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LOCUS XM_013247235 8906 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X5, mRNA. ACCESSION XM_013247235 VERSION XM_013247235.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247235.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8906 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8906 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083916" CDS 232..4827 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X2" /protein_id="XP_013102689.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQTDVSGSKDSLATHDAEW LDDKTDGRRNINKNSIWNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNM KNFQLVSEAVAKMNFGGDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQI YENEDCTESDSCASSIERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMF GSYVSPPEIPLHYQRMVTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETL NEYNMNAKCLKEFEKSEKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTES QFEKLMISDKVEIPIFLIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTV IELLDIPVNAVATALKDFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRS CRLMALKTLLEKLPPANFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDF TDMGHFEQLRPYLEDIVQTMIDQYPYLFCGEDAFVMV" misc_feature 286..309 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(292..312,619..621,799..804,820..822,895..903) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 448..450 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 460..468 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <673..951 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(799..804,817..822) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 895..903 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 991..1230 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1897..>3096 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4225..4794 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4297..4299,4411..4413,4423..4425,4669..4671, 4678..4683,4765..4767) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4297..4299 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 8906 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcctcggctt cgtactctgg tgacaagtcg ggtgtgtatt tacgtggaaa aagaattgtc 61 gggggcctcc ttgcaccatt attttgcgta aaactcggat aaacaatttt tataatggct 121 caacataccc cagaacaacg aaattcagag aaatgcgagc gtggaatcta aaactaatac 181 aatagttaga aaataattaa caagaaacat tttgagtgca gtttataaaa gatgaaaacg 241 tttaatatat cggtcatcgg tctctcgggg actgagaagg accgaggaca agtcggtgtg 301 ggcaaatcat gcttatgtaa cagatttata aggcccatgg ccgatgatta cttcatagat 361 cacatatcag ttttgagtca gagtgacttc agtgggcgag ttgttaataa cgatcacttt 421 ctatattggg gcgatgtgca caagagcacc gacgaaggca ctgaatacac ctttcacatt 481 atcgaacaga ccgaattcat ggacgattcc acattccagc cctttaaggt tggcaaaatg 541 gagacctacc tgaagcgatg caccaccaca aaagtatttt cggccgaaaa actcatgtac 601 atttgcaaga accaattggg aattgagaaa gagtacgaac aaaagatatt gcccgatggc 661 cgattggcca tagatggctt cattgtggtg tttgatgtca gccctgtgcc aaatcgaaat 721 attgaaaaac aggtggaatt tgtacaaaat gcaattactt taatactcaa aaataagaag 781 ccattggttt tggtgaccac caaaaacgac gattcctgtg atctgtacat aagagaggcg 841 gagaagatat gccagcgtaa ggattacaag