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LOCUS XM_013247694 5022 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013247694 VERSION XM_013247694.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247694.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5022 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5022 /gene="LOC106084176" /note="sex-lethal homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins" /db_xref="GeneID:106084176" CDS 138..1142 /gene="LOC106084176" /codon_start=1 /product="sex-lethal homolog isoform X1" /protein_id="XP_013103148.1" /db_xref="GeneID:106084176" /translation="MYGQNIRNVAYNPYGYNGYRQSGERMWRMSHSLPSGMSRYAFSP QDTDFTSSYPGPSAMNPRGGRGGYNDFSGGGSAMGSMCNMAPAHSTNSINSGGDGGGG GDPQGVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFA SEIDAQNAIKTVNGITVRNKRIKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG KYGSIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE EHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRAYNYSGLLDGFYRNKSYHYPYL " misc_feature 138..1073 /gene="LOC106084176" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" ORIGIN 1 gtaatcgatt aggaattcag tttgcttcct cccgcttgcg atttgtattt tattttttcg 61 cttggcacgc gctgtgtgta ttccgtgatt ccggatcccg tggatcgtct tgtgttttta 121 tacttttcgt ttgagacatg tatggccaaa acattcgaaa tgttgcttac aacccatatg 181 gatataatgg ctacagacag agcggcgaac gtatgtggcg catgtcgcac tcactgccct 241 ctggcatgtc acgttatgcg ttttcaccac aggacacaga tttcacgtca tcgtatccag 301 gcccctcagc tatgaatccg cgcggtgggc gtggtggtta taatgatttt tcaggtggcg 361 gcagtgccat gggctccatg tgcaatatgg cgccagcgca tagcacaaat tccatcaata 421 gtggaggaga tggtggcggc ggcggcgatc cccagggcgt caacggtacc aatttaattg 481 tgaactattt gcctcaagat atgacagatc gcgaactata tgcgctgttt agaacgtgtg 541 gtcccatcaa cacttgtcga atcatgaaag actataagac tggctacagt tttggttatg 601 cttttgttga ttttgcttcc gaaattgatg cccaaaatgc gatcaagact gtgaatggta 661 ttacagtgag gaataaacgt ataaaggttt catatgcccg acctggtggt gaatcaatta 721 aggataccaa tttatatgtc accaatttgc cacgtacaat caccgacgat gaactggaga 781 agatctttgg caaatatggc agcattgtac aaaagaacat actcagagat aaactaaccg 841 gtagaccgcg aggtgtagca tttgtaagat ttaacaaacg tgaagaagcc caagaggcca 901 tatcagcttt aaataatgtt ataccggaag gtgcctccca gccattaact gtacgactgg 961 ccgaggagca tggcaaaatg aaagctcacc attttatgaa ccagttgggt atgggcccac 1021 cggcagcgcc cataccagcg gctgggccag gctacaacaa catggtgcac agagcgtata 1081 actattctgg acttttggat ggtttttatc gcaataaatc ctatcactat ccctatttat 1141 aattcagcca tactttagtg taaataatag tttaaaaata tataaattac ttagtattac 1201 atactacata tttaataact tgtataatgc gcttaggttt aaattgtata aggacaacta 1261 atttttaaaa ataacttaat ttaattattt aagctcatgc gttatgttta aaaatttact 1321 attatttttt tattattatt aaaattttga ataggaacaa caacaacaac aactaagaaa 1381 gcatacttta taaaagaaac ttgtgtaaat taatatgatg cgacaattgt gttgttttct 1441 acatgaaaga ctaaaatttg atttactagt attacaaaaa acaaaaaaac taaaacaaaa 1501 aagatgtaag tatatttact cgatgtaaat ccctacacca ctgtgttata ttattttctg 1561 aactcattat gttgaatttt catagtttgt attttgttta tagttttaat aaaacaaaga 1621 ctggaatttt ttaaatttgt ttttcttttc ttttctacta ttatctttgt tgtcataaag 1681 gtttttgtct gatttgaaat ttttgttaat tttttccatt ttcccctcaa gagtggcata 1741 atttagatat atcaacctaa ttctgtaaga ttcatgaaga tgtctgcaaa ccttctttaa 1801 tctccatatt gacatttaag ccctatggct aggcagggta tcgggtaggt tataggtttt 1861 actttccctt tgacttgtga ttatcacgcg aatgggacgt aaaactacac aaaaatccgt 1921 cataagattt ctgaaataaa accaaaaaag ttttacaccg caacaaattc gttttaacgc 1981 ttagtatgcg tgattgaaat tgagttgaag aattcaactc aaagggcagg tctgtataac 2041 