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PREDICTED: Stomoxys calcitrans probable tRNA N6-adenosine


LOCUS       XM_013247651            1306 bp    mRNA    linear   INV 02-SEP-2023
            threonylcarbamoyltransferase, mitochondrial (LOC106084148),
            transcript variant X2, mRNA.
ACCESSION   XM_013247651
VERSION     XM_013247651.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013247651.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1306
                     /gene="LOC106084148"
                     /note="probable tRNA N6-adenosine
                     threonylcarbamoyltransferase, mitochondrial; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:106084148"
     CDS             58..1296
                     /gene="LOC106084148"
                     /codon_start=1
                     /product="probable tRNA N6-adenosine
                     threonylcarbamoyltransferase, mitochondrial isoform X2"
                     /protein_id="XP_013103105.2"
                     /db_xref="GeneID:106084148"
                     /translation="MFNCNKLQRFYPLEVCRKLSAVLKCRSLTVMGIETSCDDTGIAI
                     IKREADNNKVLANVLNSQQSFHIRYGGIIPPRAQDLHRSKIAAVYERCLEEANIKPNE
                     INAIAVTTRPGLPLSLMVGLRFARYIARCNNKPLLPVHHMKAHALQARMEHDIPFPFL
                     CLLISGGHSQLCFVQDANKFLLLGESLDDAPGEAFDKIVRRLRLYINPQFQKWSGGQI
                     VDNAAKLAQNPEAFEFPLPLARMRDCNFSFAGIKNNSFRAIKRQEMKEGCPPDSVISN
                     YADFCAGLLNAVSRHLMNRTQRAIEFCIEHKLFASNIPKSLVVSGGVANNDVIFQDIA
                     HLAAQYECQTFRPSKKYCSDNGVMIAWNGIEQMMHNTQSTRYDYYNIDIQGKATLGES
                     LIQQVTEANIKCKWIKPSRS"
     polyA_site      1306
                     /gene="LOC106084148"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttaacaaac gccagaaaat actattatta atttcaaaat cctttaatat aaatgaaatg
       61 tttaattgta ataagttgca acgcttttac cccttagagg tgtgcagaaa actgtctgca
      121 gttttaaaat gtcgttcttt gactgtgatg ggaattgaga cttcgtgtga tgataccggc
      181 attgcgatta taaaacgtga agcagacaat aacaaggttt tggcaaatgt tttaaattca
      241 cagcaaagtt ttcatataag atatggtggc ataataccgc ctcgtgctca agacttacat
      301 agatccaaaa ttgctgccgt atacgaacgt tgcttggagg aggcaaatat taaacccaac
      361 gaaataaatg caattgctgt tactaccaga ccaggtctac ctctcagtct tatggtgggt
      421 ttacgttttg ctcgctatat agctcgttgc aataacaaac ctttactgcc agttcatcac
      481 atgaaagctc atgccttgca agctcgcatg gaacatgata tcccatttcc atttttgtgt
      541 ctccttataa gcggaggcca ttcgcaattg tgcttcgttc aagatgctaa caaatttctt
      601 ttgctggggg aaagtctgga tgatgctcca ggcgaagcat ttgataaaat agttcgacgc
      661 ctgcgtctat atattaatcc acaatttcag aaatggagtg gtggtcagat tgtggacaat
      721 gccgccaaat tggcacaaaa cccagaagca tttgaatttc ctttacctct ggcacgtatg
      781 cgagattgca attttagttt tgctggcatc aaaaataatt catttcgagc catcaaaaga
      841 caagaaatga aagaaggctg tcccccagat tctgttatca gcaattatgc agatttttgc
      901 gctggcctat taaatgctgt ttcccgccac cttatgaatc gcactcaaag agccattgaa
      961 ttttgcatag aacataagtt attcgcctca aacataccaa aatctttggt ggtatccgga
     1021 ggtgtggcaa ataatgatgt tatatttcaa gacatcgccc atttagccgc tcaatatgaa
     1081 tgccaaacgt ttaggccatc gaaaaaatat tgctctgata acggggttat gattgcctgg
     1141 aacggcatag aacaaatgat gcacaataca caaagtacaa ggtatgatta ttataatatt
     1201 gatatacagg gcaaggccac tttgggcgaa tccctaattc agcaggtgac agaagctaat
     1261 attaaatgca agtggataaa accatcaaga agttgatata agcgta