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LOCUS XM_013247646 2939 bp mRNA linear INV 02-SEP-2023 protein 11 homolog (LOC106084142), mRNA. ACCESSION XM_013247646 VERSION XM_013247646.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247646.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2939 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2939 /gene="LOC106084142" /note="vacuolar protein sorting-associated protein 11 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106084142" CDS 138..2867 /gene="LOC106084142" /codon_start=1 /product="vacuolar protein sorting-associated protein 11 homolog" /protein_id="XP_013103100.2" /db_xref="GeneID:106084142" /translation="MGVLEWKMCNFFKLEALNVNSKYANIKDTITSNCSNMQYKVFCN NNGYVYVFLGDWECISFQASNSAINFCTITDESDLLVIHDEGSATEKLLKIYSVSKLL KRRPTVPVSCATLGRHCKVTTLKSYYLENQLYLAVGLEKGHILLYKSTISRDITGSAK TLQVCGKPIKGIEFLQKDRGDLNMFVCSDAGVFCYSLISASGNHTEHKIILDDEMEAV SCCALKPRREPNDEQYFVVGKQDAVYCYTIEGKGPCFALKCSKQIVRWFGKHLIVVKS KISVNNTKRSQLVIINIENSMMVLNEELFEIECIFPTPDYENCIIFTKDGAIYTLRDQ EIRYKLQMLYSKNLYDIALKLIEGQATYSDLVANVFVNYGDHLLQRGDIEESVKMYVK TIGQVPPFRVISKLLNFRYNEHLIQYLRKLVKSGVAPQEYSDLLNNCDKRLELPGSIN KIFRNGECPFDLDSIEPMGQEKDITKYFLEKSEKGLELFSENGHWIVSNYPFDVGDIV NRILSNGLTSAHQPIDLFIRVMLPLLLSNKECVLNVLSSLDFDYRKNPNINLIWAEIL LQKWKKFSGEEINALADAIKENDFNMSMNDIFIICRTHQYLPGIKMMYESFGLNALNF NSFLKCCFTLPLDTSAIDLDTNKYSLMWMQTLSKDNLQSAQSSAFVKYILSKTLHSNS HYTLTILQKISANTNFNLSHLNKALPKDIFLKQFAFDNFRDIAATDNKLKQIKRLLTD YQQKPMEFRNSKCDICKQPLKHPSIYYLCQHSYHKECLSSYSEITGCLACAAISQKDF ERRNSEVIPFNKAEDASSTLKNISHKLAVGVFAQGPIYRSNKSSLSTVVTHIPLANSI SSGHDMYRSKTVEQPAKSTNPFEESTNPFDDEEDDSNQYDSNLNPFEQGKRLN" polyA_site 2939 /gene="LOC106084142" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacagaattt aattgacatt ttaacacaaa caaagcaatt tactgttttt cactggtagc 61 cagtttttgg aatataagtt atccgcaata cctttaaata atacataaaa tagagcaatc 121 tagcattaat catcaaaatg ggggtcctcg aatggaagat gtgtaacttc ttcaagttgg 181 aggcgttgaa cgtcaacagc aaatatgcca atattaagga cacaataact tcaaactgca 241 gcaatatgca atataaagta ttttgcaata ataatggtta tgtttatgtc ttcttaggag 301 attgggagtg tatctcattt caagcatcaa acagtgccat taacttctgc accattacgg 361 atgagtcaga tttgctggtc attcacgacg aaggctccgc gacggaaaag ctgcttaaga 421 tatacagtgt gtccaagtta ctaaaacggc gaccaacagt accagtgagt tgtgccacgc 481 tgggacgtca ttgcaaagtt accacattaa aatcatatta cctagagaat cagttgtatt 541 tagctgttgg tttggagaaa ggtcacattc tcttgtacaa gtctacaata tcgagagaca 601 taactggttc ggcaaaaact ttgcaagttt gtggaaaacc aataaaaggc atcgaatttc 661 ttcagaaaga ccgtggagat cttaatatgt ttgtatgctc ggacgccgga gtgttctgtt 721 acagtctcat atcggcaagt ggcaatcaca