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LOCUS XM_013247697 5028 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013247697 VERSION XM_013247697.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247697.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5028 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5028 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins" /db_xref="GeneID:106084176" CDS 144..1148 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X1" /protein_id="XP_013103151.1" /db_xref="GeneID:106084176" /translation="MYGQNIRNVAYNPYGYNGYRQSGERMWRMSHSLPSGMSRYAFSP QDTDFTSSYPGPSAMNPRGGRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGG GDPQGVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFA SEIDAQNAIKTVNGITVRNKRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG KYGSIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE EHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRAYNYSGLLDGFYRNKSYHYPYL " misc_feature 144..1079 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" ORIGIN 1 gtaatcgatt aggaattcag tttgcttcct cccgcttgcg atttgtattt tattttttcg 61 cttggcacgc gctgtgtgta ttccgtgatt ccggatcccg tggatcgtct tgtgtgttag 121 tttttatact tttcgtttga gacatgtatg gccaaaacat tcgaaatgtt gcttacaacc 181 catatggata taatggctac agacagagcg gcgaacgtat gtggcgcatg tcgcactcac 241 tgccctctgg catgtcacgt tatgcgtttt caccacagga cacagatttc acgtcatcgt 301 atccaggccc ctcagctatg aatccgcgcg gtgggcgtgg tggttataat gatttttcag 361 gtggcggcag tgccatgggc tccatgtgca atatggcgcc agcgcatagc acaaattcca 421 tcaatagtgg aggagatggt ggcggcggcg gcgatcccca gggcgtcaac ggtaccaatt 481 taattgtgaa ctatttgcct caagatatga cagatcgcga actatatgcg ctgtttagaa 541 cgtgtggtcc catcaacact tgtcgaatca tgaaagacta taagactggc tacagttttg 601 gttatgcttt tgttgatttt gcttccgaaa ttgatgccca aaatgcgatc aagactgtga 661 atggtattac agtgaggaat aaacgtataa aggtttcata tgcccgacct ggtggtgaat 721 caattaagga taccaattta tatgtcacca atttgccacg tacaatcacc gacgatgaac 781 tggagaagat ctttggcaaa tatggcagca ttgtacaaaa gaacatactc agagataaac 841 taaccggtag accgcgaggt gtagcatttg taagatttaa caaacgtgaa gaagcccaag 901 aggccatatc agctttaaat aatgttatac cggaaggtgc ctcccagcca ttaactgtac 961 gactggccga ggagcatggc aaaatgaaag ctcaccattt tatgaaccag ttgggtatgg 1021 gcccaccggc agcgcccata ccagcggctg ggccaggcta caacaacatg gtgcacagag 1081 cgtataacta ttctggactt ttggatggtt tttatcgcaa taaatcctat cactatccct 1141 atttataatt cagccatact ttagtgtaaa taatagttta aaaatatata aattacttag 1201 tattacatac tacatattta ataacttgta taatgcgctt aggtttaaat tgtataagga 1261 caactaattt ttaaaaataa cttaatttaa ttatttaagc tcatgcgtta tgtttaaaaa 1321 tttactatta tttttttatt attattaaaa ttttgaatag gaacaacaac aacaacaact 1381 aagaaagcat actttataaa agaaacttgt gtaaattaat atgatgcgac aattgtgttg 1441 ttttctacat gaaagactaa aatttgattt actagtatta caaaaaacaa aaaaactaaa 1501 acaaaaaaga tgtaagtata tttactcgat gtaaatccct acaccactgt gttatattat 1561 tttctgaact cattatgttg aattttcata gtttgtattt tgtttatagt tttaataaaa 1621 caaagactgg aattttttaa atttgttttt cttttctttt ctactattat ctttgttgtc 1681 ataaaggttt ttgtctgatt tgaaattttt gttaattttt tccattttcc cctcaagagt 1741 ggcataattt agatatatca acctaattct gtaagattca tgaagatgtc tgcaaacctt 1801 ctttaatctc catattgaca tttaagccct atggctaggc agggtatcgg gtaggttata 1861 ggttttactt tccctttgac ttgtgattat cacgcgaatg ggacgtaaaa ctacacaaaa 1921 atccgtcata agatttctga aataaaacca aaaaagtttt acaccgcaac aaattcgttt 1981 taacgcttag tatgcgtgat tgaaattgag ttgaagaatt caactcaaag ggcaggtctg 2041 tataacaatc atctattgta taaagatatg tgtcgaaatg