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LOCUS XM_013247231 8893 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X4, mRNA. ACCESSION XM_013247231 VERSION XM_013247231.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247231.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8893 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8893 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083916" CDS 93..4814 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X1" /protein_id="XP_013102685.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQRFQIFPPPTTPPEPAPP DHQLITCSYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLDDKTDGRRNINKNSI WNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNMKNFQLVSEAVAKMNFG GDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQIYENEDCTESDSCASSI ERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMFGSYVSPPEIPLHYQRM VTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETLNEYNMNAKCLKEFEKS EKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTESQFEKLMISDKVEIPIF LIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTVIELLDIPVNAVATALK DFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRSCRLMALKTLLEKLPPA NFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDI VQTMIDQYPYLFCGEDAFVMV" misc_feature 147..170 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(153..173,480..482,660..665,681..683,756..764) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 309..311 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 321..329 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <534..812 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(660..665,678..683) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 756..764 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 852..1091 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1758..>2957 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4212..4781 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4284..4286,4398..4400,4410..4412,4656..4658, 4665..4670,4752..4754) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4284..4286 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 8893 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aattgaatag aagtgcaaat gcctgcttgc ttgcaaatta catgtatata agtacataca 61 tatattcata cacatatata gaagtataaa agatgaaaac gtttaatata tcggtcatcg 121 gtctctcggg gactgagaag gaccgaggac aagtcggtgt gggcaaatca tgcttatgta 181 acagatttat aaggcccatg gccgatgatt acttcataga tcacatatca gttttgagtc 241 agagtgactt cagtgggcga gttgttaata acgatcactt tctatattgg ggcgatgtgc 301 acaagagcac cgacgaaggc actgaataca cctttcacat tatcgaacag accgaattca 361 tggacgattc cacattccag ccctttaagg ttggcaaaat ggagacctac ctgaagcgat 421 gcaccaccac aaaagtattt tcggccgaaa aactcatgta catttgcaag aaccaattgg 481 gaattgagaa agagtacgaa caaaagatat tgcccgatgg ccgattggcc atagatggct 541 tcattgtggt gtttgatgtc agccctgtgc caaatcgaaa tattgaaaaa caggtggaat 601 ttgtacaaaa tgcaattact ttaatactca aaaataagaa gccattggtt ttggtgacca 661 ccaaaaacga cgattcctgt gatctgtaca taagagaggc ggagaagata tgccagcgta 721 aggattacaa gggcatgata cagctggtgg agacatcggc ccatgaatcc ataaatacgg 781 atttggcttt tctgctgctg gctcaaatga tagacaaagt gaaaaaccgc ataaaaatca 