ggcatgatac agctggtgga gacatcggcc 901 catgaatcca taaatacgga tttggctttt ctgctgctgg ctcaaatgat agacaaagtg 961 aaaaaccgca taaaaatcat tccatatcaa gaagctgcta ggtcgcgcaa agaattgctc 1021 gaaagtcgtt cggaggcagt gacgcgtctt ataagaaatc aaataaccga ttatcatgtc 1081 ctatggacac acggctcaaa aatgcttgct caattcagag aatggacaga atttttgaat 1141 atttttggcc acgatgccgg gcagaagttg tttcgtcgtc acatgaagaa gctgcgtgac 1201 gactatatga atcaaaggct gcatcagtat ttggataaat ttgctcgtac actcgaatac 1261 atgttgccag atgtgaatgc tctctccacc agcgatgatg atatttggga atgtgccaag 1321 ggttatatta gaaaccattt agagtttgac caatactttt tcgaatgtcc ccaggccacg 1381 tggcaggagc tggtggacat ggatgagacg gaagatgagg cgcgtattcc ttttgatgtt 1441 ttagagactt cagaggcaga gacagtgttt aggaattttt tgaattctgt gcaacaggac 1501 aaaaagaaaa taggctggaa acaacaattc aaaatacttt tggaagagtc cggctttgtt 1561 actcccggca agcagttgtc tgaagttcgc gtactcttta tgggtcgtga atgttttgag 1621 gccttgtccg agcatgactg ccagcaaata tatgacatac atcaggatga gataattgag 1681 aagagtaaac aaaattttat tgagttactg ctggagcatg cccaattttt ccaacagttc 1741 aaaaatgtgg atattataac ccaagaagat gtaagacaaa taacagatat actgcaagat 1801 gattccagat acaagattat ggatcgcttg gaccaggaga gacgtgtcat tttattccag 1861 catttaggct ttatgcactg tcccatacgt gaccattgtc cattttacca cagttgtgtt 1921 gacaatttca ttgaagagat cttggccgac aagtccgccg gtagccataa aactctggga 1981 agtggtggca gtggcagctg gaagtcccaa ggttctgata aaactctcaa cttgctcatt 2041 gtgggttctg agcacttggc cagtgatcta cttaatgaca ttcgcatgtg caccggctcc 2101 aaaggcgaat atatatatga gaatcaaaca tattatctta actaccgcat agcgaatgga 2161 gatatggaag cctttaaagc tattgatgtc tattcaagcg gtttgatttg tgtctactca 2221 aatctgcagt cttttgaaac tcttaaggac aatctcgaac gaacactgct ttgcaatttg 2281 gaattagagg ataagtttga aaatcttcca atagtattag tctatcaacc acaagatcta 2341 aaggagaacg aagttgagta tctgagaaat gagggtttgc gtttggccga aatgttgcat 2401 tgcgatttca ttgatcacca gcaaagccat cagaaatatg tctatgaaat tttgaatata 2461 gtcattgatt ctttgcgagt ttccgaaatg aagaccttgg aaacttttcc acccaatcaa 2521 acggatttgc gtattttagt gtgcatgttt tgtggcgatc aatatgacat agaaaatctg 2581 gtaaatcccc ttatagatga atccacattt tgcaaagcaa tggaacattc cgtagttgtg 2641 gacgtcttca taggtgattc caagaaacgt gtggaattta tattgtcatc ataccatggc 2701 ataaatcaat atcgtgatga attgatacat ggttttatat ttgtgtactc caccaaaagg 2761 cgctcttcct tggctaatct tagtgtcttg gtatcgcaaa atgccaatat acctttgcag 2821 attatagcga ttaccgaaag tggaggagct aatgcatttt tcagcagtga actgtgtcaa 2881 tttcttataa ccgaaggtaa ttctttggca gatcgttaca aagcaagctt tatgacattc 2941 tcagcggatc aatatgtaaa atttgctttc tatagtccat ttttgaaaaa tgcttgggat 3001 aacaaatatg atgtagaaaa tctacacgtc gaagagtcaa ttacattgga ttcaggcgag 3061 ggcacacttg agaactcggt taagttgccc agaccaccac cgcgacatga aagctatatg 3121 ttatcgagta ccttaggtac ggatggctcc ggcagcgaaa actacgaaat gcttcctaca 3181 cgttctctaa actcattaaa tgaagaaaga gacatatctt tagatgaaat ctacgaagaa 3241 agcaacgaaa aaccaaaaat ggtccatcag acggatgtaa gcgggtcaaa ggattcattg 3301 gctacccatg atgcagaatg gttggatgat aaaacagatg ggcgacgcaa tataaataaa 3361 aattccattt ggaataattt tggtggctca acgcacgcat atacaactgg tcgtagacat 3421 atagattcta atttgaataa aattcgtcca aaaggtccaa gtcagaccct aaagcaacca 3481 ggaaaattaa atatgaaaaa ttttcagtta gttagcgaag ctgtagcaaa aatgaatttc 3541 ggaggcgatt