Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013247230 8954 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X2, mRNA. ACCESSION XM_013247230 VERSION XM_013247230.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247230.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8954 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8954 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083916" CDS 154..4875 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X1" /protein_id="XP_013102684.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQRFQIFPPPTTPPEPAPP DHQLITCSYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLDDKTDGRRNINKNSI WNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNMKNFQLVSEAVAKMNFG GDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQIYENEDCTESDSCASSI ERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMFGSYVSPPEIPLHYQRM VTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETLNEYNMNAKCLKEFEKS EKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTESQFEKLMISDKVEIPIF LIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTVIELLDIPVNAVATALK DFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRSCRLMALKTLLEKLPPA NFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDI VQTMIDQYPYLFCGEDAFVMV" misc_feature 208..231 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(214..234,541..543,721..726,742..744,817..825) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 370..372 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 382..390 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <595..873 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(721..726,739..744) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 817..825 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 913..1152 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1819..>3018 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4273..4842 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4345..4347,4459..4461,4471..4473,4717..4719, 4726..4731,4813..4815) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4345..4347 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 8954 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aggacagaga agaaacattt tttttctgta tgtgtataga atttttgtta aaaatgtttc 61 attcaatatt ttcacttaaa aactcctcaa aactgttgaa tgcttgaaca aaatcaaaaa 121 atgtttgaat tgtgcaaaaa attgacataa aagatgaaaa cgtttaatat atcggtcatc 181 ggtctctcgg ggactgagaa ggaccgagga caagtcggtg tgggcaaatc atgcttatgt 241 aacagattta taaggcccat ggccgatgat tacttcatag atcacatatc agttttgagt 301 cagagtgact tcagtgggcg agttgttaat aacgatcact ttctatattg gggcgatgtg 361 cacaagagca ccgacgaagg cactgaatac acctttcaca ttatcgaaca gaccgaattc 421 atggacgatt ccacattcca gccctttaag gttggcaaaa tggagaccta cctgaagcga 481 tgcaccacca caaaagtatt ttcggccgaa aaactcatgt acatttgcaa gaaccaattg 541 ggaattgaga aagagtacga acaaaagata ttgcccgatg gccgattggc catagatggc 601 ttcattgtgg tgtttgatgt cagccctgtg ccaaatcgaa atattgaaaa acaggtggaa 661 tttgtacaaa atgcaattac tttaatactc aaaaataaga agccattggt tttggtgacc 721 accaaaaacg acgattcctg tgatctgtac ataagagagg cggagaagat atgccagcgt 781 aaggattaca agggcatgat acagctggtg gagacatcgg cccatgaatc cataaatacg 841 gatttggctt ttctgctgct