cggagcacaa aattattctt gacgatgaaa 781 tggaggcggt cagctgctgt gcactgaagc cccgccgaga gcccaacgat gaacagtact 841 ttgttgtggg taaacaagat gccgtctatt gttatacgat tgaaggcaaa ggaccctgtt 901 ttgctttgaa atgctccaag caaatagtaa gatggtttgg aaaacatctg attgtggtga 961 aatcgaaaat ttccgtcaat aacaccaaac gctcccagct agtcattata aacatcgaga 1021 acagcatgat ggtcttgaat gaggaacttt tcgaaataga gtgcattttt cccactcctg 1081 attatgagaa ttgcattatt tttacaaaag atggggcaat atatactcta cgcgatcagg 1141 aaatccgcta taaattgcaa atgctttaca gcaagaattt gtacgacata gcactgaaac 1201 tcatagaagg tcaggcaacg tattccgatt tggttgccaa tgtgtttgtg aattatggcg 1261 atcacctttt gcaacgtggt gatatcgagg aatcagtcaa aatgtatgtt aaaacgatag 1321 gccaggtgcc gcctttccga gtaataagta agcttttgaa cttcagatac aatgagcact 1381 tgatacaata tctgcgcaaa ttggtcaaaa gtggagtggc accacaagag tactcggatc 1441 tactaaacaa ctgcgacaaa cggctagaat tgccaggtag cataaataaa atattccgaa 1501 atggagagtg ccccttcgat ttggattcaa tagaaccaat gggtcaagaa aaggatatca 1561 ccaaatattt tttggaaaaa agtgaaaaag ggcttgagtt attttcggaa aatggtcatt 1621 ggattgtcag caattacccc tttgatgtgg gagatatagt gaatcgtatt ttgtctaatg 1681 gactgacatc tgctcaccag cccatagacc tcttcataag ggtgatgcta cccctactgc 1741 tgtccaataa agagtgcgtt ttgaatgtac tcagttcgct agattttgat tacagaaaaa 1801 atccaaatat taatctaata tgggcagaaa ttttgctgca aaaatggaag aagttttcgg 1861 gcgaagaaat taatgctttg gccgatgcca ttaaagaaaa tgatttcaac atgagcatga 1921 atgacatttt cataatttgt cgtacccatc aatatctgcc tggcatcaag atgatgtacg 1981 aaagtttcgg tctaaatgcg ctcaatttta atagcttcct gaaatgctgt tttacattgc 2041 ctttagatac cagcgccatc gacttggaca caaataagta ctcactaatg tggatgcaaa 2101 ctttgagcaa ggacaatttg cagtcagcac aatcgtctgc cttcgtaaag tatattttga 2161 gtaaaacact tcacagtaat tcccactata cactgacaat actccagaag atttcggcaa 2221 atacaaattt caacttatcg catttaaaca aagctttacc aaaggacatt tttctaaaac 2281 agttcgcctt tgacaacttc cgcgatattg cagcgacaga taataagctt aagcaaatca 2341 aaagactttt gacagactat caacaaaagc ccatggagtt tcgtaatagc aaatgtgata 2401 tttgtaaaca accactaaaa catccatcca tttactattt gtgccagcat tcctatcaca 2461 aagaatgtct ttcttcatat tccgaaataa ctggttgttt ggcatgtgct gcaatttctc 2521 aaaaggattt cgaacgaagg aactccgaag taattccctt caataaagcc gaggatgcga 2581 gtagcactct caaaaatatt tcacataaat tagccgtagg agtttttgca caaggtccaa 2641 tttatcgatc taacaaaagc agcctttcga cggttgtcac ccacatacca ttggcaaaca 2701 gtattagcag tggacacgac atgtacagaa gtaagacagt ggaacagcca gcgaaatcga 2761 ctaatccatt tgaggaatct accaatcctt tcgatgacga agaagatgac tccaatcaat 2821 acgattcaaa tctaaatcca tttgaacagg gtaaacgttt aaactaaagc ttgcatacca 2881 aatcaaaaaa gaaaatcttt tatccaataa aaaggtgttt ccacaaaagt tgaaactta