Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013247239 7476 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013247239 VERSION XM_013247239.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247239.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7476 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7476 /gene="LOC106083918" /note="spectrin beta chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106083918" CDS 110..7033 /gene="LOC106083918" /codon_start=1 /product="spectrin beta chain isoform X1" /protein_id="XP_013102693.2" /db_xref="GeneID:106083918" /translation="MTTDISIVRWDPSQGPGNEYIDEYEYDGGNSSSRLFERSRIKAL AEERESVQKKTFTKWVNSHLCRVNCRISDLYVDMRDGKHLIKLLEVLSGERLPKPTKG KMRIHCLENVDKALQFLREQRVHLENIGSHDIVDGNASLNLGLIWTIILRFQIQDITI EEVDNKETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQF EKLSKANPIHNLNNAFDVAEDKLGLAKLLDAEDVCVEHPDEKSIITYVVTYYHYFSKL KQETVQGKRIGKVVGIAMENDKMINDYEHFTSDLLKWIETTIQALGERVFENSLVGVQ GQLAQFSNYRTIEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAW ERLEKAEHERELALREELIRQEKLEQLAARFDRKASMRETWLSENQRLVSQDNFGFDL AAVEAAAKKHEAIETDIFAYEERVQAVVAVCDELESERYHDVKRILLRKENVMRLWNY LLELLRARRMRLEISLQLQQNFQEMLYILDNMEEIKQLLLTDDYGKHLMGVEDLLQKH SLVEADINILGERVKVVVQNSQKFLSDDPESYKPCDPEIIVSRVQQLEDAYAELVRLA VERRSRLEESRKLWQFYWDTADEENWIKEKEQIVSTDDIGHDLTTVNLLLSKHKALES EISSHDPQLQNVAKVGAELITEGHFGADRIKDRLKEILSKWDHLLDLTKYRRQRLENA VEYFQLFADADDVDNWMLDTLRIVSSEDVGRDEANVQSLLKKHKDVADELKNYAEVID ALHKQAENLKLNDTEKANVDKRLEAIDTRYKELTELGKLRKQRLLDALSLYKLMSEAD GVEQWIKEKTKMLDTMTPGKDIEDVEIMKHRFEGFDKEMNANASRVAVVNQLARQLLH VEHPNSDEILERQNRLNVEWSNLREKAESKMDELKSAHGVQTFYIECRETISWIEDKK RILTETDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLSSLGKEADSIESDHPEEAQII RDRIAQIELIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQTWLTKTQTDVASEDTP TSLPEAEQLLNQHQSIREEIDNYTEDYKNMMEYGERLTSESNTSDDPQYMFLRERLKA LKDGWEELHQMWENRQVLLSQSLDQQLFNRDARQTEVLLSQQEHFLSKDDTPVNLEQA ENQLKRHEAFLTTMEANDDKLNTLLQVADTLVEKEHFDADKIGKRAENIASRRDDNRR RALEQHEKLKNQVKLHEFLQDLDELSEWVQEKYATSQDETYRSAKTIHSKWTRHQAFE AEIAANKERLYEAEKAAEELSKEKPEFKDVIQPKLKELGKQFEDLETHTKEKGALLFD ANREVLVQQTCDDIDSYITELEKQIVTADTGNDLTSVNILMQKQQVIQTQMAVKERQV EEIDKQTEYLKKTVPEEKIEPIVTKKIAVLDRFEKIKAPLIERQKQLEKKKEAFQFCR DVEDEKLWIDEKLPVANSSDYGNSLFNVHVLKKKNQSLATEIDNHEPRINAICNNGRK LIDEGHEDAKKFEALISDLTQKWQELKDAVDNRKKNLLESEKIQQYFFDAQEAESWMS EQELYMMVEDRGKDEVSAQNLMKKHENLEQSIEDYANTIRQLGEVACQFNTDDVSSGD