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LOCUS XM_013247380 1780 bp mRNA linear INV 02-SEP-2023 (LOC106084000), mRNA. ACCESSION XM_013247380 VERSION XM_013247380.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247380.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1780 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1780 /gene="LOC106084000" /note="E3 ubiquitin-protein ligase TRAIP; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:106084000" CDS 222..1736 /gene="LOC106084000" /codon_start=1 /product="E3 ubiquitin-protein ligase TRAIP" /protein_id="XP_013102834.2" /db_xref="GeneID:106084000" /translation="MSGLRLMCPICTDDFQENDDIYSTSCGHIYHFSCMRQWQSRATS CPQCRHHSPTSHKLYLIFNDAPAENTASASASAEDQEDLNAKLESSVDKINELNAQLQ EAEINFYHLQEQYTIEQELRKRSDQRIAEFTNNEENFLNLHAQYSEIETRIHLLEEEN ERLSLENEYKAEEISRKSREIATLQTNRLRFNDNQQLREQFSDTECHLRTLQEQNSNL ILENEYKSKELALKVKELTALKTARKGHNDASSDIAVNTKVNVLEQKLKCITVQLEKE IANNMQLSIEKIKLKSQMQRLEIQNNSKAFSKTSLANKATSASGAIAQDTNPNRAMQH SIVLQKFPYNEIRYPLENVVLSIAAKIGIPNANIEDIVKVNVLDRIHPNKKPKDVCMY VEFRTGLLKSEFLAKANLLKNDETFKGTFIKEYIDKQIHNIFLYAVRNLRGVGFRYID CKANCVVAKRNEQEFRLYSKKNVDELLCKAMNSPASLPRETEEKIDEDYYKTQT" polyA_site 1780 /gene="LOC106084000" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtgcttact attatcagtt cactataact gaattatttt cttatattta tgtgccataa 61 gcaagtcgta ggtattagcg cgcacacatt gttatgacaa aaatttgcaa cgtgaagaag 121 gacatacaac ggatctggca ccatttgtat tgcttgagtt gatcgaatag ttaatcattt 181 gtctgcggaa gagaacaaag caaacaaacc agcggagaaa aatgtcaggc ctcaggttaa 241 tgtgtcccat ttgtacggac gatttccagg agaacgatga tatatactcc accagctgtg 301 gtcatattta tcatttttcc tgtatgcgtc aatggcagag ccgagcaaca agttgccccc 361 agtgccgtca ccatagtcca acttcgcata aattatactt aatttttaac gatgcccctg 421 ctgaaaacac cgcttcggct tctgcttctg ccgaagatca agaggatctg aatgcaaaat 481 tggaatccag cgtggacaaa ataaatgaac tcaatgccca actacaggag gcggaaatta 541 acttctatca cctgcaagaa cagtatacca ttgaacagga gctgcgcaaa agatccgatc 601 aaagaattgc tgagttcacc aataatgagg agaattttct caacttacat gcccaatact 661 cggagataga aactcgaatt catcttttgg aggaggaaaa tgaacgtctt agtcttgaaa 721 atgaatacaa agctgaggag atttcacgca aatcaagaga aattgctact ctgcaaacaa 781 acaggttaag atttaatgat aaccaacagc tgcgagaaca attttccgac actgaatgtc 841 acctcagaac tttgcaagag caaaattcaa atttaatttt ggaaaatgag tacaaatcaa 901 aagaacttgc gctaaaagtt aaagaactaa cagctctaaa gacggctaga aagggtcaca 961 atgatgcctc ttcggatatt gctgtcaata ccaaagttaa tgttctggag caaaagctga 1021 aatgtattac agtacaactg gagaaggaaa ttgccaataa tatgcagctg tccatagaaa 1081 aaataaaatt aaagagtcaa atgcaaagat tggaaattca aaataatagt aaagcctttt 1141 ctaagacatc tttggcaaat aaagccacaa gtgcatcggg ggctatagct caggacacaa 1201 atccaaatag agcgatgcag cacagtattg tgctacaaaa gtttccctac aatgaaatac 1261 gttatccatt ggagaatgta gttctatcca ttgcggccaa aataggtata ccaaatgcca 1321 acattgaaga tattgtcaaa gtgaacgtac tggaccgtat acatccgaac aaaaaaccca 1381 aggatgtatg catgtatgtg gaatttagga cagggctttt gaaatctgaa tttcttgcca 1441 aagcgaattt attgaaaaat gacgaaacat ttaaagggac atttataaag gagtatatcg 1501 ataagcagat acacaacata tttttatatg ctgtcagaaa tctacgtgga gtaggttttc 1561 gttatataga ctgtaaggcc aattgtgttg tagccaagag aaacgagcaa gaatttcgac 1621 tttatagtaa gaaaaatgtt gatgaattgt tgtgcaaagc catgaattca cctgcttcat 1681 taccaaggga aacggaagag aagattgatg aagactacta caaaacacaa acttaattag 1741 tatgttaata aatattatca atataattat tataggttaa