgatcct ttggaccgga acgaccgacc gcccgatttg agatcttgag 4561 ctcctataag tcgcaattgt tatccgattt ggctgaaatt ttgccggtga tgttctgtta 4621 caatttcaaa agccgtgtca aggagaatcc aaatcggtct ataacctgat acagcctcca 4681 tacaaatcga tctccggatt agtcttctaa agcttcaaaa attggctatt tctaaaactt 4741 caaataattg gcaaaaaggt gagaggtaga gtacacatgt gcccttcaac tatttttttt 4801 ttaacaattc catggcagct ggttgtacgc actgctgcaa caacaactaa attttaagtt 4861 gggtgtgggc tctcaatatt cggctcagcc gagtcggacc gatttttctt ttttaatatt 4921 taatattacg tacgtatcac acgatttgtg aattttttag agttgccaca tttgaaaata 4981 catatgagaa tatatatcgt ttaataccac ctttagcaca ttaaa