cctatttgcc tatttgtgag agtggcgata aggactccaa acgttataca 3601 caattcgatc attctcagtt ggatggcgat gaggaggact ctgaggagtt agccgaatat 3661 gaacaaattt atgaaaatga agactgtacc gaatccgata gttgtgctag ttcaatagag 3721 cgtaaaaatc gacaacaaaa tgcctattat aaacaaatca ataaaaagcc acccgtgaac 3781 aaaaagacaa agaagaagaa agttgccata ccggtgcaaa ctcccagagt acctactatg 3841 tttggttcat acgtaagccc accagagata ccattgcatt atcaaagaat ggtaaccgcc 3901 gagaaaaaaa aaattggcga tcccactatt ataaatgata tgataaaaac cgacaaatcg 3961 ccagagtaca ccatggtacc agatgcccct gtcttatttg gcgctcccga aactcttaac 4021 gaatacaaca tgaatgccaa atgtttaaag gaatttgaaa aatctgaaaa gcgtcgccta 4081 aaggaggaaa atactagact acgcaaactg caagaaaagg aaaaggagca agaaaagaag 4141 ctgaaacgta aattaaaaca aaattccaag ggtttccccg acactgaatc tcaatttgaa 4201 aagcttatga tctccgataa agtggaaatt cctatatttt taatcaaatg catagaatat 4261 atagaaaaag aaggtctgga ttccgaaggc atatatagag ttccgggcag tcgtgcccat 4321 gtagacttgt tatttcaaaa gtttgaagaa gattccaata ctgttattga acttttggat 4381 atacctgtca atgccgtggc cacagctctc aaggattttt tctcaaaacg attgcctcca 4441 ttgtttagca aggatataat aaaggaattg gaggaagttg cgggttcacg tacagtgtgc 4501 ggctctaaag tgaatgttga agtaaaaacc gatcgaagtt gtcgtttaat ggctttaaag 4561 acgttattgg aaaaattacc gcctgctaat tttgctatat tgaagtacat atttcagcat 4621 tttgtgcaag tttccgacaa ttccaaactc aatagcatgg atagtaaaaa tttggctata 4681 tgctggtggc ccaccttgat tcctatcgat tttaccgata tgggccattt tgagcaattg 4741 cgtccttacc tagaagatat tgtacaaaca atgattgatc aatatccata tctgttttgt 4801 ggagaagacg cttttgtcat ggtataaatg aacacccagt attttcttta tttaatttgt 4861 cggtatatat ataaatatat gtatgtgtgt ttatgtgtta ttaagttgta aaacaacaac 4921 aaaacaaaaa aagagaaaaa acagcaaaat actttttata gtataaataa tttcgatata 4981 agcgagatga aaggaaagaa aagatcaaaa aaaaaaagaa agaaaaagaa atcgaaagta 5041 attgtgctca cataccaaaa cgtgtgtatt ccggttttga tgagtgcgtg tggtgtaaat 5101 cattgttttt agttgatagt tgatttttaa attattatta taaaaaaaat atgtatttca 5161 ttagttaatt gtactatgta aattgatgtc tccgtgtgtt tgcgcgtgta atcgcgtaag 5221 taaactttag ttgtagtaaa cagaagtgag atttaaaaca acaacagcaa ccacaacaac 5281 cgcaacaaac ccgaataaat aagaaaaaac ttaattaaga agcaaatgga aataaaacaa 5341 atcaagctta aaacttaatt ggcaagccaa aagatagcaa aaaaagaaat tcatacaaat 5401 aaacacaaaa attaaaatta taataacaat gataatgata ataaaacagc cagacataca 5461 tagatagaga acgaagattt gaaacgaagc caatattaat tcataagaag ccaaccgatt 5521 tttatcaaac tccaacatat aatattatgt aggttaattc ctccaccgcc gcctaagttt 5581 taattagcca taatgcgagt tacacgctct cgcattcttg taaactctta ttaattaatg 5641 tgtgcttttt taacaacata tacaaaatca cttatttata aattgaatat attggaaaaa 5701 aacgtattgt caatttgtat tactttccta catacatgta tagagttttt ttctatgaca 5761 tttacatcaa cttctacttc aaaactatct atctagaatt tctcttaaag atcaaatgtt 5821 tgcactaaag agattttttt gttttatttt taccagttgt tatcaccata gcaaaaattt 5881 aaacttaccc tacatatctt cttgagggaa tgaatgcaca acaacaacaa caataaacaa 5941 tgtatgtatg tatattttgt aataggaaaa cagcttatct taggaacaga agctatttat 6001 tccgaaagtt tgtctcactc tctctctcta ttgtgaattg aaatttattt tgtgacctgt 6061 tactcttgct attgtacttt ttacaaaact cactgttatt gtttctcaat atttaactct 6121 cctctcacaa ctaccaaaag tagcaaatag agctaaggaa tacctatttg gactttttat 6181 taaaaatgca tcagtgacgg ttttaataat tttattgaaa taaaattaaa