841 ttccatatca agaagctgct aggtcgcgca aagaattgct cgaaagtcgt tcggaggcag 901 tgacgcgtct tataagaaat caaataaccg attatcatgt cctatggaca cacggctcaa 961 aaatgcttgc tcaattcaga gaatggacag aatttttgaa tatttttggc cacgatgccg 1021 ggcagaagtt gtttcgtcgt cacatgaaga agctgcgtga cgactatatg aatcaaaggc 1081 tgcatcagta tttggataaa tttgctcgta cactcgaata catgttgcca gatgtgaatg 1141 ctctctccac cagcgatgat gatatttggg aatgtgccaa gggttatatt agaaaccatt 1201 tagagtttga ccaatacttt ttcgaatgtc cccaggccac gtggcaggag ctggtggaca 1261 tggatgagac ggaagatgag gcgcgtattc cttttgatgt tttagagact tcagaggcag 1321 agacagtgtt taggaatttt ttgaattctg tgcaacagga caaaaagaaa ataggctgga 1381 aacaacaatt caaaatactt ttggaagagt ccggctttgt tactcccggc aagcagttgt 1441 ctgaagttcg cgtactcttt atgggtcgtg aatgttttga ggccttgtcc gagcatgact 1501 gccagcaaat atatgacata catcaggatg agataattga gaagagtaaa caaaatttta 1561 ttgagttact gctggagcat gcccaatttt tccaacagtt caaaaatgtg gatattataa 1621 cccaagaaga tgtaagacaa ataacagata tactgcaaga tgattccaga tacaagatta 1681 tggatcgctt ggaccaggag agacgtgtca ttttattcca gcatttaggc tttatgcact 1741 gtcccatacg tgaccattgt ccattttacc acagttgtgt tgacaatttc attgaagaga 1801 tcttggccga caagtccgcc ggtagccata aaactctggg aagtggtggc agtggcagct 1861 ggaagtccca aggttctgat aaaactctca acttgctcat tgtgggttct gagcacttgg 1921 ccagtgatct acttaatgac attcgcatgt gcaccggctc caaaggcgaa tatatatatg 1981 agaatcaaac atattatctt aactaccgca tagcgaatgg agatatggaa gcctttaaag 2041 ctattgatgt ctattcaagc ggtttgattt gtgtctactc aaatctgcag tcttttgaaa 2101 ctcttaagga caatctcgaa cgaacactgc tttgcaattt ggaattagag gataagtttg 2161 aaaatcttcc aatagtatta gtctatcaac cacaagatct aaaggagaac gaagttgagt 2221 atctgagaaa tgagggtttg cgtttggccg aaatgttgca ttgcgatttc attgatcacc 2281 agcaaagcca tcagaaatat gtctatgaaa ttttgaatat agtcattgat tctttgcgag 2341 tttccgaaat gaagaccttg gaaacttttc cacccaatca aacggatttg cgtattttag 2401 tgtgcatgtt ttgtggcgat caatatgaca tagaaaatct ggtaaatccc cttatagatg 2461 aatccacatt ttgcaaagca atggaacatt ccgtagttgt ggacgtcttc ataggtgatt 2521 ccaagaaacg tgtggaattt atattgtcat cataccatgg cataaatcaa tatcgtgatg 2581 aattgataca tggttttata tttgtgtact ccaccaaaag gcgctcttcc ttggctaatc 2641 ttagtgtctt ggtatcgcaa aatgccaata tacctttgca gattatagcg attaccgaaa 2701 gtggaggagc taatgcattt ttcagcagtg aactgtgtca atttcttata accgaaggta 2761 attctttggc agatcgttac aaagcaagct ttatgacatt ctcagcggat caatatgtaa 2821 aatttgcttt ctatagtcca tttttgaaaa atgcttggga taacaaatat gatgtagaaa 2881 atctacacgt cgaagagtca attacattgg attcaggcga gggcacactt gagaactcgg 2941 ttaagttgcc cagaccacca ccgcgacatg aaagctatat gttatcgagt accttaggta 3001 cggatggctc cggcagcgaa aactacgaaa tgcttcctac acgttctcta aactcattaa 3061 atgaagaaag agacatatct ttagatgaaa tctacgaaga aagcaacgaa aaaccaaaaa 3121 tggtccatca gagattccag atatttccac ctccaacaac tcctccagag ccagctcctc 3181 cagatcatca gctcattaca tgctcatata agagccaatt tgtttcagct tccgagtcta 3241 gtttggaaga aataacatcg gatgtaagcg ggtcaaagga ttcattggct acccatgatg 3301 cagaatggtt ggatgataaa acagatgggc gacgcaatat aaataaaaat tccatttgga 3361 ataattttgg tggctcaacg cacgcatata caactggtcg tagacatata gattctaatt 3421 tgaataaaat tcgtccaaaa ggtccaagtc agaccctaaa gcaaccagga aaattaaata 3481 tgaaaaattt tcagttagtt agcgaagctg tagcaaaaat gaatttcgga