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LOCUS XM_013247240 7411 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_013247240 VERSION XM_013247240.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247240.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7411 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7411 /gene="LOC106083918" /note="spectrin beta chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106083918" CDS 96..6968 /gene="LOC106083918" /codon_start=1 /product="spectrin beta chain isoform X2" /protein_id="XP_013102694.2" /db_xref="GeneID:106083918" /translation="MTTDISIVRWDPSQGPGNEYIDEYEYDGGNSSSRLFERSRIKAL AEERESVQKKTFTKWVNSHLCRVNCRISDLYVDMRDGKHLIKLLEVLSGERLPKPTKG KMRIHCLENVDKALQFLREQRVHLENIGSHDIVDGNASLNLGLIWTIILRFQIQDITI EEVDNKETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQF EKLSKANPIHNLNNAFDVAEDKLGLAKLLDAEDVCVEHPDEKSIITYVVTYYHYFSKL KQETVQGKRIGKVVGIAMENDKMINDYEHFTSDLLKWIETTIQALGERVFENSLVGVQ GQLAQFSNYRTIEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAW ERLEKAEHERELALREELIRQEKLEQLAARFDRKASMRETWLSENQRLVSQDNFGFDL AAVEAAAKKHEAIETDIFAYEERVQAVVAVCDELESERYHDVKRILLRKENVMRLWNY LLELLRARRMRLEISLQLQQNFQEMLYILDNMEEIKQLLLTDDYGKHLMGVEDLLQKH SLVEADINILGERVKVVVQNSQKFLSDDPESYKPCDPEIIVSRVQQLEDAYAELVRLA VERRSRLEESRKLWQFYWDTADEENWIKEKEQIVSTDDIGHDLTTVNLLLSKHKALES EISSHDPQLQNVAKVGAELITEGHFGADRIKDRLKEILSKWDHLLDLTKYRRQRLENA VEYFQLFADADDVDNWMLDTLRIVSSEDVGRDEANVQSLLKKHKDVADELKNYAEVID ALHKQAENLKLNDTEKANVDKRLEAIDTRYKELTELGKLRKQRLLDALSLYKLMSEAD GVEQWIKEKTKMLDTMTPGKDIEDVEIMKHRFEGFDKEMNANASRVAVVNQLARQLLH VEHPNSDEILERQNRLNVEWSNLREKAESKMDELKSAHGVQTFYIECRETISWIEDKK RILTETDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLSSLGKEADSIESDHPEEAQII RDRIAQIELIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQTWLTKTQTDVASEDTP TSLPEAEQLLNQHQSIREEIDNYTEDYKNMMEYGERLTSESNTSDDPQYMFLRERLKA LKDGWEELHQMWENRQVLLSQSLDQQLFNRDARQTEVLLSQQEHFLSKDDTPVNLEQA ENQLKRHEAFLTTMEANDDKLNTLLQVADTLVEKEHFDADKIGKRAENIASRRDDNRR RALEQHEKLKNQVKLHEFLQDLDELSEWVQEKYATSQDETYRSAKTIHSKWTRHQAFE AEIAANKERLYEAEKAAEELSKEKPEFKDVIQPKLKELGKQFEDLETHTKEKGALLFD ANREVLVQQTCDDIDSYITELEKQIVTADTGNDLTSVNILMQKQQVIQTQMAVKERQV EEIDKQTEYLKKTVPEEKIEPIVTKKIAVLDRFEKIKAPLIERQKQLEKKKEAFQFCR DVEDEKLWIDEKLPVANSSDYGNSLFNVHVLKKKNQSLATEIDNHEPRINAICNNGRK LIDEGHEDAKKFEALISDLTQKWQELKDAVDNRKKNLLESEKIQQYFFDAQEAESWMS EQELYMMVEDRGKDEVSAQNLMKKHENLEQSIEDYANTIRQLGEVACQFNTDDVSSGD