atattttttt 6241 atcttcagca gaatattgga gagattactt tattgaattt ttggtatttg tgtaaacatt 6301 gtcccctaac caccaaaaag gtgaaaatat tcagtaaaaa aaacaactct tgcgtccata 6361 cagttttcta aatgtaaaat aaaaaatgac attacgatat aaaggcgggt tatacggctg 6421 tttagacgtt tagatttatt agtcatatat gactacaacc cagcaaaatt aataattaat 6481 tagttatacc ctccaccatg ggatggggta tactaatttt gtcattctgt ttgtcctcgt 6541 aatattcctc tcagactcca taatgtatat acattcttga gtcatgtcaa tttaagtcga 6601 tctagccatg tccgtccgtc tgtctgtcga aagcacgcta tctttcgaag gagtaaagct 6661 agccgcttga aattttgata tagctgccat ataaccagac ttcttgagcc tctagaggcc 6721 gcaattctta tctgttttgg ctgaaatttt gcacgacgtg ttaggttatg atttcgaaga 6781 actgtgctca gcatggtcta aatctcaaaa ttttacacaa ttacctcact atggtgtcca 6841 acattcaatt caattatggg ccgaatcgga ccataactta atatagctcc aatattatag 6901 caattccttt cttttatcct ttgtttgcca aaaaagagat attgggaaaa gaactcgaca 6961 aatgcgatct atggtggagg ttttataaga tttgacccgg ccgaacttag cacgctttta 7021 cttgtttcaa atagtttttg gccaaacgtt gccatgctgg atgatactga tcccaccaaa 7081 tatagaacat tatcttttcg tcatggacat atggcctagg cgctgattta gctggctggc 7141 tggctttcgt tgtgtatcaa atttgcatca ttatttctgt atggttcaag ctgcatttcc 7201 gatatgcaaa atcacctttc aatgtctctg attgtatcgt aatctcaggc atagccctct 7261 aatcaggcat agccgtagcc ctctatcgta atctcaggca taaccgtagc cctctaatcc 7321 ctctgttcat tgcgcaaacc acaatttttt ttttgagttg gtgcatgttt accagctgtt 7381 ttctaaaatg cggaaagtta ccagacttca ctgtaaaata tttaatttaa cattatgacc 7441 cttacaaatt tcattttatt atttgctgtt ttattttagt actggataca caagccgtga 7501 aagacacaaa taaaacgcaa aaatgtgtcc tggtagtagc gttttcccac ctgtcaaata 7561 ggaataagga aaaacgtaaa aatattttaa aaatgtataa aataaaattt atttttttct 7621 gccattcata atagagttat ttctgcgggt ggccatattt aattgtgaaa aacatatcag 7681 ggcaattctg aaggcagatt tcctttgatt tttcgttgta ctggataggt gttatttcca 7741 tacaattttc gctgtactgc actgtatagt actaaaataa aacaaggaaa tttatgccat 7801 atattgtcta aatccggata tttaaatttt ataatttaaa tttattgttg tttttatttt 7861 ggtttcccct ttttaatact tatgtcatct ctatagcgaa ttttttatct attttaatac 7921 tcatagactt ttttaatatt tttttaacta tatttgtttt tttaatttct ttaagtttat 7981 tttatataat tttttgtttt tttagtttat tatttttttt cagagcctcg tattttttta 8041 attttcatgc ccacttgact ccattttttt taagaaaaaa tacagttatg tggtccatat 8101 atgttttcct tagaactctt cgaatgtatt ttctaaacaa aacaaaaaca aacacaaaat 8161 aatgttttat aaaaatgcta aaaattcgtg taataaatta aaatgctatt aagttaaaca 8221 aaaaaacaaa catattataa aaggtgttat ttctaaaaaa atgaataaaa aaagaaaacg 8281 aaaacgaaaa catgcataaa tgtattaacg aaacaaatga ttgcataatt tatatgaact 8341 tctctatatg tgtaatgtgt ctaaaacgca ccataatctt cctgatttaa atataaaata 8401 ataataatta taataatatg tattattatt agtaattaaa aacaaatagg tattacaaat 8461 aataagatat tttataaaat gacgaaacaa aaacaacaat ttagtgtaat ttgtatgtat 8521 aatgtcagtg tctatgtgtc tattgcataa acaaccaatt attaaataac taatattaat 8581 attaatatta tatatatata ttatattata tatttactac tgattaacgt gatgtggtgt 8641 attgatattt ttaaaaacga acccaaaaaa aagaagcgaa aaattaaaaa aaaaatacga 8701 aagcaaattg atattaacgg tcatttctga tattcatata cacacactca tgcatataca 8761 tgcgtggcat ttgtgtatgc gttcgtgtac taaggtaaaa caaaagaaac aaacataaca 8821 aaaaaaaaaa aacgaccgtc gtatatgagg agtaaaaacc aagaagaagt aaagaaataa 8881 aataattttg aaataactgt gcaaaa