AVAVKQSQLDKLYAGLKDLAGERRARLNEALQLFMLNREVDDLEQWIADREVVAGSQE LGQDYDHVTLLSERFSEFARDTESVGGERVAKVNSIADNLIQAGHSDSATIAEWKDNL NESWQDLLELIETRTQMLAASRELHKFFHDCKDVLSRIIEKQHGVSDELGRDAGSVSA LQRKHYNFMQDLTTLYAQVQQIQEESAKLQDSYAGDKAKEITNREQEVLHAWANLQAM CDARKQKLADTGDLFRFFNMVRILMIWMEDLVRQMNTSEKARDVSGVELLMNNHQSLK AEIDTREDNFSACISLGKELLTRSHYASADIKDRLLQLNNSRNSLLRRWEERWENLQL ILEVYQFARDAAVAEAWLIAQEPYLLSSELGHTIDEVENLIKKHEAFEKSAAAQEERF SALERLTTFELKEMKKRQEQAEEAERQRIKEEMEAKAAAEAAEQAKREAERRDVVDVA ASEEAAAVVDTAAEVERTAETQTERATAAAGEAHEGYLTRKHEWESTTKKASNRSWDK VYTVARSGRISFFKEQKGYKSNPELTFRGEPVYDLQGASVEIASDYTKKKHVLRVKLS NGGEFLLQAHDDNEMSQWVSALKNQTDSAAVAESRSQTLPATSQKDEPKRRSFFTLKK K" polyA_site 7476 /gene="LOC106083918" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taagtgagaa aaaatacata ttaaaacatt tttgctgtgg caacagagac gaaatagcta 61 atcaagtgtg aaaattgaaa acgaaagaat aaattaacta tcgaaagcta tgacgacgga 121 catttcaatt gttcgatggg atcctagtca gggtcctggc aacgaataca tcgacgaata 181 tgaatacgat ggtggtaact ctagttcacg gctttttgaa cgttcccgta tcaaggcctt 241 ggccgaggaa cgtgaaagtg tacaaaagaa aaccttcacc aaatgggtaa actcgcatct 301 gtgccgtgtc aactgtcgaa tatccgattt gtatgtcgat atgcgagatg gaaaacattt 361 aataaagtta ttggaagtat tgtccggcga aagactgcct aaacccacaa agggtaagat 421 gagaattcac tgtttagaga atgtggacaa agcattgcag tttttgcgtg agcagcgtgt 481 gcatttggag aatattggtt cccatgatat tgttgatggc aatgcatcat taaatttagg 541 tttaatatgg accattattt tgagattcca aatccaagat ataacaatcg aagaagtaga 601 caataaggaa actaagtcag ccaaggatgc tttgctattg tggtgtcaaa tgaaaaccgc 661 tggctaccac aatgttaatg tacgtaactt cacaacatcg tggcgtgatg gtcttgcctt 721 caacgccatt atccataaac accgtcctga tttggtgcaa ttcgaaaaac tttcgaaagc 781 aaatccaatt cacaacttga acaacgcctt tgatgtggcc gaagacaaac ttggcttggc 841 caaactcttg gatgccgagg atgtttgtgt cgagcatccc gatgagaaat caatcattac 901 ttatgttgta acctactatc actacttcag caaactgaag caagaaactg tccagggcaa 961 acgtattggc aaggtggtcg gtattgccat ggaaaatgac aaaatgatta acgactatga 1021 acatttcacc agcgatttgc tgaaatggat tgaaacaact atccaggctt tgggagagcg 1081 tgtattcgaa aactctctgg tgggtgtgca gggccagttg gcacaatttt ccaattaccg 1141 caccattgaa aaaccaccaa agtttgtgga aaagggaaat ttggaagtgc ttttgtttac 1201 gcttcaatcc aaaatgaggg ctaacaacca aaagccatac actcccaagg agggaaaaat 1261 gatttcagat atcaacaaag cctgggagcg ccttgaaaag gctgaacacg aacgtgaact 1321 ggctctgcgc gaggaattga ttcgccaaga gaagttggag cagctggctg cacgtttcga 1381 tcgcaaggca tcaatgcgtg aaacttggct ctcggaaaat caacgcctgg