aagtcaatct ggcatgactt 2101 agcgaaatcc cattctatga aaagccaaga taaaatagaa cagtaatggg cacactaaca 2161 tagttgaaaa aaataataaa ttgtgttttg tatggggggg cagttaatct tgaccaatca 2221 gccaagtgca aaaaaaaaaa caacaatgca atgtaaaata acaacaatgc gtcgagcgaa 2281 cgaaggcaca cgaactgctt acactatttg tgcgcttcta ttcgtttttt ctctgcctgc 2341 gtgcatagca atttatgtgc ggttatatgt tattgcccat ctatgaaaga gaatatcggt 2401 ttttagtaac aacagcaaaa tatttgctaa ggtagctcat accctttact tggccaaaat 2461 taagcgaaat gcgataaaga agtacgcaaa atgtatgttc aagaagtcta atcacaaatt 2521 gggtttatat ggcaggtaca tataagtaaa caaggatcga tataaaccac agttgatatg 2581 ggtttcgaga gattaaaata gatttattac aactaatgtc accaaaatcg tacaaatcaa 2641 taaaaagtaa agaaatgggc aaagccgaat gctagatttg cacaacgtgc aaaaatttaa 2701 ttatttaaag gcgccaatag cccgccttgc cataccgagt atcataggca ctcagtttta 2761 atgcaaagct agtcccgtcc ggtctctcac tgagtctctc cgctcaatac cgctgattgt 2821 ttgctactgc cgttgaagct actccgtatg gagcattcca ctatctgcaa cctgtgaatg 2881 ctccacgtag ctctcagcta agcttctcga gacaatgatg aacaccacac agataggatc 2941 tcaaagttcc agcctgtatg gtgctcacag ctatcccgtg ccggccctaa ttattctcca 3001 tttcatgcac ctaagtcggt tgaagtatgg tattgttacc atctaagtgc cgttgcctgt 3061 tagcagcaaa ggccgggcca gtatatagga aatgctccaa cgtcttatca tcttcccctc 3121 gtgccctaca tatgctatca cttgccgcac taatttggcg taagtgagct cgtagttcaa 3181 tgtgtcccgt tttgataccg aaagttatac tgatcccttt ttttacttcc tttcaataat 3241 agactcgtcc tcccacgatc cggatcttct cataggattt tcgtggtcct accgaacgct 3301 cgcatcgatt acgcccttga ctcggacttc gtcgagacgc tagaaaacca ttgatattcg 3361 ctccatgcga tagtttcgat attttccttc atagtatata ttcgatagta tcgacaaatt 3421 tgttaaatat gttatgaaat gttaaaagaa aacacgtaaa aacgtgtaaa ttcgacgagc 3481 tttgaatatc cactatgtac ctgtacaaca gctatactcg agctatattt gaaaaaagat 3541 tatattaaaa acgccttaca aatgtatgtt ctgagaactc taaacccggc tcttgggcct 3601 ttctgaccta atactgtcac acaaagttgg catttcccac ataggccctt aacccggtgg 3661 cgcacgggat ctcactgaga ctctccactc gataccactg attttctacg actgcaatta 3721 cagttactcc gtatggagca ttccactatc cgcaacctgt cgacgcaccc ggtagctcta 3781 aactgagctt ctcatgacaa caatgaacgc cacatagatc ggagcaaaaa gtgaacgcct 3841 gtgtggtgct catagctatc ccgtgccact catccatagg agtggcgaaa atatgaccgc 3901 ccgcggcgtc gctgtgccac ttggctacta cgacttaaag tgtcttacca atcaggaata 3961 tacatatatt ttttgtgggg tcttagacca atattacgag gtgtcacaaa tcgaatgaca 4021 aagttggtat acccccactc ctatggtgga gggtataaaa atgctgccag cattagtaag 4081 gtggtaaaag cagcaaacaa atttaattga tgttctcacc agtatttgaa cccaggcgtt 4141 ttatgttgta tccatattca taaattcaca aaatttcaaa tatctgtaca caactgtcaa 4201 aaaaaaaaaa gattctttag atagggttat ggcgttttcg ttcttattcg tcgaaaatgt 4261 gtgtatgcta catagtcgta catcggactt tccgacaggg catctctgct tataactatg 4321 actatgttat aacgggacca ggggccgttt tgaatcggca ttaaatagga ggtccctttt 4381 tgttgattct tttttccgga tggacggaaa tggctagttt gattaatatt tgcgatgtga 4441 tgcagtcaaa atgattttta tggaaatgtt taattgagat attctatctg tttgacaata 4501 tttagcaata cgagtataca aattagttgt tttattaaga cgctttctga ggagatgaag 4561 tagcgttcat cgaaactaat ctgtcaaccc tgctcgcaac aattcatagt ttgataagct 4621 atgaaatcgt ttaagacgaa cgaagactta aaaaagcttg actaataaac aatgttctta 4681 gcttgactaa tgactaacta aaaatacaac tatttttatt ggaaaacaat cagtgaactc 4741 attatgaact tcttctagat tattcattat gcatatgtta atgaataaaa ctattaaaaa 4801 acgaatgaat ataataataa tacttaattg ttaatttttt tcttacaaaa ttattattca 4861 atagattggt attaaaaaat agaaaatttt tatttaattt tatgcaaaga tttttatcta 4921 aaaaagttaa acatttaaat aaaatcttaa aaacactaca aaatgagaaa aacctaaatc 4981 agtttaaaaa gtacaaaaaa ataattaatc tttaaaccct aattttct