AVAVKQSQLDKLYAGLKDLAGERRARLNEALQLFMLNREVDDLEQWIADREVVAGSQE LGQDYDHVTLLSERFSEFARDTESVGGERVAKVNSIADNLIQAGHSDSATIAEWKDNL NESWQDLLELIETRTQMLAASRELHKFFHDCKDVLSRIIEKQHGVSDELGRDAGSVSA LQRKHYNFMQDLTTLYAQVQQIQEESAKLQDSYAGDKAKEITNREQEVLHAWANLQAM CDARKQKLADTGDLFRFFNMVRILMIWMEDLVRQMNTSEKARDVSGVELLMNNHQSLK AEIDTREDNFSACISLGKELLTRSHYASADIKDRLLQLNNSRNSLLRRWEERWENLQL ILEVYQFARDAAVAEAWLIAQEPYLLSSELGHTIDEVENLIKKHEAFEKSAAAQEERF SALERLTTFELKEMKKRQEQAEEAERQRIKEEMEAKAAAEAAEQAKREAERRDVVDVA ASEEAAERATAAAGEAHEGYLTRKHEWESTTKKASNRSWDKVYTVARSGRISFFKEQK GYKSNPELTFRGEPVYDLQGASVEIASDYTKKKHVLRVKLSNGGEFLLQAHDDNEMSQ WVSALKNQTDSAAVAESRSQTLPATSQKDEPKRRSFFTLKKK" polyA_site 7411 /gene="LOC106083918" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacttaattg gaatacagac aattttggga aaagcgaact gttttatttt actgattaac 61 aatttacgaa acggcgaaat taactatcga aagctatgac gacggacatt tcaattgttc 121 gatgggatcc tagtcagggt cctggcaacg aatacatcga cgaatatgaa tacgatggtg 181 gtaactctag ttcacggctt tttgaacgtt cccgtatcaa ggccttggcc gaggaacgtg 241 aaagtgtaca aaagaaaacc ttcaccaaat gggtaaactc gcatctgtgc cgtgtcaact 301 gtcgaatatc cgatttgtat gtcgatatgc gagatggaaa acatttaata aagttattgg 361 aagtattgtc cggcgaaaga ctgcctaaac ccacaaaggg taagatgaga attcactgtt 421 tagagaatgt ggacaaagca ttgcagtttt tgcgtgagca gcgtgtgcat ttggagaata 481 ttggttccca tgatattgtt gatggcaatg catcattaaa tttaggttta atatggacca 541 ttattttgag attccaaatc caagatataa caatcgaaga agtagacaat aaggaaacta 601 agtcagccaa ggatgctttg ctattgtggt gtcaaatgaa aaccgctggc taccacaatg 661 ttaatgtacg taacttcaca acatcgtggc gtgatggtct tgccttcaac gccattatcc 721 ataaacaccg tcctgatttg gtgcaattcg aaaaactttc gaaagcaaat ccaattcaca 781 acttgaacaa cgcctttgat gtggccgaag acaaacttgg cttggccaaa ctcttggatg 841 ccgaggatgt ttgtgtcgag catcccgatg agaaatcaat cattacttat gttgtaacct 901 actatcacta cttcagcaaa ctgaagcaag aaactgtcca gggcaaacgt attggcaagg 961 tggtcggtat tgccatggaa aatgacaaaa tgattaacga ctatgaacat ttcaccagcg 1021 atttgctgaa atggattgaa acaactatcc aggctttggg agagcgtgta ttcgaaaact 1081 ctctggtggg tgtgcagggc cagttggcac aattttccaa ttaccgcacc attgaaaaac 1141 caccaaagtt tgtggaaaag ggaaatttgg aagtgctttt gtttacgctt caatccaaaa 1201 tgagggctaa caaccaaaag ccatacactc ccaaggaggg aaaaatgatt tcagatatca 1261 acaaagcctg ggagcgcctt gaaaaggctg aacacgaacg tgaactggct ctgcgcgagg 1321 aattgattcg ccaagagaag ttggagcagc tggctgcacg tttcgatcgc aaggcatcaa 1381 tgcgtgaaac ttggctctcg gaaaatcaac