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LOCUS XM_013247696 4986 bp mRNA linear INV 02-SEP-2023 transcript variant X5, mRNA. ACCESSION XM_013247696 VERSION XM_013247696.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247696.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4986 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4986 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins" /db_xref="GeneID:106084176" CDS 102..1106 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X1" /protein_id="XP_013103150.1" /db_xref="GeneID:106084176" /translation="MYGQNIRNVAYNPYGYNGYRQSGERMWRMSHSLPSGMSRYAFSP QDTDFTSSYPGPSAMNPRGGRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGG GDPQGVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFA SEIDAQNAIKTVNGITVRNKRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG KYGSIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE EHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRAYNYSGLLDGFYRNKSYHYPYL " misc_feature 102..1037 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" ORIGIN 1 gtgtaatata tattttttta cttaatttcg tcttcaaaaa cggcatagtt gttagaagac 61 ttggattatc tagctgctgt tttatacttt tcgtttgaga catgtatggc caaaacattc 121 gaaatgttgc ttacaaccca tatggatata atggctacag acagagcggc gaacgtatgt 181 ggcgcatgtc gcactcactg ccctctggca tgtcacgtta tgcgttttca ccacaggaca 241 cagatttcac gtcatcgtat ccaggcccct cagctatgaa tccgcgcggt gggcgtggtg 301 gttataatga tttttcaggt ggcggcagtg ccatgggctc catgtgcaat atggcgccag 361 cgcatagcac aaattccatc aatagtggag gagatggtgg cggcggcggc gatccccagg 421 gcgtcaacgg taccaattta attgtgaact atttgcctca agatatgaca gatcgcgaac 481 tatatgcgct gtttagaacg tgtggtccca tcaacacttg tcgaatcatg aaagactata 541 agactggcta cagttttggt tatgcttttg ttgattttgc ttccgaaatt gatgcccaaa 601 atgcgatcaa gactgtgaat ggtattacag tgaggaataa acgtataaag gtttcatatg 661 cccgacctgg tggtgaatca attaaggata ccaatttata tgtcaccaat ttgccacgta 721 caatcaccga cgatgaactg gagaagatct ttggcaaata tggcagcatt gtacaaaaga 781 acatactcag agataaacta accggtagac cgcgaggtgt agcatttgta agatttaaca 841 aacgtgaaga agcccaagag gccatatcag ctttaaataa tgttataccg gaaggtgcct 901 cccagccatt aactgtacga ctggccgagg agcatggcaa aatgaaagct caccatttta 961 tgaaccagtt gggtatgggc ccaccggcag cgcccatacc agcggctggg ccaggctaca 1021 acaacatggt gcacagagcg tataactatt ctggactttt ggatggtttt tatcgcaata 1081 aatcctatca ctatccctat ttataattca gccatacttt agtgtaaata atagtttaaa 1141 aatatataaa ttacttagta ttacatacta catatttaat aacttgtata atgcgcttag 1201 gtttaaattg tataaggaca actaattttt aaaaataact taatttaatt atttaagctc 1261 atgcgttatg tttaaaaatt tactattatt tttttattat tattaaaatt ttgaatagga 1321 acaacaacaa caacaactaa gaaagcatac tttataaaag aaacttgtgt aaattaatat 1381 gatgcgacaa ttgtgttgtt ttctacatga aagactaaaa tttgatttac tagtattaca 1441 aaaaacaaaa aaactaaaac aaaaaagatg taagtatatt tactcgatgt aaatccctac 1501 accactgtgt tatattattt tctgaactca ttatgttgaa ttttcatagt ttgtattttg 1561 tttatagttt taataaaaca aagactggaa ttttttaaat ttgtttttct tttcttttct 1621 actattatct ttgttgtcat aaaggttttt gtctgatttg aaatttttgt taattttttc 1681 cattttcccc tcaagagtgg cataatttag atatatcaac ctaattctgt aagattcatg 1741 aagatgtctg caaaccttct ttaatctcca tattgacatt taagccctat ggctaggcag 1801 ggtatcgggt aggttatagg ttttactttc cctttgactt gtgattatca cgcgaatggg 1861 acgtaaaact acacaaaaat ccgtcataag atttctgaaa taaaaccaaa aaagttttac 1921 accgcaacaa attcgtttta acgcttagta tgcgtgattg aaattgagtt gaagaattca 1981 actcaaaggg caggtctgta taacaatcat ctattgtata aagatatgtg tcgaaatgaa 2041 gtcaatctgg