ttagtcagga 1441 taacttcggt tttgatctgg ccgccgttga agctgctgcc aagaaacacg aagccatcga 1501 aactgatatc tttgcctacg aagaacgcgt tcaagctgtt gtggccgtat gtgatgaatt 1561 ggaatcggag cgctatcacg atgtcaagcg gattttgttg cgcaaagaga atgttatgcg 1621 tttgtggaac tatttgcttg aactcctgcg tgcgcgtcgt atgcgtctgg aaatatctct 1681 gcaactgcaa cagaacttcc aagaaatgct atacattctg gacaatatgg aggaaattaa 1741 acaattgttg ttgactgacg actatggcaa gcatttgatg ggtgttgaag atcttttgca 1801 gaaacattca ttggttgagg ccgacatcaa tattttgggc gaacgcgtga aagttgtagt 1861 acaaaattca cagaaattcc taagcgacga tccagagtct tacaagccat gtgatcctga 1921 gattatcgtc agccgtgtgc aacaattgga agatgcctat gctgaattgg tgcgcttggc 1981 tgttgaacgc cgaagccgtt tggaagaaag tcgcaaattg tggcaattct attgggacac 2041 cgccgatgag gagaattgga tcaaagagaa ggaacaaatt gtttccactg atgacattgg 2101 tcatgacttg acaactgtaa acttgttgct tagcaaacat aaggcattgg aatctgagat 2161 atcatctcac gatccccaac tacaaaatgt tgctaaagtt ggtgccgagc tcattactga 2221 gggacacttt ggtgctgacc gaattaagga tcgtctaaag gaaattcttt ctaaatggga 2281 tcatcttctc gatcttacca aataccgacg tcaacgccta gaaaatgctg ttgagtactt 2341 ccaattgttt gctgatgctg atgatgtcga taactggatg ttggacactt tgcgcatagt 2401 atccagtgaa gacgtcggcc gcgacgaggc gaatgttcag tctcttctca agaagcacaa 2461 agacgttgcc gacgagctta agaactatgc cgaggtcatc gatgctttgc acaagcaagc 2521 agagaatttg aaattgaacg atacggagaa ggccaacgtc gacaagcgtt tggaagccat 2581 tgatacccgt tataaggaac tcacagagtt gggcaaattg cgcaagcagc gcttgcttga 2641 cgcattaagt ctgtacaaac ttatgtccga agccgatggc gttgaacaat ggatcaagga 2701 gaagactaag atgcttgaca ccatgacacc cggaaaggac attgaagatg tcgaaatcat 2761 gaagcatcgt ttcgaaggat tcgataaaga aatgaatgcg aatgcttctc gtgtggctgt 2821 tgtcaaccag ttggccagac aattgttgca tgttgaacac cccaactcag atgaaattct 2881 ggaacgtcaa aatcgtctca atgtggagtg gtccaacctc cgcgaaaagg ccgaatctaa 2941 aatggatgag cttaaatctg ctcatggtgt gcaaacgttc tacatcgagt gccgagaaac 3001 aatttcctgg attgaggata agaaacgtat ccttactgaa actgatagtt tggagatgga 3061 tcttaccggt gtaatgacac tgcagcgacg tttaagcggc atggaacgcg atttggccgc 3121 cattcaagcc aaactttcca gcttgggcaa agaagccgat agcattgaaa gcgatcaccc 3181 agaagaggct caaattatac gcgaccgcat tgctcagatc gaacttatct gggagcaatt 3241 gactcagatg ctgaaggaac gcgattccaa attggaggaa gctggtgatt tgcacaggtt 3301 cttgagagac ttggatcact tccagacctg gttgaccaaa acacaaaccg atgtggcttc 3361 cgaagataca ccaacctcgc tgccagaagc cgaacaactg cttaatcaac atcaatcaat 3421 ccgagaagaa atcgataatt