ggctcaaatg atagacaaag tgaaaaaccg cataaaaatc 901 attccatatc aagaagctgc taggtcgcgc aaagaattgc tcgaaagtcg ttcggaggca 961 gtgacgcgtc ttataagaaa tcaaataacc gattatcatg tcctatggac acacggctca 1021 aaaatgcttg ctcaattcag agaatggaca gaatttttga atatttttgg ccacgatgcc 1081 gggcagaagt tgtttcgtcg tcacatgaag aagctgcgtg acgactatat gaatcaaagg 1141 ctgcatcagt atttggataa atttgctcgt acactcgaat acatgttgcc agatgtgaat 1201 gctctctcca ccagcgatga tgatatttgg gaatgtgcca agggttatat tagaaaccat 1261 ttagagtttg accaatactt tttcgaatgt ccccaggcca cgtggcagga gctggtggac 1321 atggatgaga cggaagatga ggcgcgtatt ccttttgatg ttttagagac ttcagaggca 1381 gagacagtgt ttaggaattt tttgaattct gtgcaacagg acaaaaagaa aataggctgg 1441 aaacaacaat tcaaaatact tttggaagag tccggctttg ttactcccgg caagcagttg 1501 tctgaagttc gcgtactctt tatgggtcgt gaatgttttg aggccttgtc cgagcatgac 1561 tgccagcaaa tatatgacat acatcaggat gagataattg agaagagtaa acaaaatttt 1621 attgagttac tgctggagca tgcccaattt ttccaacagt tcaaaaatgt ggatattata 1681 acccaagaag atgtaagaca aataacagat atactgcaag atgattccag atacaagatt 1741 atggatcgct tggaccagga gagacgtgtc attttattcc agcatttagg ctttatgcac 1801 tgtcccatac gtgaccattg tccattttac cacagttgtg ttgacaattt cattgaagag 1861 atcttggccg acaagtccgc cggtagccat aaaactctgg gaagtggtgg cagtggcagc 1921 tggaagtccc aaggttctga taaaactctc aacttgctca ttgtgggttc tgagcacttg 1981 gccagtgatc tacttaatga cattcgcatg tgcaccggct ccaaaggcga atatatatat 2041 gagaatcaaa catattatct taactaccgc atagcgaatg gagatatgga agcctttaaa 2101 gctattgatg tctattcaag cggtttgatt tgtgtctact caaatctgca gtcttttgaa 2161 actcttaagg acaatctcga acgaacactg ctttgcaatt tggaattaga ggataagttt 2221 gaaaatcttc caatagtatt agtctatcaa ccacaagatc taaaggagaa cgaagttgag 2281 tatctgagaa atgagggttt gcgtttggcc gaaatgttgc attgcgattt cattgatcac 2341 cagcaaagcc atcagaaata tgtctatgaa attttgaata tagtcattga ttctttgcga 2401 gtttccgaaa tgaagacctt ggaaactttt ccacccaatc aaacggattt gcgtatttta 2461 gtgtgcatgt tttgtggcga tcaatatgac atagaaaatc tggtaaatcc ccttatagat 2521 gaatccacat tttgcaaagc aatggaacat tccgtagttg tggacgtctt cataggtgat 2581 tccaagaaac gtgtggaatt tatattgtca tcataccatg gcataaatca atatcgtgat 2641 gaattgatac atggttttat atttgtgtac tccaccaaaa ggcgctcttc cttggctaat 2701 cttagtgtct tggtatcgca aaatgccaat atacctttgc agattatagc gattaccgaa 2761 agtggaggag ctaatgcatt tttcagcagt gaactgtgtc aatttcttat aaccgaaggt 2821 aattctttgg cagatcgtta caaagcaagc tttatgacat tctcagcgga tcaatatgta 2881 aaatttgctt tctatagtcc atttttgaaa aatgcttggg ataacaaata tgatgtagaa 2941 aatctacacg tcgaagagtc aattacattg gattcaggcg agggcacact tgagaactcg 3001 gttaagttgc ccagaccacc accgcgacat gaaagctata tgttatcgag taccttaggt 3061 acggatggct ccggcagcga aaactacgaa atgcttccta cacgttctct aaactcatta 3121 aatgaagaaa gagacatatc tttagatgaa atctacgaag aaagcaacga aaaaccaaaa 3181 atggtccatc agagattcca gatatttcca cctccaacaa ctcctccaga gccagctcct 3241 ccagatcatc agctcattac atgctcatat aagagccaat ttgtttcagc ttccgagtct 3301 agtttggaag aaataacatc ggatgtaagc gggtcaaagg attcattggc tacccatgat 3361 gcagaatggt tggatgataa aacagatggg cgacgcaata taaataaaaa ttccatttgg 3421 aataattttg gtggctcaac gcacgcatat acaactggtc gtagacatat agattctaat 3481 ttgaataaaa ttcgtccaaa aggtccaagt cagaccctaa agcaaccagg aaaattaaat 3541 atgaaaaatt ttcagttagt