catgacttag cgaaatccca ttctatgaaa agccaagata aaatagaaca 2101 gtaatgggca cactaacata gttgaaaaaa ataataaatt gtgttttgta tgggggggca 2161 gttaatcttg accaatcagc caagtgcaaa aaaaaaaaca acaatgcaat gtaaaataac 2221 aacaatgcgt cgagcgaacg aaggcacacg aactgcttac actatttgtg cgcttctatt 2281 cgttttttct ctgcctgcgt gcatagcaat ttatgtgcgg ttatatgtta ttgcccatct 2341 atgaaagaga atatcggttt ttagtaacaa cagcaaaata tttgctaagg tagctcatac 2401 cctttacttg gccaaaatta agcgaaatgc gataaagaag tacgcaaaat gtatgttcaa 2461 gaagtctaat cacaaattgg gtttatatgg caggtacata taagtaaaca aggatcgata 2521 taaaccacag ttgatatggg tttcgagaga ttaaaataga tttattacaa ctaatgtcac 2581 caaaatcgta caaatcaata aaaagtaaag aaatgggcaa agccgaatgc tagatttgca 2641 caacgtgcaa aaatttaatt atttaaaggc gccaatagcc cgccttgcca taccgagtat 2701 cataggcact cagttttaat gcaaagctag tcccgtccgg tctctcactg agtctctccg 2761 ctcaataccg ctgattgttt gctactgccg ttgaagctac tccgtatgga gcattccact 2821 atctgcaacc tgtgaatgct ccacgtagct ctcagctaag cttctcgaga caatgatgaa 2881 caccacacag ataggatctc aaagttccag cctgtatggt gctcacagct atcccgtgcc 2941 ggccctaatt attctccatt tcatgcacct aagtcggttg aagtatggta ttgttaccat 3001 ctaagtgccg ttgcctgtta gcagcaaagg ccgggccagt atataggaaa tgctccaacg 3061 tcttatcatc ttcccctcgt gccctacata tgctatcact tgccgcacta atttggcgta 3121 agtgagctcg tagttcaatg tgtcccgttt tgataccgaa agttatactg atcccttttt 3181 ttacttcctt tcaataatag actcgtcctc ccacgatccg gatcttctca taggattttc 3241 gtggtcctac cgaacgctcg catcgattac gcccttgact cggacttcgt cgagacgcta 3301 gaaaaccatt gatattcgct ccatgcgata gtttcgatat tttccttcat agtatatatt 3361 cgatagtatc gacaaatttg ttaaatatgt tatgaaatgt taaaagaaaa cacgtaaaaa 3421 cgtgtaaatt cgacgagctt tgaatatcca ctatgtacct gtacaacagc tatactcgag 3481 ctatatttga aaaaagatta tattaaaaac gccttacaaa tgtatgttct gagaactcta 3541 aacccggctc ttgggccttt ctgacctaat actgtcacac aaagttggca tttcccacat 3601 aggcccttaa cccggtggcg cacgggatct cactgagact ctccactcga taccactgat 3661 tttctacgac tgcaattaca gttactccgt atggagcatt ccactatccg caacctgtcg 3721 acgcacccgg tagctctaaa ctgagcttct catgacaaca atgaacgcca catagatcgg 3781 agcaaaaagt gaacgcctgt gtggtgctca tagctatccc gtgccactca tccataggag 3841 tggcgaaaat atgaccgccc gcggcgtcgc tgtgccactt ggctactacg acttaaagtg 3901 tcttaccaat caggaatata catatatttt ttgtggggtc ttagaccaat attacgaggt 3961 gtcacaaatc gaatgacaaa gttggtatac ccccactcct atggtggagg gtataaaaat 4021 gctgccagca ttagtaaggt ggtaaaagca gcaaacaaat ttaattgatg ttctcaccag 4081 tatttgaacc caggcgtttt atgttgtatc catattcata aattcacaaa atttcaaata 4141 tctgtacaca actgtcaaaa aaaaaaaaga ttctttagat agggttatgg cgttttcgtt 4201 cttattcgtc gaaaatgtgt gtatgctaca tagtcgtaca tcggactttc cgacagggca 4261 tctctgctta taactatgac tatgttataa cgggaccagg ggccgttttg aatcggcatt 4321 aaataggagg tccctttttg ttgattcttt tttccggatg gacggaaatg gctagtttga 4381 ttaatatttg cgatgtgatg cagtcaaaat gatttttatg gaaatgttta attgagatat 4441 tctatctgtt tgacaatatt tagcaatacg agtatacaaa ttagttgttt tattaagacg 4501 ctttctgagg agatgaagta gcgttcatcg aaactaatct gtcaaccctg ctcgcaacaa 4561 ttcatagttt gataagctat gaaatcgttt aagacgaacg aagacttaaa aaagcttgac 4621 taataaacaa tgttcttagc ttgactaatg actaactaaa aatacaacta tttttattgg 4681 aaaacaatca gtgaactcat tatgaacttc ttctagatta ttcattatgc atatgttaat 4741 gaataaaact attaaaaaac gaatgaatat aataataata cttaattgtt aatttttttc 4801 ttacaaaatt attattcaat agattggtat taaaaaatag aaaattttta tttaatttta 4861 tgcaaagatt tttatctaaa aaagttaaac atttaaataa aatcttaaaa acactacaaa 4921 atgagaaaaa cctaaatcag tttaaaaagt acaaaaaaat aattaatctt taaaccctaa 4981 ttttct