Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans 60S ribosomal export protein NMD3


LOCUS       XM_013247580            1815 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106084106), mRNA.
ACCESSION   XM_013247580
VERSION     XM_013247580.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013247580.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1815
                     /gene="LOC106084106"
                     /note="60S ribosomal export protein NMD3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:106084106"
     CDS             146..1723
                     /gene="LOC106084106"
                     /codon_start=1
                     /product="60S ribosomal export protein NMD3"
                     /protein_id="XP_013103034.2"
                     /db_xref="GeneID:106084106"
                     /translation="MEYVDFTAAGNAGASASTSNSQTTMVLCCECGVVIQPNPSNMCV
                     TCLRNHVDITEGIPKQAVLHFCRNCERYLQPPGEWIQAALESRELLALCLKKLKGLKD
                     VKLVDAGFVWTEAHSKRIKLKLTVHGEVSGGTVLQQVFIVEFTVQNQMCDDCHRTEAK
                     DFWRCMVQVRQRAENKKTFYYLEQLILKHKAHENTLGIKPMHGGLDFYYASENHARKM
                     VDFLQTMVPVKVTSSKRLISHDIHSNNFNYKYTWSVEIAPLSKDSAVCLPKKLRQQLG
                     NLSPISLVHKVTSGIHLIDPLTAQIAELSGQVFYRAPFEAICNPKQLVEYVVMDVEII
                     MDKDRKYYPGQGQLSFRHVLCDIWVVRACELGINDNPIHTRSHLGHILKVGDSALGYN
                     LGEANINNPEYDKLNAEQIPDVVLVRKCYTDRNTRSNQRLWKLRHLADEATDERSKHD
                     YHEFLEDLEEDPDYRKQVYIYRDTKKQLPVDGGDTLGFNDNVPRVTLAEMLEDLTLEC
                     ADDEMGDIEENADEPQL"
     polyA_site      1815
                     /gene="LOC106084106"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acttgatttg cccaagtcaa ttgcaccagc tgttttttct ctagcacgtg ttaaagttta
       61 tttgtttggc caggaatttc ataaaatcac tgttttattg ttttttcttc caattgcccc
      121 gaattaagtt agagaattgt gaaaaatgga gtacgtggat ttcactgctg ctggtaatgc
      181 aggcgcatct gcatctacat caaattccca aacaacaatg gtattatgtt gcgaatgcgg
      241 tgtagtcata caaccaaatc cttccaatat gtgtgtcacc tgtcttcgaa atcacgtaga
      301 catcaccgag ggaattccaa agcaagcagt cttgcatttt tgccgtaatt gtgaacggta
      361 tttgcagcca ccgggggaat ggatacaagc tgccctggaa tccagggaac tactggcgtt
      421 gtgtctaaag aaattaaaag gccttaaaga tgtcaagctg gtggacgctg gctttgtatg
      481 gaccgaggcc cattctaaac gtataaaatt gaagttgaca gtccatggcg aagtttcggg
      541 tggcacagtt ttgcagcagg tttttattgt ggaattcacc gtacaaaatc agatgtgtga
      601 tgattgccat cgtacagagg caaaagattt ttggcgttgc atggtgcagg tacgccaaag
      661 ggcggagaat aagaaaactt tttactactt ggaacagtta attttaaagc acaaggcaca
      721 cgaaaacacc ttgggaatca aaccgatgca tggtggtctg gacttttatt atgcaagtga
      781 gaatcacgct agaaaaatgg ttgatttcct gcaaacaatg gtaccagtca aagtaacttc
      841 ttcaaagcgc ctcatttcac atgacatcca cagcaacaac tttaactaca aatacacctg
      901 gtctgtggaa attgcaccct tatccaagga cagtgcagtg tgtctgccca aaaaattacg
      961 ccagcaactg ggtaatctat ctcccataag tcttgtgcat aaagttacca gtggaataca
     1021 tctgattgac ccgttaacgg ctcaaatagc cgaattgtcg ggccaagtat tttaccgcgc
     1081 cccatttgaa gccatatgta atccaaaaca acttgttgaa tatgtggtaa tggacgtgga
     1141 aatcatcatg gacaaagatc gcaaatacta cccaggtcag ggccaattgt ccttccgaca
     1201 tgtgctgtgt gatatatggg ttgttcgagc ctgcgagctt ggcatcaatg acaatcctat
     1261 acatacacgc agtcacttag gtcacattct aaaggtgggc gattctgctt tgggctataa
     1321 cttgggcgaa gcaaatataa ataatccaga gtacgataag ctgaatgcgg agcaaattcc
     1381 cgatgtagta ttggttagaa aatgctatac agaccgtaat actcgcagca atcaacgttt
     1441 atggaaacta cgccatttgg cagatgaagc caccgatgaa cgcagcaaac atgattatca
     1501 tgagttctta gaagacttgg aagaagatcc agattatcgt aaacaggttt acatatatcg
     1561 tgatactaaa aaacaattac cagttgatgg cggtgatacg ttgggcttca atgataatgt
     1621 tccacgtgta acattggccg aaatgttgga agacttaaca ttggagtgtg ctgatgatga
     1681 aatgggtgat attgaggaaa atgctgacga gccacaattg taggcgggaa atgaaaaaat
     1741 gtatacattt tataatgtaa acaaaattat ataattaaat attattaaat ataatatgaa
     1801 tatccccttt tgtaa