Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans probable ATP-dependent RNA helicase


LOCUS       XM_013247255            2685 bp    mRNA    linear   INV 02-SEP-2023
            DDX10 (LOC106083933), mRNA.
ACCESSION   XM_013247255
VERSION     XM_013247255.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013247255.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2685
                     /gene="LOC106083933"
                     /note="probable ATP-dependent RNA helicase DDX10; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:106083933"
     CDS             213..2609
                     /gene="LOC106083933"
                     /codon_start=1
                     /product="probable ATP-dependent RNA helicase DDX10"
                     /protein_id="XP_013102709.2"
                     /db_xref="GeneID:106083933"
                     /translation="MKEKQRAFPKKSKPISQRISLDNEIQQLQSQYESLSTKDLATIK
                     RFHDFPLSQKTIKGLVDAKFSQPTDIQRESIGPALQGKDVLAAAITGSGKTLAFLIPV
                     LEHLFISKWTRTDGVAAVIISPTRELAYQIFETLKKVGKYHDFSAGLIIGGKNLKFER
                     TRMDQCNILICTPGRLLQHMDENPIFNASTMEVLVLDEADRCLDMGFEQTLNAIIENF
                     PPQRQTLLFSATQTNSVKDLARLNLNNPVLIGHPDTKVEAGKTQLSSVKVVPDLLQQN
                     YVVIELEDKITMLWSFIKNHLKQKIIVFLSSCKQVKYIFEIFCKLRPGTSLLALYGTL
                     HQDRRIAIYNDFVKKSNVVLFATDIASRGLDFPSVNWVVQLDCPEDVTQYIHRAGRSA
                     RNKARGESLLVLLASEEEGMVEELGHKSITIRKILIDPKKLFSPRAKIEAYLAQNPEL
                     KASAQRAFVAYIKSVFLMKNKNIFKVMSMNFDAYAKSLGLVVTPRVRFLDRFLKKQNQ
                     QNKSEPLSDSENEREVKTKPNASMSLFETSKSDSESDGEDFIKIKRVNHDIKGNQNSD
                     GEQDELGDLPPPVLRKKEKLITKAALAKKALKKNLTINEKVKFDEEGREIADSRKQLQ
                     SELAKEYESKVNTTGGIDIEMAKQLLQEEDKYDKQRFRSLVKQKHKKLKEKLKRQDEE
                     EAAVDAEDNDDDGGEYSEGESENSVDLSWLPDPNKIYKNESNSEEESDEETNSRKGNK
                     FSKKLQRRRQDSSEDDHDVVNESDDDFAEPVRKKANVTSKLTLDDAEIIAQQLLGNGM
                     "
     polyA_site      2685
                     /gene="LOC106083933"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctttccata caatgaaaat tcatttttct tttgtgaaag caacaaataa atttttatag
       61 tcaacaaacc tgtttgtaga gtgtacgcca acttgttatc aaaaactgag tatcaattcc
      121 agtgaatatc atccacaact ttcccctcgc attcacaaac tggaacaaga agaagaaaaa
      181 ccaaaacacc aacctacttc aacaacaaca acatgaagga aaaacaacgt gcctttccca
      241 aaaaatcaaa acccatttcc caaagaatat cattggataa tgaaatccaa caattgcaat
      301 cccaatacga gtcgctgtca accaaggatc tagctacaat aaaacgtttt catgatttcc
      361 cattatcaca gaagactata aagggtttgg tcgatgcaaa attttctcag cccactgaca
      421 tccaacgtga gagcataggt ccggcacttc agggcaagga tgttttggcg gctgctatta
      481 caggaagcgg gaagacttta gcctttctca taccagtttt ggaacatttg ttcatttcca