ggcgattcct 3541 atttgcctat ttgtgagagt ggcgataagg actccaaacg ttatacacaa ttcgatcatt 3601 ctcagttgga tggcgatgag gaggactctg aggagttagc cgaatatgaa caaatttatg 3661 aaaatgaaga ctgtaccgaa tccgatagtt gtgctagttc aatagagcgt aaaaatcgac 3721 aacaaaatgc ctattataaa caaatcaata aaaagccacc cgtgaacaaa aagacaaaga 3781 agaagaaagt tgccataccg gtgcaaactc ccagagtacc tactatgttt ggttcatacg 3841 taagcccacc agagatacca ttgcattatc aaagaatggt aaccgccgag aaaaaaaaaa 3901 ttggcgatcc cactattata aatgatatga taaaaaccga caaatcgcca gagtacacca 3961 tggtaccaga tgcccctgtc ttatttggcg ctcccgaaac tcttaacgaa tacaacatga 4021 atgccaaatg tttaaaggaa tttgaaaaat ctgaaaagcg tcgcctaaag gaggaaaata 4081 ctagactacg caaactgcaa gaaaaggaaa aggagcaaga aaagaagctg aaacgtaaat 4141 taaaacaaaa ttccaagggt ttccccgaca ctgaatctca atttgaaaag cttatgatct 4201 ccgataaagt ggaaattcct atatttttaa tcaaatgcat agaatatata gaaaaagaag 4261 gtctggattc cgaaggcata tatagagttc cgggcagtcg tgcccatgta gacttgttat 4321 ttcaaaagtt tgaagaagat tccaatactg ttattgaact tttggatata cctgtcaatg 4381 ccgtggccac agctctcaag gattttttct caaaacgatt gcctccattg tttagcaagg 4441 atataataaa ggaattggag gaagttgcgg gttcacgtac agtgtgcggc tctaaagtga 4501 atgttgaagt aaaaaccgat cgaagttgtc gtttaatggc tttaaagacg ttattggaaa 4561 aattaccgcc tgctaatttt gctatattga agtacatatt tcagcatttt gtgcaagttt 4621 ccgacaattc caaactcaat agcatggata gtaaaaattt ggctatatgc tggtggccca 4681 ccttgattcc tatcgatttt accgatatgg gccattttga gcaattgcgt ccttacctag 4741 aagatattgt acaaacaatg attgatcaat atccatatct gttttgtgga gaagacgctt 4801 ttgtcatggt ataaatgaac acccagtatt ttctttattt aatttgtcgg tatatatata 4861 aatatatgta tgtgtgttta tgtgttatta agttgtaaaa caacaacaaa acaaaaaaag 4921 agaaaaaaca gcaaaatact ttttatagta taaataattt cgatataagc gagatgaaag 4981 gaaagaaaag atcaaaaaaa aaaagaaaga aaaagaaatc gaaagtaatt gtgctcacat 5041 accaaaacgt gtgtattccg gttttgatga gtgcgtgtgg tgtaaatcat tgtttttagt 5101 tgatagttga tttttaaatt attattataa aaaaaatatg tatttcatta gttaattgta 5161 ctatgtaaat tgatgtctcc gtgtgtttgc gcgtgtaatc gcgtaagtaa actttagttg 5221 tagtaaacag aagtgagatt taaaacaaca acagcaacca caacaaccgc aacaaacccg 5281 aataaataag aaaaaactta attaagaagc aaatggaaat aaaacaaatc aagcttaaaa 5341 cttaattggc aagccaaaag atagcaaaaa aagaaattca tacaaataaa cacaaaaatt 5401 aaaattataa taacaatgat aatgataata aaacagccag acatacatag atagagaacg 5461 aagatttgaa acgaagccaa tattaattca taagaagcca accgattttt atcaaactcc 5521 aacatataat attatgtagg ttaattcctc caccgccgcc taagttttaa ttagccataa 5581 tgcgagttac acgctctcgc attcttgtaa actcttatta attaatgtgt gcttttttaa 5641 caacatatac aaaatcactt atttataaat tgaatatatt ggaaaaaaac gtattgtcaa 5701 tttgtattac tttcctacat acatgtatag agtttttttc tatgacattt acatcaactt 5761 ctacttcaaa actatctatc tagaatttct cttaaagatc aaatgtttgc actaaagaga 5821 tttttttgtt ttatttttac cagttgttat caccatagca aaaatttaaa cttaccctac 5881 atatcttctt gagggaatga atgcacaaca acaacaacaa taaacaatgt atgtatgtat 5941 attttgtaat aggaaaacag cttatcttag gaacagaagc tatttattcc gaaagtttgt 6001 ctcactctct ctctctattg tgaattgaaa tttattttgt gacctgttac tcttgctatt 6061 gtacttttta caaaactcac tgttattgtt tctcaatatt taactctcct ctcacaacta 6121 ccaaaagtag caaatagagc taaggaatac ctatttggac tttttattaa aaatgcatca 6181 gtgacggttt taataatttt attgaaataa