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LOCUS XM_013247244 2188 bp mRNA linear INV 02-SEP-2023 subunit alpha homolog (LOC106083922), mRNA. ACCESSION XM_013247244 VERSION XM_013247244.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247244.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2188 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2188 /gene="LOC106083922" /note="signal recognition particle receptor subunit alpha homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106083922" CDS 102..1958 /gene="LOC106083922" /codon_start=1 /product="signal recognition particle receptor subunit alpha homolog" /protein_id="XP_013102698.1" /db_xref="GeneID:106083922" /translation="MLDFVVVFSKGGIVLWKCNSTGENVTQCINNLIRSVILEERSTE SKHYEEDNLALQFKLDNELDLVYAVVYQKVIKLSYVDGFLSELQSAFKDKFGELLTSS RRFKASYEFDREFRATLAAAENSAKQSSKAPKAMRSFNESLKSKKTVASLIESSSDNK QKDQAKKVNIIESPKPTTADKEISNADVILENRKKLMGKMAGKKSPSENKNKSEKEKA GKKPRVWDLGGNSKDAAVLDRSKDQPEDVQYRNIQNDIVGTMHGRIRDLEVESDDDDD DAGYEDKDFASFPATKTDIKKKSGILSYFKGFVGGKTLSRTDLQPALEKMRDHLISKN VASDIAHKLCDSVCTSLEGKSVGTFDSVATMVKEALSTSLVRILSPKRRVDIIRDALE AKRHNRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHT RHLNALHPAEKHDGRTMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVCLVDTAGRMQD NEPLMRSLSKLIKVNDPDLVLFVGEALVGNEAVDQLVKFNQALADYSSDENPHIIDGI VLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLKAINVNAVVHSLMK" misc_feature 183..911 /gene="LOC106083922" /note="Signal recognition particle, alpha subunit, N-terminal; Region: SRP-alpha_N; pfam04086" /db_xref="CDD:461165" misc_feature 996..1211 /gene="LOC106083922" /note="SRP54-type protein, helical bundle domain; Region: SRP54_N; pfam02881" /db_xref="CDD:460734" misc_feature 1299..1949 /gene="LOC106083922" /note="C-terminal domain of signal recognition particle receptor alpha subunit; Region: SRalpha_C; cd17876" /db_xref="CDD:349785" misc_feature order(1320..1343,1353..1355,1407..1409,1416..1418, 1434..1436,1611..1613,1809..1811,1815..1817,1887..1898) /gene="LOC106083922" /note="active site" /db_xref="CDD:349785" misc_feature order(1323..1328,1413..1424,1431..1436,1443..1448, 1524..1526,1611..1613,1617..1625,1698..1700,1704..1718, 1725..1727,1809..1811,1815..1820,1824..1826,1896..1898) /gene="LOC106083922" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:349785" polyA_site 2188 /gene="LOC106083922" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatccagaag aaaaatacgg tattcattct tggtacgtat caccacgtat ccacgtatca 61 acgtacgttt actttccttt ctggtgtgtt ggaagacaga aatgttagat ttcgtggtgg 121 tctttagcaa aggtggaata gtattgtgga aatgcaactc cactggagag aacgtaacac 181 aatgtatcaa caaccttatt cgtagtgtta tattggaaga acggagtaca gagtcaaaac 241 actatgaaga ggacaactta gcattacaat ttaagttgga taacgagctt gacttagttt 301 acgctgttgt atatcaaaag gtcataaaac tatcatatgt agatggattt ttaagcgaat 361 tgcaatctgc attcaaggat aaattcgggg agctgcttac atcgtctcga cgttttaagg 421 caagttatga attcgatcgt gaattccgag ctacattggc ggctgccgag aactcggcca 481 agcaaagtag taaagccccc aaagctatgc ggtcctttaa tgaatcgctc aaatcgaaga 541 aaaccgtggc ttccctgatt gaaagtagta gcgacaataa acaaaaggac caggctaaaa 601 aggtgaacat tatagaaagt cctaagccga caactgcaga caaagaaatt tccaatgctg 661 atgttatatt ggaaaatcgt aagaagttaa tgggcaaaat ggcaggaaag aaaagtcctt 721 cggaaaacaa aaacaaatct gaaaaagaaa aggctggtaa aaagccaaga gtctgggact 781 tgggaggaaa ttccaaagat gctgctgttc tggaccgatc taaagaccag ccggaagacg 841 tacaatatag aaatattcaa aacgatatcg tcggtaccat gcacggccgc attcgagatt 901 tagaggttga aagtgatgat gatgacgatg atgctggtta tgaggacaag gattttgcca 961 gcttcccagc aactaagaca gacataaaaa agaaatcagg tattttatcc tacttcaagg 1021 gtttcgttgg tggcaaaaca ttgtcccgca cggatcttca gccagctttg gagaaaatgc 1081 gagatcatct catatcgaaa aatgttgctt ctgacattgc acataagctc tgcgattccg 1141 tgtgtacaag cttagagggg aaatctgtgg gaacttttga ctctgtcgca acaatggtca 1201 aagaagctct atccacatct ttggtacgca tcttatctcc caaacgacgc gttgatatta 1261 tacgtgatgc tctggaggcg aaaagacata atcgtccata cactataatt ttctgtggag 1321 tcaatggcgt gggaaaatcc acaaatttag ccaaaatatg tttctggtta attgaaaacg 1381 atttcaatgt gttaattgcg gcttgcgaca ccttccgtgc cggtgctgtt gagcaattgc 1441 gtacgcacac gcgtcattta aatgctcttc atcctgcgga aaaacatgat ggacgtacca 1501 tggtgcagct ttatgaaaaa ggttatggca aagatgctgc gggtattgca atggaagcaa 1561 ttaagttcgc ccacgacact cgtgttgatg tttgtttggt ggatacagct ggtcgtatgc 1621 aggataatga acctcttatg cgttccttat cgaaactgat taaagtcaat gacccggatt 1681 tggtgctttt tgttggcgaa gctttggtgg gtaatgaggc ggtggatcag ctggtcaaat 1741 tcaaccaagc ccttgcagac tactcttccg atgagaatcc tcacatcatc gacggcattg 1801 tacttacaaa gtttgatacc atagatgaca aagtcggcgc ggccatatca atgacatata 1861 ttactggaca acccattgtg tttgttggca ctgggcaaac ttattcggat ttgaaggcga 1921 tcaacgttaa tgccgttgtg cactcactca tgaaatagtt attaggatac atttttgaat 1981 tgtcatgcat tttttttgta gtgttttgtc ccgcacattc ttttttctat ttttgtttta 2041 tgtgttgttc tccgttaact ataatcctag ttttgtttct tcgttaagac ttagctcgag 2101 ttatggaact tttgtacatt tattattgaa aatcttaaaa ttataaatag atatttttct 2161 taaaaaatat aaaacaatcc taaattga