      541 aatggacacg caccgatggc gtggctgcag ttatcatatc tcccaccaga gagttggctt
      601 accaaatatt tgaaacatta aaaaaagtgg gaaaatatca tgatttttct gccggcttaa
      661 ttattggagg aaaaaattta aaattcgaac gcacccgcat ggatcagtgt aatatactga
      721 tatgtactcc aggccgcttg ctacaacata tggatgaaaa tcccattttc aatgcatcta
      781 caatggaggt tttggttttg gacgaagctg atagatgtct ggatatggga ttcgaacaaa
      841 ccttaaatgc aatcatagaa aattttccac ctcaaaggca aactttacta ttttcggcca
      901 cacaaacaaa ttcagtgaag gacttggcac gtctgaatct aaataacccg gttttaatag
      961 gtcatcctga taccaaggtg gaagctggca aaacccagct ctcaagtgtt aaagtagtgc
     1021 cagatttatt gcaacaaaac tatgtggtaa tagagctgga ggacaaaatc acaatgctat
     1081 ggtcgtttat taagaatcac ttgaaacaga aaatcatcgt atttctctcg agttgcaaac
     1141 aagtcaagta tatctttgaa atattttgca agctaagacc gggcacaagc ctactggctt
     1201 tatatggtac actacaccaa gaccgcagaa tagccatcta caatgatttt gtaaagaaaa
     1261 gcaatgtggt gctgtttgcc actgatatag catctcgggg cttggatttt ccttctgtta
     1321 attgggtagt tcagctggat tgtcctgagg atgttacaca gtatatacat cgtgctggtc
     1381 gctcagcgcg caataaggcc agaggtgagt ctctgttagt tttactggct tccgaagagg
     1441 aaggcatggt agaggagctc ggccataaat caattaccat acggaaaata ctcatagatc
     1501 ccaaaaagtt attttcacct cgagctaaaa ttgaagccta tttggcacaa aatcctgagc
     1561 ttaaggcttc agctcagcgt gcatttgttg cttacattaa atctgtattt ctgatgaaaa
     1621 acaaaaatat cttcaaggta atgtccatga attttgatgc atatgccaaa tcgttgggcc
     1681 ttgtggtaac accgcgtgta cgtttcttag atcgcttctt gaagaaacaa aatcagcaaa
     1741 acaaatctga gcctctaagc gactccgaaa atgaaagaga agtcaaaaca aaaccaaatg
     1801 cgagcatgtc tctatttgag acttccaaaa gtgattctga atcagatggc gaggacttta
     1861 tcaagatcaa aagagttaat catgatataa aaggaaacca aaactcagat ggggagcagg
     1921 atgaacttgg tgatctgcct ccacctgttt taaggaaaaa agaaaaactc atcaccaaag
     1981 cggccttagc caagaaggcg ctaaagaaaa atcttaccat taacgaaaaa gttaaatttg
     2041 acgaagaggg cagggaaata gctgattctc gcaaacagtt gcaatcggaa ttggccaagg
     2101 agtatgagag caaagttaac acaactggcg gtatagacat agaaatggcc aaacaactgt
     2161 tgcaggaaga agataaatac gacaaacaac gtttccgttc tttggttaaa caaaaacata
     2221 aaaaactaaa agaaaagctt aaaaggcaag acgaagaaga agctgctgtg gatgcggaag
     2281 acaatgatga cgacggtggc gagtatagcg aaggtgaaag cgaaaattct gttgatttat
     2341 catggcttcc agacccgaat aaaatttata aaaatgaatc taattctgaa gaggaatcag
     2401 atgaggaaac aaattcgaga aaaggtaata aattttcgaa aaaacttcaa agaaggcggc
     2461 aagactccag tgaggatgat catgatgttg taaatgaaag tgatgatgac tttgccgaac
     2521 ctgtaagaaa gaaggccaat gttacatcaa aacttacact agatgatgca gaaataatag
     2581 cgcaacagtt attgggtaat ggcatgtgag aacatttcca attacttcta aaaacaaaaa
     2641 taaacataaa ataaaaacaa aaatttctcg ttaattttta taaaa