acaccgaaga ttataagaac atgatggagt atggtgaacg 3481 cctgacatcc gaatcgaata cttccgacga ccctcaatac atgttcttgc gtgaacgttt 3541 gaaggctctg aaggatggtt gggaagaatt gcaccaaatg tgggagaacc gtcaagtctt 3601 gctctctcaa agccttgatc aacaattatt caatcgcgat gcgcgtcaaa ctgaagtttt 3661 gcttagccaa caagagcact tccttagcaa ggatgacact ccggttaatt tagaacaagc 3721 cgagaatcaa ctaaaacgtc atgaagcctt ccttaccaca atggaagcga acgatgataa 3781 actcaatact ctgttgcaag ttgcagatac ccttgtcgag aaggagcact ttgacgccga 3841 caagattgga aagcgagcag aaaacattgc cagtcgtcgt gatgataatc gtcgtagagc 3901 cctggagcag cacgagaagt tgaagaatca agttaaactt catgaattcc ttcaagattt 3961 ggatgagcta tccgaatggg tgcaagaaaa gtatgccact tctcaggatg aaacctaccg 4021 aagtgctaaa accattcatt ccaaatggac taggcatcaa gcttttgaag ctgaaatcgc 4081 cgcaaacaaa gaacgcctct acgaggcaga gaaggccgca gaagaacttt ccaaggaaaa 4141 gcccgaattc aaggatgtca ttcaacctaa actgaaggaa ctgggcaagc agttcgaaga 4201 cctggaaaca cacaccaaag agaagggtgc tctgctattc gacgctaacc gcgaagtcct 4261 cgtgcagcaa acttgcgatg acattgattc ctacatcacc gagttagaga aacaaattgt 4321 taccgcggac actggcaatg atctaacatc cgtcaacatt ttgatgcaga aacaacaggt 4381 catacagaca cagatggccg tcaaggaacg ccaagttgaa gagattgaca aacaaaccga 4441 atatttgaag aagactgttc cggaggaaaa gattgaacca attgtaacca agaagattgc 4501 ggttcttgat cgctttgaaa agataaaggc tcctctcatc gaacgccaaa agcagttgga 4561 aaagaaaaag gaagctttcc aattttgtcg cgatgtcgag gatgaaaaat tgtggattga 4621 tgaaaaactg cctgttgcca actcttcgga ctacggcaac tctctgttca atgtgcacgt 4681 tctgaagaag aagaaccaat cattggccac cgaaatcgat aaccacgaac cacgtattaa 4741 tgccatatgc aacaatggcc gtaaacttat tgacgagggc cacgaggatg ctaagaaatt 4801 cgaggcttta attagcgact tgacgcagaa atggcaagaa ctgaaggacg ccgttgacaa 4861 ccgcaagaaa aatctcttgg agtccgaaaa aatacaacaa tacttcttcg acgctcaaga 4921 agctgagtcg tggatgagcg aacaagaact atacatgatg gtcgaggatc gtggcaagga 4981 tgaagtgagt gcccagaacc taatgaagaa acacgagaat ctggaacagt ctattgaaga 5041 ctacgccaac accattcgtc aattgggtga ggtggcatgc cagttcaaca ctgacgatgt 5101 gtccagcggt gatgctgtag ctgttaaaca gtcacaattg gacaaattat atgccggtct 5161 gaaggatttg gcgggcgaac gacgtgcccg tttaaatgaa gccctgcaat tgttcatgct 5221 taaccgcgaa gtggacgatt tggagcaatg gatcgccgat cgcgaagttg tcgccggttc 5281 gcaagagttg ggccaggact atgaccatgt gactttgttg tccgaacgct tcagtgagtt 5341 tgcccgcgat actgaatccg ttggtggcga acgtgtagca aaggttaaca gtattgccga 5401 caatctgatt caagccggcc actcagattc agccacaatt gccgaatgga aagacaatct 