aattaaaata tttttttatc ttcagcagaa 6241 tattggagag attactttat tgaatttttg gtatttgtgt aaacattgtc ccctaaccac 6301 caaaaaggtg aaaatattca gtaaaaaaaa caactcttgc gtccatacag ttttctaaat 6361 gtaaaataaa aaatgacatt acgatataaa ggcgggttat acggctgttt agacgtttag 6421 atttattagt catatatgac tacaacccag caaaattaat aattaattag ttataccctc 6481 caccatggga tggggtatac taattttgtc attctgtttg tcctcgtaat attcctctca 6541 gactccataa tgtatataca ttcttgagtc atgtcaattt aagtcgatct agccatgtcc 6601 gtccgtctgt ctgtcgaaag cacgctatct ttcgaaggag taaagctagc cgcttgaaat 6661 tttgatatag ctgccatata accagacttc ttgagcctct agaggccgca attcttatct 6721 gttttggctg aaattttgca cgacgtgtta ggttatgatt tcgaagaact gtgctcagca 6781 tggtctaaat ctcaaaattt tacacaatta cctcactatg gtgtccaaca ttcaattcaa 6841 ttatgggccg aatcggacca taacttaata tagctccaat attatagcaa ttcctttctt 6901 ttatcctttg tttgccaaaa aagagatatt gggaaaagaa ctcgacaaat gcgatctatg 6961 gtggaggttt tataagattt gacccggccg aacttagcac gcttttactt gtttcaaata 7021 gtttttggcc aaacgttgcc atgctggatg atactgatcc caccaaatat agaacattat 7081 cttttcgtca tggacatatg gcctaggcgc tgatttagct ggctggctgg ctttcgttgt 7141 gtatcaaatt tgcatcatta tttctgtatg gttcaagctg catttccgat atgcaaaatc 7201 acctttcaat gtctctgatt gtatcgtaat ctcaggcata gccctctaat caggcatagc 7261 cgtagccctc tatcgtaatc tcaggcataa ccgtagccct ctaatccctc tgttcattgc 7321 gcaaaccaca attttttttt tgagttggtg catgtttacc agctgttttc taaaatgcgg 7381 aaagttacca gacttcactg taaaatattt aatttaacat tatgaccctt acaaatttca 7441 ttttattatt tgctgtttta ttttagtact ggatacacaa gccgtgaaag acacaaataa 7501 aacgcaaaaa tgtgtcctgg tagtagcgtt ttcccacctg tcaaatagga ataaggaaaa 7561 acgtaaaaat attttaaaaa tgtataaaat aaaatttatt tttttctgcc attcataata 7621 gagttatttc tgcgggtggc catatttaat tgtgaaaaac atatcagggc aattctgaag 7681 gcagatttcc tttgattttt cgttgtactg gataggtgtt atttccatac aattttcgct 7741 gtactgcact gtatagtact aaaataaaac aaggaaattt atgccatata ttgtctaaat 7801 ccggatattt aaattttata atttaaattt attgttgttt ttattttggt ttcccctttt 7861 taatacttat gtcatctcta tagcgaattt tttatctatt ttaatactca tagacttttt 7921 taatattttt ttaactatat ttgttttttt aatttcttta agtttatttt atataatttt 7981 ttgttttttt agtttattat tttttttcag agcctcgtat ttttttaatt ttcatgccca 8041 cttgactcca ttttttttaa gaaaaaatac agttatgtgg tccatatatg ttttccttag 8101 aactcttcga atgtattttc taaacaaaac aaaaacaaac acaaaataat gttttataaa 8161 aatgctaaaa attcgtgtaa taaattaaaa tgctattaag ttaaacaaaa aaacaaacat 8221 attataaaag gtgttatttc taaaaaaatg aataaaaaaa gaaaacgaaa acgaaaacat 8281 gcataaatgt attaacgaaa caaatgattg cataatttat atgaacttct ctatatgtgt 8341 aatgtgtcta aaacgcacca taatcttcct gatttaaata taaaataata ataattataa 8401 taatatgtat tattattagt aattaaaaac aaataggtat tacaaataat aagatatttt 8461 ataaaatgac gaaacaaaaa caacaattta gtgtaatttg tatgtataat gtcagtgtct 8521 atgtgtctat tgcataaaca accaattatt aaataactaa tattaatatt aatattatat 8581 atatatatta tattatatat ttactactga ttaacgtgat gtggtgtatt gatattttta 8641 aaaacgaacc caaaaaaaag aagcgaaaaa ttaaaaaaaa aatacgaaag caaattgata 8701 ttaacggtca tttctgatat tcatatacac acactcatgc atatacatgc gtggcatttg 8761 tgtatgcgtt cgtgtactaa ggtaaaacaa aagaaacaaa cataacaaaa aaaaaaaaac 8821 gaccgtcgta tatgaggagt aaaaaccaag aagaagtaaa gaaataaaat aattttgaaa 8881 taactgtgca aaa