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LOCUS XM_013247695 5018 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013247695 VERSION XM_013247695.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247695.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5018 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5018 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins" /db_xref="GeneID:106084176" CDS 134..1138 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X1" /protein_id="XP_013103149.1" /db_xref="GeneID:106084176" /translation="MYGQNIRNVAYNPYGYNGYRQSGERMWRMSHSLPSGMSRYAFSP QDTDFTSSYPGPSAMNPRGGRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGG GDPQGVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFA SEIDAQNAIKTVNGITVRNKRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG KYGSIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE EHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRAYNYSGLLDGFYRNKSYHYPYL " misc_feature 134..1069 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" ORIGIN 1 gtaatcgatt aggaattcag tttgcttcct cccgcttgcg atttgtattt tattttttcg 61 cttggcacgc gctgtgtgta ttccgtgatt ccggatcccg tggatcgtct tttttatact 121 tttcgtttga gacatgtatg gccaaaacat tcgaaatgtt gcttacaacc catatggata 181 taatggctac agacagagcg gcgaacgtat gtggcgcatg tcgcactcac tgccctctgg 241 catgtcacgt tatgcgtttt caccacagga cacagatttc acgtcatcgt atccaggccc 301 ctcagctatg aatccgcgcg gtgggcgtgg tggttataat gatttttcag gtggcggcag 361 tgccatgggc tccatgtgca atatggcgcc agcgcatagc acaaattcca tcaatagtgg 421 aggagatggt ggcggcggcg gcgatcccca gggcgtcaac ggtaccaatt taattgtgaa 481 ctatttgcct caagatatga cagatcgcga actatatgcg ctgtttagaa cgtgtggtcc 541 catcaacact tgtcgaatca tgaaagacta taagactggc tacagttttg gttatgcttt 601 tgttgatttt gcttccgaaa ttgatgccca aaatgcgatc aagactgtga atggtattac 661 agtgaggaat aaacgtataa aggtttcata tgcccgacct ggtggtgaat caattaagga 721 taccaattta tatgtcacca atttgccacg tacaatcacc gacgatgaac tggagaagat 781 ctttggcaaa tatggcagca ttgtacaaaa gaacatactc agagataaac taaccggtag 841 accgcgaggt gtagcatttg taagatttaa caaacgtgaa gaagcccaag aggccatatc 901 agctttaaat aatgttatac cggaaggtgc ctcccagcca ttaactgtac gactggccga 961 ggagcatggc aaaatgaaag ctcaccattt tatgaaccag ttgggtatgg gcccaccggc 1021 agcgcccata ccagcggctg ggccaggcta caacaacatg gtgcacagag cgtataacta 1081 ttctggactt ttggatggtt tttatcgcaa taaatcctat cactatccct atttataatt 1141 cagccatact ttagtgtaaa taatagttta aaaatatata aattacttag tattacatac 1201 tacatattta ataacttgta taatgcgctt aggtttaaat tgtataagga caactaattt 1261 ttaaaaataa cttaatttaa ttatttaagc tcatgcgtta tgtttaaaaa tttactatta 1321 tttttttatt attattaaaa ttttgaatag gaacaacaac aacaacaact aagaaagcat 1381 actttataaa agaaacttgt gtaaattaat atgatgcgac aattgtgttg ttttctacat 1441 gaaagactaa aatttgattt actagtatta caaaaaacaa aaaaactaaa acaaaaaaga 1501 tgtaagtata tttactcgat gtaaatccct acaccactgt gttatattat tttctgaact 1561 cattatgttg aattttcata gtttgtattt tgtttatagt tttaataaaa caaagactgg 1621 aattttttaa atttgttttt cttttctttt ctactattat ctttgttgtc ataaaggttt 1681 ttgtctgatt tgaaattttt gttaattttt tccattttcc cctcaagagt ggcataattt 1741 agatatatca acctaattct gtaagattca tgaagatgtc tgcaaacctt ctttaatctc 1801 catattgaca tttaagccct atggctaggc agggtatcgg gtaggttata ggttttactt 1861 tccctttgac ttgtgattat cacgcgaatg ggacgtaaaa ctacacaaaa atccgtcata 1921 agatttctga aataaaacca aaaaagtttt acaccgcaac aaattcgttt taacgcttag 1981 tatgcgtgat tgaaattgag ttgaagaatt caactcaaag ggcaggtctg tataacaatc 2041 atctattgta taaagatatg tgtcgaaatg