5461 gaatgaatcc tggcaagacc tattggaatt aattgaaacg cgcacacaaa tgcttgccgc 5521 ttcccgcgaa ttgcacaaat tcttccatga ctgcaaagac gttcttagcc gcattattga 5581 aaagcaacat ggcgtatctg acgaattggg tcgcgatgct ggttcagtct ccgctttgca 5641 acgtaagcac tataacttca tgcaagatct aaccaccctc tacgcgcaag tacaacaaat 5701 ccaagaagag tctgccaaat tgcaagattc ctatgccggt gacaaggcta aagagatcac 5761 gaatcgcgaa caagaggtcc tgcatgcgtg ggcgaacctg caagctatgt gcgatgcacg 5821 aaaacaaaag ctggccgata ctggtgactt gttccgcttc tttaatatgg tacgcattct 5881 aatgatctgg atggaagatt tggtgcgaca aatgaacaca tcggagaagg ctcgcgatgt 5941 ctctggcgtt gagctgctta tgaacaatca ccaaagccta aaggctgaaa tagatacacg 6001 cgaagacaac ttttcggctt gcatatcctt gggcaaagag ctcttgacgc gcagtcatta 6061 tgcatctgcc gacattaaag acagactcct acaattgaac aacagtcgaa actcattgct 6121 tcgaagatgg gaggaacgtt gggaaaactt acaactaatt ctggaagtat atcaattcgc 6181 tagagatgct gccgttgccg aagcttggct tatagctcaa gaaccatacc tattgtcatc 6241 agaattgggt cataccattg atgaagtgga aaatcttatt aaaaaacacg aagcttttga 6301 aaaatctgct gctgcccaag aagagcgttt cagtgcactt gagcgtttaa caacctttga 6361 gcttaaagaa atgaagaaac gtcaagagca ggcggaagag gcagagagac aacgcattaa 6421 ggaagagatg gaggctaaag cggcagccga agcagcggaa caagcgaaac gagaagctga 6481 gagacgcgat gttgtcgatg tggcagcatc cgaggaagca gccgctgtgg tcgatactgc 6541 cgctgaagtt gagcgtacgg ctgagacaca aacagaacgg gcgacagctg ccgcaggtga 6601 agctcatgaa ggctatttaa cgagaaaaca tgaatgggag tctaccacaa agaaagcatc 6661 aaacagatct tgggataagg tatatacagt ggctcgaagt ggtcgcattt cattcttcaa 6721 agaacaaaag ggttataaga gtaatcctga attgactttc cgcggagaac cagtatatga 6781 cttgcaaggg gcatctgttg aaattgccag cgactacaca aagaagaagc atgttttaag 6841 agtcaagctt tcaaacggcg gtgagttctt actgcaagcc catgatgata atgaaatgtc 6901 acaatgggtc tctgctctga agaatcaaac tgattcggca gctgttgcag aaagtagatc 6961 ccagacgtta ccagccacat cgcaaaagga cgaaccaaag cgtaggtctt tctttacttt 7021 gaagaagaag taaattaggt agggcaacaa caaaacacca taaaccaaca cacacacaca 7081 cacatttaca ccgcaacatt tatttaacgc ttaaataaat ataaaattgt aaggtttaat 7141 aattaaatta taaatgatga atgaagaata atagttatta tttatatatt gcttatataa 7201 tataaaaacc ccgataagtg caccataaaa acaaaacaaa acaaaatgct gctattaaat 7261 ttaatcttac gtatattgta tcttatttat tatttaacga aacaaaaaca acttataagg 7321 aatccaatca aaaataaaaa aactcatgta tgcatttgaa tgtattcaat aaaaatataa 7381 atttattccc tctaaatttt aatgaaaatc ttggtaaaaa cccaatatcc tggacaaaca 7441 tgttgagaat aaaggcgtgc agaaaaacga aacaga