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LOCUS XM_013247691 3305 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013247691 VERSION XM_013247691.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247691.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3305 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3305 /gene="LOC106084175" /note="proteoglycan 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106084175" CDS 1441..2739 /gene="LOC106084175" /codon_start=1 /product="uncharacterized protein LOC106084175 isoform X1" /protein_id="XP_013103145.2" /db_xref="GeneID:106084175" /translation="MADLSHELGALRFVVDSPLSSKVAMFNNQVSAHKQSQLLNPFAQ TDGRSSPKPSFSKDEYGKPLAGSLTEMRGQKANIHVLKEMLELCQIIDSEGYNVKDEP EMRVIPFGELFNIYNYISDKVVGILLRARKHKLVEFEGEMLFQRRDDDVPIFLLKPIA EIRREMNDKIESIKRCGSPAPQATSVLLDKKAHGLDVPKGGTPRASVSRTPTPQSSKA SSPARDPNKTGSTPQSSKAPSPARDASKTGSTSHSTKAPSPAPVASNGAPKPETPKIQ ISRDPEQVNEPPPEDSNNASTEPIKAEEIANTPAAPEQVPKQSEVPETQSEATTPQIQ EPKVEEKPTEDQPAATTVTETVAVTEAGVAAVTITEDKSDLNNNPAESSVMPVVVIEA SAVYVRSNNNEAASPDTATTETEPTPVNEPAAATESAPFA" polyA_site 3305 /gene="LOC106084175" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcccggttat caagcggccc agaagtggtt tcttatacca caccgaaaaa taaaacaaaa 61 acaaaatata aacaccacac atagaaacaa atgcaaacaa aaattactcc ttgtacgtag 121 tcgtgaacgc aactgcaccc acagtggcca acaagtattg ctcaggaaag ttttttggcg 181 acaaaagaaa gaaagcacac agaacaacac aacacgtgaa tataaagtaa ttaaacaaac 241 gagagcccac aaataaatag acaagaaaaa caagaacgaa aaaaaataaa taaataaacg 301 atcaaaaaga agaaaaagga attgttctcg tggaattttt gtgaatgaat gaatctggtt 361 aagaagtcga catacataca tagagcaaag ccagtacata ctgacataag tgtccgtcgt 421 cgtcgcttgt ttagtatata tatatatatg ggaataggca agccagcata tagaaaattg 481 actaaatata cattcgcaca tactacgtag agtatcaatt ctggccactg ctgccgctgc 541 tgctaagtat gaaaatctga aaaacatact tattaataaa agccatataa aacttttgaa 601 aaggcatcat ttgctgaacg ctcgtcaaag tgaaaagata ttaatcttaa gaagaaaaaa 661 aaatataata aagaaacccc ccgaagaaaa aattcaaaca actcaaagac aataaataaa 721 taaatctatt ttccctcaaa taaaacgcca aattgcaaag caacaacaac aacaacaaga 781 gaaataacag ccatcaacac caatcaccaa gaaagtgcaa aacaaccaac caacctagtg 841 ctccacctcc tcctccttct cgacgaataa agaaagcact atttagccac tattcaagca 901 tcgcatatta tttgaaagtg atataatttt ggtgcttttc tgttttcggc aaaatagaaa 961 taaaactaaa caaagaaaaa accaaggcat tgtgtacgga cggtgtagtc ggtttcaaat 1021 tataacggtt atttttgatt gctgttaacg actcttttcc gtttcattgt tacgcagcag 1081 caacagtgtt acatttggcc gttagtcact cataatcgtt gcgcacatgt gcccctttcc 1141 agtggagtgt tattaaaatc aagatttaca aagacttaaa aacaacaaca tcatcagtca 1201 cttgaagagc ggtcactcac ttactcgctc tttattgccc tgatctaaaa aacaaaaacc 1261 taccaaattg catttattaa gaaatcaaaa aaacaccaaa agctaagaaa aatccattaa 1321 gctcaaccag aaatagagaa aaacaaaaaa ccaaaacata aatatataca ttgtgttata 1381 tccacaactt gttaactttc tcaaatcgat ttgtttgtaa gccacaccaa atcattaaca 1441 atggcggatc tatcacacga attgggagca ctgcgcttcg ttgtggattc acctttatct 1501 tcgaaagtag ctatgttcaa taatcaagtg agtgcccata agcagtctca actcttaaat 1561 cccttcgccc aaacggatgg aaggtcttcc cctaagccca gtttttccaa agatgaatat 1621 ggcaaaccct tggcaggaag tttgactgag atgagaggac aaaaggctaa cattcatgtg 1681 ctcaaagaaa tgttagagct ctgtcagata atcgactcgg agggctacaa tgtcaaggac 1741 gagccagaaa tgcgtgtcat tccctttgga gagttattca atatttacaa ttacatttcc 1801 gacaaagttg tgggtatttt gcttagagcc cgtaaacaca aactggtcga atttgaaggt 1861 gaaatgctat ttcaaagacg cgatgacgat gtccccatat ttttgctgaa gccgatagcc 1921 gagatacgtc gtgaaatgaa cgacaagatt gagagcatca aaagatgtgg cagtccagca 1981 ccgcaagcta cctcagtgtt attggataaa aaagctcatg gtttggatgt acccaaaggc 2041 ggcactcctc gcgcatcagt ctcgcgtaca cctacacctc agtcatcaaa agcgtcttct 2101 ccagcgcgtg accccaacaa aaccggctcg actccccaat catctaaagc cccctctcca 2161 gctcgggatg ccagcaaaac gggctcaact tcccactcca ctaaagctcc ttctcctgct 2221 ccagttgcta gcaatggagc acccaaacca gaaacaccaa aaattcaaat tagcagagat 2281 ccagagcaag ttaacgagcc cccaccggag gatagtaata acgcaagcac agagccaatc 2341 aaagcagagg aaattgctaa tacgcctgca gcacccgagc aagtcccaaa acaaagtgaa 2401 gttcctgaaa cacaatccga agcaacaaca ccacaaatac aagagcccaa agtggaggag 2461 aagccaactg aagatcaacc cgcggccaca acagtaacag aaacagtagc tgtaacggaa 2521 gctggtgttg ccgccgtaac aataaccgaa gacaaaagtg atcttaacaa caatccagcc 2581 gaatcatccg tcatgcccgt tgtggtcatc gaagccagtg ccgtctatgt gaggtctaac 2641 aataatgaag ctgcttcccc ggataccgcc acaactgaaa ctgagccaac accagtgaat 2701 gaaccagctg cagcaactga atcagcgccc tttgcctaaa tacaccccac cttagttata 2761 gtttccccat ctcaatgaac ctcgtccaaa agtacattag tccttaagtt aattattgtc 2821 ctttcgtagt accccaagtg tacagaaaga cacaaaaact atgcaaccct cctattgacg 2881 gaccaggcta actcgctcat caagaattgc gagccatttc tgtgggccaa ggttcccgac 2941 attatgtcat agctcccagg gtgcagtatt ataaaatggt gtaaatagtg ataccgagta 3001 attaagtaaa catgtaatcg aattagtcca tctaatcgcc ccgccaatac tcccgctcct 3061 ccccccaacc tctcatccat cctctgttca agctaaaact gttattatta aatgtttcat 3121 ttcaatcaat catataaaca cgtgtaactg catagatata gatactaaac tactactact 3181 actactccaa ctacaactat tacatatttt aaaacaacat atttatatag acatacctac 3241 acacatacat aattcatagt gatattattt cagaggaaaa taaattattc aatgtaaact 3301 ctaaa