gcctggttag tcaggataac ttcggttttg 1441 atctggccgc cgttgaagct gctgccaaga aacacgaagc catcgaaact gatatctttg 1501 cctacgaaga acgcgttcaa gctgttgtgg ccgtatgtga tgaattggaa tcggagcgct 1561 atcacgatgt caagcggatt ttgttgcgca aagagaatgt tatgcgtttg tggaactatt 1621 tgcttgaact cctgcgtgcg cgtcgtatgc gtctggaaat atctctgcaa ctgcaacaga 1681 acttccaaga aatgctatac attctggaca atatggagga aattaaacaa ttgttgttga 1741 ctgacgacta tggcaagcat ttgatgggtg ttgaagatct tttgcagaaa cattcattgg 1801 ttgaggccga catcaatatt ttgggcgaac gcgtgaaagt tgtagtacaa aattcacaga 1861 aattcctaag cgacgatcca gagtcttaca agccatgtga tcctgagatt atcgtcagcc 1921 gtgtgcaaca attggaagat gcctatgctg aattggtgcg cttggctgtt gaacgccgaa 1981 gccgtttgga agaaagtcgc aaattgtggc aattctattg ggacaccgcc gatgaggaga 2041 attggatcaa agagaaggaa caaattgttt ccactgatga cattggtcat gacttgacaa 2101 ctgtaaactt gttgcttagc aaacataagg cattggaatc tgagatatca tctcacgatc 2161 cccaactaca aaatgttgct aaagttggtg ccgagctcat tactgaggga cactttggtg 2221 ctgaccgaat taaggatcgt ctaaaggaaa ttctttctaa atgggatcat cttctcgatc 2281 ttaccaaata ccgacgtcaa cgcctagaaa atgctgttga gtacttccaa ttgtttgctg 2341 atgctgatga tgtcgataac tggatgttgg acactttgcg catagtatcc agtgaagacg 2401 tcggccgcga cgaggcgaat gttcagtctc ttctcaagaa gcacaaagac gttgccgacg 2461 agcttaagaa ctatgccgag gtcatcgatg ctttgcacaa gcaagcagag aatttgaaat 2521 tgaacgatac ggagaaggcc aacgtcgaca agcgtttgga agccattgat acccgttata 2581 aggaactcac agagttgggc aaattgcgca agcagcgctt gcttgacgca ttaagtctgt 2641 acaaacttat gtccgaagcc gatggcgttg aacaatggat caaggagaag actaagatgc 2701 ttgacaccat gacacccgga aaggacattg aagatgtcga aatcatgaag catcgtttcg 2761 aaggattcga taaagaaatg aatgcgaatg cttctcgtgt ggctgttgtc aaccagttgg 2821 ccagacaatt gttgcatgtt gaacacccca actcagatga aattctggaa cgtcaaaatc 2881 gtctcaatgt ggagtggtcc aacctccgcg aaaaggccga atctaaaatg gatgagctta 2941 aatctgctca tggtgtgcaa acgttctaca tcgagtgccg agaaacaatt tcctggattg 3001 aggataagaa acgtatcctt actgaaactg atagtttgga gatggatctt accggtgtaa 3061 tgacactgca gcgacgttta agcggcatgg aacgcgattt ggccgccatt caagccaaac 3121 tttccagctt gggcaaagaa gccgatagca ttgaaagcga tcacccagaa gaggctcaaa 3181 ttatacgcga ccgcattgct cagatcgaac ttatctggga gcaattgact cagatgctga 3241 aggaacgcga ttccaaattg gaggaagctg gtgatttgca caggttcttg agagacttgg 3301 atcacttcca gacctggttg accaaaacac aaaccgatgt ggcttccgaa gatacaccaa 3361 cctcgctgcc agaagccgaa caactgctta atcaacatca atcaatccga