aatcatctat tgtataaaga tatgtgtcga aatgaagtca atctggcatg acttagcgaa 2101 atcccattct atgaaaagcc aagataaaat agaacagtaa tgggcacact aacatagttg 2161 aaaaaaataa taaattgtgt tttgtatggg ggggcagtta atcttgacca atcagccaag 2221 tgcaaaaaaa aaaacaacaa tgcaatgtaa aataacaaca atgcgtcgag cgaacgaagg 2281 cacacgaact gcttacacta tttgtgcgct tctattcgtt ttttctctgc ctgcgtgcat 2341 agcaatttat gtgcggttat atgttattgc ccatctatga aagagaatat cggtttttag 2401 taacaacagc aaaatatttg ctaaggtagc tcataccctt tacttggcca aaattaagcg 2461 aaatgcgata aagaagtacg caaaatgtat gttcaagaag tctaatcaca aattgggttt 2521 atatggcagg tacatataag taaacaagga tcgatataaa ccacagttga tatgggtttc 2581 gagagattaa aatagattta ttacaactaa tgtcaccaaa atcgtacaaa tcaataaaaa 2641 gtaaagaaat gggcaaagcc gaatgctaga tttgcacaac gtgcaaaaat ttaattattt 2701 aaaggcgcca atagcccgcc ttgccatacc gagtatcata ggcactcagt tttaatgcaa 2761 agctagtccc gtccggtctc tcactgagtc tctccgctca ataccgctga ttgtttgcta 2821 ctgccgttga agctactccg tatggagcat tccactatct gcaacctgtg aatgctccac 2881 gtagctctca gctaagcttc tcgagacaat gatgaacacc acacagatag gatctcaaag 2941 ttccagcctg tatggtgctc acagctatcc cgtgccggcc ctaattattc tccatttcat 3001 gcacctaagt cggttgaagt atggtattgt taccatctaa gtgccgttgc ctgttagcag 3061 caaaggccgg gccagtatat aggaaatgct ccaacgtctt atcatcttcc cctcgtgccc 3121 tacatatgct atcacttgcc gcactaattt ggcgtaagtg agctcgtagt tcaatgtgtc 3181 ccgttttgat accgaaagtt atactgatcc ctttttttac ttcctttcaa taatagactc 3241 gtcctcccac gatccggatc ttctcatagg attttcgtgg tcctaccgaa cgctcgcatc 3301 gattacgccc ttgactcgga cttcgtcgag acgctagaaa accattgata ttcgctccat 3361 gcgatagttt cgatattttc cttcatagta tatattcgat agtatcgaca aatttgttaa 3421 atatgttatg aaatgttaaa agaaaacacg taaaaacgtg taaattcgac gagctttgaa 3481 tatccactat gtacctgtac aacagctata ctcgagctat atttgaaaaa agattatatt 3541 aaaaacgcct tacaaatgta tgttctgaga actctaaacc cggctcttgg gcctttctga 3601 cctaatactg tcacacaaag ttggcatttc ccacataggc ccttaacccg gtggcgcacg 3661 ggatctcact gagactctcc actcgatacc actgattttc tacgactgca attacagtta 3721 ctccgtatgg agcattccac tatccgcaac ctgtcgacgc acccggtagc tctaaactga 3781 gcttctcatg acaacaatga acgccacata gatcggagca aaaagtgaac gcctgtgtgg 3841 tgctcatagc tatcccgtgc cactcatcca taggagtggc gaaaatatga ccgcccgcgg 3901 cgtcgctgtg ccacttggct actacgactt aaagtgtctt accaatcagg aatatacata 3961 tattttttgt ggggtcttag accaatatta cgaggtgtca caaatcgaat gacaaagttg 4021 gtataccccc actcctatgg tggagggtat aaaaatgctg ccagcattag taaggtggta 4081 aaagcagcaa acaaatttaa ttgatgttct caccagtatt tgaacccagg cgttttatgt 4141 tgtatccata ttcataaatt cacaaaattt caaatatctg tacacaactg tcaaaaaaaa 4201 aaaagattct ttagataggg ttatggcgtt ttcgttctta ttcgtcgaaa atgtgtgtat 4261 gctacatagt cgtacatcgg actttccgac agggcatctc tgcttataac tatgactatg 4321 ttataacggg accaggggcc gttttgaatc ggcattaaat aggaggtccc tttttgttga 4381 ttcttttttc cggatggacg gaaatggcta gtttgattaa tatttgcgat gtgatgcagt 4441 caaaatgatt tttatggaaa tgtttaattg agatattcta tctgtttgac aatatttagc 4501 aatacgagta tacaaattag ttgttttatt aagacgcttt ctgaggagat gaagtagcgt 4561 tcatcgaaac taatctgtca accctgctcg caacaattca tagtttgata agctatgaaa 4621 tcgtttaaga cgaacgaaga cttaaaaaag cttgactaat aaacaatgtt cttagcttga 4681 ctaatgacta actaaaaata caactatttt tattggaaaa caatcagtga actcattatg 4741 aacttcttct agattattca ttatgcatat gttaatgaat aaaactatta aaaaacgaat 4801 gaatataata ataatactta attgttaatt tttttcttac aaaattatta ttcaatagat 4861 tggtattaaa aaatagaaaa tttttattta attttatgca aagattttta tctaaaaaag 4921 ttaaacattt aaataaaatc ttaaaaacac tacaaaatga gaaaaaccta aatcagttta 4981 aaaagtacaa aaaaataatt aatctttaaa ccctaatttt ct