tagcgaagct gtagcaaaaa tgaatttcgg aggcgattcc 3601 tatttgccta tttgtgagag tggcgataag gactccaaac gttatacaca attcgatcat 3661 tctcagttgg atggcgatga ggaggactct gaggagttag ccgaatatga acaaatttat 3721 gaaaatgaag actgtaccga atccgatagt tgtgctagtt caatagagcg taaaaatcga 3781 caacaaaatg cctattataa acaaatcaat aaaaagccac ccgtgaacaa aaagacaaag 3841 aagaagaaag ttgccatacc ggtgcaaact cccagagtac ctactatgtt tggttcatac 3901 gtaagcccac cagagatacc attgcattat caaagaatgg taaccgccga gaaaaaaaaa 3961 attggcgatc ccactattat aaatgatatg ataaaaaccg acaaatcgcc agagtacacc 4021 atggtaccag atgcccctgt cttatttggc gctcccgaaa ctcttaacga atacaacatg 4081 aatgccaaat gtttaaagga atttgaaaaa tctgaaaagc gtcgcctaaa ggaggaaaat 4141 actagactac gcaaactgca agaaaaggaa aaggagcaag aaaagaagct gaaacgtaaa 4201 ttaaaacaaa attccaaggg tttccccgac actgaatctc aatttgaaaa gcttatgatc 4261 tccgataaag tggaaattcc tatattttta atcaaatgca tagaatatat agaaaaagaa 4321 ggtctggatt ccgaaggcat atatagagtt ccgggcagtc gtgcccatgt agacttgtta 4381 tttcaaaagt ttgaagaaga ttccaatact gttattgaac ttttggatat acctgtcaat 4441 gccgtggcca cagctctcaa ggattttttc tcaaaacgat tgcctccatt gtttagcaag 4501 gatataataa aggaattgga ggaagttgcg ggttcacgta cagtgtgcgg ctctaaagtg 4561 aatgttgaag taaaaaccga tcgaagttgt cgtttaatgg ctttaaagac gttattggaa 4621 aaattaccgc ctgctaattt tgctatattg aagtacatat ttcagcattt tgtgcaagtt 4681 tccgacaatt ccaaactcaa tagcatggat agtaaaaatt tggctatatg ctggtggccc 4741 accttgattc ctatcgattt taccgatatg ggccattttg agcaattgcg tccttaccta 4801 gaagatattg tacaaacaat gattgatcaa tatccatatc tgttttgtgg agaagacgct 4861 tttgtcatgg tataaatgaa cacccagtat tttctttatt taatttgtcg gtatatatat 4921 aaatatatgt atgtgtgttt atgtgttatt aagttgtaaa acaacaacaa aacaaaaaaa 4981 gagaaaaaac agcaaaatac tttttatagt ataaataatt tcgatataag cgagatgaaa 5041 ggaaagaaaa gatcaaaaaa aaaaagaaag aaaaagaaat cgaaagtaat tgtgctcaca 5101 taccaaaacg tgtgtattcc ggttttgatg agtgcgtgtg gtgtaaatca ttgtttttag 5161 ttgatagttg atttttaaat tattattata aaaaaaatat gtatttcatt agttaattgt 5221 actatgtaaa ttgatgtctc cgtgtgtttg cgcgtgtaat cgcgtaagta aactttagtt 5281 gtagtaaaca gaagtgagat ttaaaacaac aacagcaacc acaacaaccg caacaaaccc 5341 gaataaataa gaaaaaactt aattaagaag caaatggaaa taaaacaaat caagcttaaa 5401 acttaattgg caagccaaaa gatagcaaaa aaagaaattc atacaaataa acacaaaaat 5461 taaaattata ataacaatga taatgataat aaaacagcca gacatacata gatagagaac 5521 gaagatttga aacgaagcca atattaattc ataagaagcc aaccgatttt tatcaaactc 5581 caacatataa tattatgtag gttaattcct ccaccgccgc ctaagtttta attagccata 5641 atgcgagtta cacgctctcg cattcttgta aactcttatt aattaatgtg tgctttttta 5701 acaacatata caaaatcact tatttataaa ttgaatatat tggaaaaaaa cgtattgtca 5761 atttgtatta ctttcctaca tacatgtata gagttttttt ctatgacatt tacatcaact 5821 tctacttcaa aactatctat ctagaatttc tcttaaagat caaatgtttg cactaaagag 5881 atttttttgt tttattttta ccagttgtta tcaccatagc aaaaatttaa acttacccta 5941 catatcttct tgagggaatg aatgcacaac aacaacaaca ataaacaatg tatgtatgta 6001 tattttgtaa taggaaaaca gcttatctta ggaacagaag ctatttattc cgaaagtttg 6061 tctcactctc tctctctatt gtgaattgaa atttattttg tgacctgtta ctcttgctat 6121 tgtacttttt acaaaactca ctgttattgt ttctcaatat ttaactctcc tctcacaact 6181 accaaaagta gcaaatagag ctaaggaata cctatttgga ctttttatta aaaatgcatc 6241 agtgacggtt ttaataattt