aagtcaatct ggcatgactt agcgaaatcc 2101 cattctatga aaagccaaga taaaatagaa cagtaatggg cacactaaca tagttgaaaa 2161 aaataataaa ttgtgttttg tatggggggg cagttaatct tgaccaatca gccaagtgca 2221 aaaaaaaaaa caacaatgca atgtaaaata acaacaatgc gtcgagcgaa cgaaggcaca 2281 cgaactgctt acactatttg tgcgcttcta ttcgtttttt ctctgcctgc gtgcatagca 2341 atttatgtgc ggttatatgt tattgcccat ctatgaaaga gaatatcggt ttttagtaac 2401 aacagcaaaa tatttgctaa ggtagctcat accctttact tggccaaaat taagcgaaat 2461 gcgataaaga agtacgcaaa atgtatgttc aagaagtcta atcacaaatt gggtttatat 2521 ggcaggtaca tataagtaaa caaggatcga tataaaccac agttgatatg ggtttcgaga 2581 gattaaaata gatttattac aactaatgtc accaaaatcg tacaaatcaa taaaaagtaa 2641 agaaatgggc aaagccgaat gctagatttg cacaacgtgc aaaaatttaa ttatttaaag 2701 gcgccaatag cccgccttgc cataccgagt atcataggca ctcagtttta atgcaaagct 2761 agtcccgtcc ggtctctcac tgagtctctc cgctcaatac cgctgattgt ttgctactgc 2821 cgttgaagct actccgtatg gagcattcca ctatctgcaa cctgtgaatg ctccacgtag 2881 ctctcagcta agcttctcga gacaatgatg aacaccacac agataggatc tcaaagttcc 2941 agcctgtatg gtgctcacag ctatcccgtg ccggccctaa ttattctcca tttcatgcac 3001 ctaagtcggt tgaagtatgg tattgttacc atctaagtgc cgttgcctgt tagcagcaaa 3061 ggccgggcca gtatatagga aatgctccaa cgtcttatca tcttcccctc gtgccctaca 3121 tatgctatca cttgccgcac taatttggcg taagtgagct cgtagttcaa tgtgtcccgt 3181 tttgataccg aaagttatac tgatcccttt ttttacttcc tttcaataat agactcgtcc 3241 tcccacgatc cggatcttct cataggattt tcgtggtcct accgaacgct cgcatcgatt 3301 acgcccttga ctcggacttc gtcgagacgc tagaaaacca ttgatattcg ctccatgcga 3361 tagtttcgat attttccttc atagtatata ttcgatagta tcgacaaatt tgttaaatat 3421 gttatgaaat gttaaaagaa aacacgtaaa aacgtgtaaa ttcgacgagc tttgaatatc 3481 cactatgtac ctgtacaaca gctatactcg agctatattt gaaaaaagat tatattaaaa 3541 acgccttaca aatgtatgtt ctgagaactc taaacccggc tcttgggcct ttctgaccta 3601 atactgtcac acaaagttgg catttcccac ataggccctt aacccggtgg cgcacgggat 3661 ctcactgaga ctctccactc gataccactg attttctacg actgcaatta cagttactcc 3721 gtatggagca ttccactatc cgcaacctgt cgacgcaccc ggtagctcta aactgagctt 3781 ctcatgacaa caatgaacgc cacatagatc ggagcaaaaa gtgaacgcct gtgtggtgct 3841 catagctatc ccgtgccact catccatagg agtggcgaaa atatgaccgc ccgcggcgtc 3901 gctgtgccac ttggctacta cgacttaaag tgtcttacca atcaggaata tacatatatt 3961 ttttgtgggg tcttagacca atattacgag gtgtcacaaa tcgaatgaca aagttggtat 4021 acccccactc ctatggtgga gggtataaaa atgctgccag cattagtaag gtggtaaaag 4081 cagcaaacaa atttaattga tgttctcacc agtatttgaa cccaggcgtt ttatgttgta 4141 tccatattca taaattcaca aaatttcaaa tatctgtaca caactgtcaa aaaaaaaaaa 4201 gattctttag atagggttat ggcgttttcg ttcttattcg tcgaaaatgt gtgtatgcta 4261 catagtcgta catcggactt tccgacaggg catctctgct tataactatg actatgttat 4321 aacgggacca ggggccgttt tgaatcggca ttaaatagga ggtccctttt tgttgattct 4381 tttttccgga tggacggaaa tggctagttt gattaatatt tgcgatgtga tgcagtcaaa 4441 atgattttta tggaaatgtt taattgagat attctatctg tttgacaata tttagcaata 4501 cgagtataca aattagttgt tttattaaga cgctttctga ggagatgaag tagcgttcat 4561 cgaaactaat ctgtcaaccc tgctcgcaac aattcatagt ttgataagct atgaaatcgt 4621 ttaagacgaa cgaagactta aaaaagcttg actaataaac aatgttctta gcttgactaa 4681 tgactaacta aaaatacaac tatttttatt ggaaaacaat cagtgaactc attatgaact 4741 tcttctagat tattcattat gcatatgtta atgaataaaa ctattaaaaa acgaatgaat 4801 ataataataa tacttaattg ttaatttttt tcttacaaaa ttattattca atagattggt 4861 attaaaaaat agaaaatttt tatttaattt tatgcaaaga tttttatcta aaaaagttaa 4921 acatttaaat aaaatcttaa aaacactaca aaatgagaaa aacctaaatc agtttaaaaa 4981 gtacaaaaaa ataattaatc tttaaaccct aattttct