gaagaaatcg 3421 ataattacac cgaagattat aagaacatga tggagtatgg tgaacgcctg acatccgaat 3481 cgaatacttc cgacgaccct caatacatgt tcttgcgtga acgtttgaag gctctgaagg 3541 atggttggga agaattgcac caaatgtggg agaaccgtca agtcttgctc tctcaaagcc 3601 ttgatcaaca attattcaat cgcgatgcgc gtcaaactga agttttgctt agccaacaag 3661 agcacttcct tagcaaggat gacactccgg ttaatttaga acaagccgag aatcaactaa 3721 aacgtcatga agccttcctt accacaatgg aagcgaacga tgataaactc aatactctgt 3781 tgcaagttgc agataccctt gtcgagaagg agcactttga cgccgacaag attggaaagc 3841 gagcagaaaa cattgccagt cgtcgtgatg ataatcgtcg tagagccctg gagcagcacg 3901 agaagttgaa gaatcaagtt aaacttcatg aattccttca agatttggat gagctatccg 3961 aatgggtgca agaaaagtat gccacttctc aggatgaaac ctaccgaagt gctaaaacca 4021 ttcattccaa atggactagg catcaagctt ttgaagctga aatcgccgca aacaaagaac 4081 gcctctacga ggcagagaag gccgcagaag aactttccaa ggaaaagccc gaattcaagg 4141 atgtcattca acctaaactg aaggaactgg gcaagcagtt cgaagacctg gaaacacaca 4201 ccaaagagaa gggtgctctg ctattcgacg ctaaccgcga agtcctcgtg cagcaaactt 4261 gcgatgacat tgattcctac atcaccgagt tagagaaaca aattgttacc gcggacactg 4321 gcaatgatct aacatccgtc aacattttga tgcagaaaca acaggtcata cagacacaga 4381 tggccgtcaa ggaacgccaa gttgaagaga ttgacaaaca aaccgaatat ttgaagaaga 4441 ctgttccgga ggaaaagatt gaaccaattg taaccaagaa gattgcggtt cttgatcgct 4501 ttgaaaagat aaaggctcct ctcatcgaac gccaaaagca gttggaaaag aaaaaggaag 4561 ctttccaatt ttgtcgcgat gtcgaggatg aaaaattgtg gattgatgaa aaactgcctg 4621 ttgccaactc ttcggactac ggcaactctc tgttcaatgt gcacgttctg aagaagaaga 4681 accaatcatt ggccaccgaa atcgataacc acgaaccacg tattaatgcc atatgcaaca 4741 atggccgtaa acttattgac gagggccacg aggatgctaa gaaattcgag gctttaatta 4801 gcgacttgac gcagaaatgg caagaactga aggacgccgt tgacaaccgc aagaaaaatc 4861 tcttggagtc cgaaaaaata caacaatact tcttcgacgc tcaagaagct gagtcgtgga 4921 tgagcgaaca agaactatac atgatggtcg aggatcgtgg caaggatgaa gtgagtgccc 4981 agaacctaat gaagaaacac gagaatctgg aacagtctat tgaagactac gccaacacca 5041 ttcgtcaatt gggtgaggtg gcatgccagt tcaacactga cgatgtgtcc agcggtgatg 5101 ctgtagctgt taaacagtca caattggaca aattatatgc cggtctgaag gatttggcgg 5161 gcgaacgacg tgcccgttta aatgaagccc tgcaattgtt catgcttaac cgcgaagtgg 5221 acgatttgga gcaatggatc gccgatcgcg aagttgtcgc cggttcgcaa gagttgggcc 5281 aggactatga ccatgtgact ttgttgtccg aacgcttcag tgagtttgcc cgcgatactg 5341 aatccgttgg tggcgaacgt gtagcaaagg ttaacagtat tgccgacaat ctgattcaag 5401 ccggccactc