tattgaaata aaattaaaat atttttttat cttcagcaga 6301 atattggaga gattacttta ttgaattttt ggtatttgtg taaacattgt cccctaacca 6361 ccaaaaaggt gaaaatattc agtaaaaaaa acaactcttg cgtccataca gttttctaaa 6421 tgtaaaataa aaaatgacat tacgatataa aggcgggtta tacggctgtt tagacgttta 6481 gatttattag tcatatatga ctacaaccca gcaaaattaa taattaatta gttataccct 6541 ccaccatggg atggggtata ctaattttgt cattctgttt gtcctcgtaa tattcctctc 6601 agactccata atgtatatac attcttgagt catgtcaatt taagtcgatc tagccatgtc 6661 cgtccgtctg tctgtcgaaa gcacgctatc tttcgaagga gtaaagctag ccgcttgaaa 6721 ttttgatata gctgccatat aaccagactt cttgagcctc tagaggccgc aattcttatc 6781 tgttttggct gaaattttgc acgacgtgtt aggttatgat ttcgaagaac tgtgctcagc 6841 atggtctaaa tctcaaaatt ttacacaatt acctcactat ggtgtccaac attcaattca 6901 attatgggcc gaatcggacc ataacttaat atagctccaa tattatagca attcctttct 6961 tttatccttt gtttgccaaa aaagagatat tgggaaaaga actcgacaaa tgcgatctat 7021 ggtggaggtt ttataagatt tgacccggcc gaacttagca cgcttttact tgtttcaaat 7081 agtttttggc caaacgttgc catgctggat gatactgatc ccaccaaata tagaacatta 7141 tcttttcgtc atggacatat ggcctaggcg ctgatttagc tggctggctg gctttcgttg 7201 tgtatcaaat ttgcatcatt atttctgtat ggttcaagct gcatttccga tatgcaaaat 7261 cacctttcaa tgtctctgat tgtatcgtaa tctcaggcat agccctctaa tcaggcatag 7321 ccgtagccct ctatcgtaat ctcaggcata accgtagccc tctaatccct ctgttcattg 7381 cgcaaaccac aatttttttt ttgagttggt gcatgtttac cagctgtttt ctaaaatgcg 7441 gaaagttacc agacttcact gtaaaatatt taatttaaca ttatgaccct tacaaatttc 7501 attttattat ttgctgtttt attttagtac tggatacaca agccgtgaaa gacacaaata 7561 aaacgcaaaa atgtgtcctg gtagtagcgt tttcccacct gtcaaatagg aataaggaaa 7621 aacgtaaaaa tattttaaaa atgtataaaa taaaatttat ttttttctgc cattcataat 7681 agagttattt ctgcgggtgg ccatatttaa ttgtgaaaaa catatcaggg caattctgaa 7741 ggcagatttc ctttgatttt tcgttgtact ggataggtgt tatttccata caattttcgc 7801 tgtactgcac tgtatagtac taaaataaaa caaggaaatt tatgccatat attgtctaaa 7861 tccggatatt taaattttat aatttaaatt tattgttgtt tttattttgg tttccccttt 7921 ttaatactta tgtcatctct atagcgaatt ttttatctat tttaatactc atagactttt 7981 ttaatatttt tttaactata tttgtttttt taatttcttt aagtttattt tatataattt 8041 tttgtttttt tagtttatta ttttttttca gagcctcgta tttttttaat tttcatgccc 8101 acttgactcc atttttttta agaaaaaata cagttatgtg gtccatatat gttttcctta 8161 gaactcttcg aatgtatttt ctaaacaaaa caaaaacaaa cacaaaataa tgttttataa 8221 aaatgctaaa aattcgtgta ataaattaaa atgctattaa gttaaacaaa aaaacaaaca 8281 tattataaaa ggtgttattt ctaaaaaaat gaataaaaaa agaaaacgaa aacgaaaaca 8341 tgcataaatg tattaacgaa acaaatgatt gcataattta tatgaacttc tctatatgtg 8401 taatgtgtct aaaacgcacc ataatcttcc tgatttaaat ataaaataat aataattata 8461 ataatatgta ttattattag taattaaaaa caaataggta ttacaaataa taagatattt 8521 tataaaatga cgaaacaaaa acaacaattt agtgtaattt gtatgtataa tgtcagtgtc 8581 tatgtgtcta ttgcataaac aaccaattat taaataacta atattaatat taatattata 8641 tatatatatt atattatata tttactactg attaacgtga tgtggtgtat tgatattttt 8701 aaaaacgaac ccaaaaaaaa gaagcgaaaa attaaaaaaa aaatacgaaa gcaaattgat 8761 attaacggtc atttctgata ttcatataca cacactcatg catatacatg cgtggcattt 8821 gtgtatgcgt tcgtgtacta aggtaaaaca aaagaaacaa acataacaaa aaaaaaaaaa 8881 cgaccgtcgt atatgaggag taaaaaccaa gaagaagtaa agaaataaaa taattttgaa 8941 ataactgtgc aaaa