agattcagcc acaattgccg aatggaaaga caatctgaat gaatcctggc 5461 aagacctatt ggaattaatt gaaacgcgca cacaaatgct tgccgcttcc cgcgaattgc 5521 acaaattctt ccatgactgc aaagacgttc ttagccgcat tattgaaaag caacatggcg 5581 tatctgacga attgggtcgc gatgctggtt cagtctccgc tttgcaacgt aagcactata 5641 acttcatgca agatctaacc accctctacg cgcaagtaca acaaatccaa gaagagtctg 5701 ccaaattgca agattcctat gccggtgaca aggctaaaga gatcacgaat cgcgaacaag 5761 aggtcctgca tgcgtgggcg aacctgcaag ctatgtgcga tgcacgaaaa caaaagctgg 5821 ccgatactgg tgacttgttc cgcttcttta atatggtacg cattctaatg atctggatgg 5881 aagatttggt gcgacaaatg aacacatcgg agaaggctcg cgatgtctct ggcgttgagc 5941 tgcttatgaa caatcaccaa agcctaaagg ctgaaataga tacacgcgaa gacaactttt 6001 cggcttgcat atccttgggc aaagagctct tgacgcgcag tcattatgca tctgccgaca 6061 ttaaagacag actcctacaa ttgaacaaca gtcgaaactc attgcttcga agatgggagg 6121 aacgttggga aaacttacaa ctaattctgg aagtatatca attcgctaga gatgctgccg 6181 ttgccgaagc ttggcttata gctcaagaac catacctatt gtcatcagaa ttgggtcata 6241 ccattgatga agtggaaaat cttattaaaa aacacgaagc ttttgaaaaa tctgctgctg 6301 cccaagaaga gcgtttcagt gcacttgagc gtttaacaac ctttgagctt aaagaaatga 6361 agaaacgtca agagcaggcg gaagaggcag agagacaacg cattaaggaa gagatggagg 6421 ctaaagcggc agccgaagca gcggaacaag cgaaacgaga agctgagaga cgcgatgttg 6481 tcgatgtggc agcatccgag gaagcagccg aacgggcgac agctgccgca ggtgaagctc 6541 atgaaggcta tttaacgaga aaacatgaat gggagtctac cacaaagaaa gcatcaaaca 6601 gatcttggga taaggtatat acagtggctc gaagtggtcg catttcattc ttcaaagaac 6661 aaaagggtta taagagtaat cctgaattga ctttccgcgg agaaccagta tatgacttgc 6721 aaggggcatc tgttgaaatt gccagcgact acacaaagaa gaagcatgtt ttaagagtca 6781 agctttcaaa cggcggtgag ttcttactgc aagcccatga tgataatgaa atgtcacaat 6841 gggtctctgc tctgaagaat caaactgatt cggcagctgt tgcagaaagt agatcccaga 6901 cgttaccagc cacatcgcaa aaggacgaac caaagcgtag gtctttcttt actttgaaga 6961 agaagtaaat taggtagggc aacaacaaaa caccataaac caacacacac acacacacat 7021 ttacaccgca acatttattt aacgcttaaa taaatataaa attgtaaggt ttaataatta 7081 aattataaat gatgaatgaa gaataatagt tattatttat atattgctta tataatataa 7141 aaaccccgat aagtgcacca taaaaacaaa acaaaacaaa atgctgctat taaatttaat 7201 cttacgtata ttgtatctta tttattattt aacgaaacaa aaacaactta taaggaatcc 7261 aatcaaaaat aaaaaaactc atgtatgcat ttgaatgtat tcaataaaaa tataaattta 7321 ttccctctaa attttaatga aaatcttggt aaaaacccaa tatcctggac aaacatgttg 7381 agaataaagg cgtgcagaaa aacgaaacag a