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LOCUS XM_013247229 8892 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X3, mRNA. ACCESSION XM_013247229 VERSION XM_013247229.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247229.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8892 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8892 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083916" CDS 92..4813 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X1" /protein_id="XP_013102683.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQRFQIFPPPTTPPEPAPP DHQLITCSYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLDDKTDGRRNINKNSI WNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNMKNFQLVSEAVAKMNFG GDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQIYENEDCTESDSCASSI ERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMFGSYVSPPEIPLHYQRM VTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETLNEYNMNAKCLKEFEKS EKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTESQFEKLMISDKVEIPIF LIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTVIELLDIPVNAVATALK DFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRSCRLMALKTLLEKLPPA NFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDI VQTMIDQYPYLFCGEDAFVMV" misc_feature 146..169 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(152..172,479..481,659..664,680..682,755..763) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 308..310 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 320..328 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <533..811 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(659..664,677..682) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 755..763 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 851..1090 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1757..>2956 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4211..4780 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4283..4285,4397..4399,4409..4411,4655..4657, 4664..4669,4751..4753) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4283..4285 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 8892 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtgtttgtg cggtgttcaa ttatcgcagc tctttaaact ctgccataaa atctataaat 61 aaatgttgag aaatctgaaa taatataaaa gatgaaaacg tttaatatat cggtcatcgg 121 tctctcgggg actgagaagg accgaggaca agtcggtgtg ggcaaatcat gcttatgtaa 181 cagatttata aggcccatgg ccgatgatta cttcatagat cacatatcag ttttgagtca 241 gagtgacttc agtgggcgag ttgttaataa cgatcacttt ctatattggg gcgatgtgca 301 caagagcacc gacgaaggca ctgaatacac ctttcacatt atcgaacaga ccgaattcat 361 ggacgattcc acattccagc cctttaaggt tggcaaaatg gagacctacc tgaagcgatg 421 caccaccaca aaagtatttt cggccgaaaa actcatgtac atttgcaaga accaattggg 481 aattgagaaa gagtacgaac aaaagatatt gcccgatggc cgattggcca tagatggctt 541 cattgtggtg tttgatgtca gccctgtgcc aaatcgaaat attgaaaaac aggtggaatt 601 tgtacaaaat gcaattactt taatactcaa aaataagaag ccattggttt tggtgaccac 661 caaaaacgac gattcctgtg atctgtacat aagagaggcg gagaagatat gccagcgtaa 721 ggattacaag ggcatgatac agctggtgga gacatcggcc catgaatcca taaatacgga 781 tttggctttt ctgctgctgg ctcaaatgat agacaaagtg aaaaaccgca taaaaatcat 841 tccatatcaa gaagctgcta ggtcgcgcaa agaattgctc gaaagtcgtt cggaggcagt 901 gacgcgtctt ataagaaatc aaataaccga ttatcatgtc ctatggacac acggctcaaa 961 aatgcttgct caattcagag aatggacaga atttttgaat atttttggcc acgatgccgg 1021 gcagaagttg tttcgtcgtc acatgaagaa gctgcgtgac gactatatga atcaaaggct 1081 gcatcagtat ttggataaat ttgctcgtac actcgaatac atgttgccag atgtgaatgc 1141 tctctccacc agcgatgatg atatttggga atgtgccaag ggttatatta gaaaccattt 1201 agagtttgac caatactttt tcgaatgtcc ccaggccacg tggcaggagc tggtggacat 1261 ggatgagacg gaagatgagg cgcgtattcc ttttgatgtt ttagagactt cagaggcaga 1321 gacagtgttt aggaattttt tgaattctgt gcaacaggac aaaaagaaaa taggctggaa 1381 acaacaattc aaaatacttt tggaagagtc cggctttgtt actcccggca agcagttgtc 1441 tgaagttcgc gtactcttta tgggtcgtga atgttttgag gccttgtccg agcatgactg 1501 ccagcaaata tatgacatac atcaggatga gataattgag aagagtaaac aaaattttat 1561 tgagttactg ctggagcatg cccaattttt ccaacagttc aaaaatgtgg atattataac 1621 ccaagaagat gtaagacaaa taacagatat actgcaagat gattccagat acaagattat 1681 ggatcgcttg gaccaggaga gacgtgtcat tttattccag catttaggct ttatgcactg 1741 tcccatacgt gaccattgtc cattttacca cagttgtgtt gacaatttca ttgaagagat 1801 cttggccgac aagtccgccg gtagccataa aactctggga agtggtggca gtggcagctg 1861 gaagtcccaa ggttctgata aaactctcaa cttgctcatt gtgggttctg agcacttggc 1921 cagtgatcta cttaatgaca ttcgcatgtg caccggctcc aaaggcgaat atatatatga 1981 gaatcaaaca tattatctta actaccgcat agcgaatgga gatatggaag cctttaaagc 2041 tattgatgtc tattcaagcg gtttgatttg tgtctactca aatctgcagt cttttgaaac 2101 tcttaaggac aatctcgaac gaacactgct ttgcaatttg gaattagagg ataagtttga 2161 aaatcttcca atagtattag tctatcaacc acaagatcta aaggagaacg aagttgagta 2221 tctgagaaat gagggtttgc gtttggccga aatgttgcat tgcgatttca ttgatcacca 2281 gcaaagccat cagaaatatg tctatgaaat tttgaatata gtcattgatt ctttgcgagt 2341 ttccgaaatg aagaccttgg aaacttttcc acccaatcaa acggatttgc gtattttagt 2401 gtgcatgttt tgtggcgatc aatatgacat agaaaatctg gtaaatcccc ttatagatga 2461 atccacattt tgcaaagcaa tggaacattc cgtagttgtg gacgtcttca taggtgattc 2521 caagaaacgt gtggaattta tattgtcatc ataccatggc ataaatcaat atcgtgatga 2581 attgatacat ggttttatat ttgtgtactc caccaaaagg cgctcttcct tggctaatct 2641 tagtgtcttg gtatcgcaaa atgccaatat acctttgcag attatagcga ttaccgaaag 2701 tggaggagct aatgcatttt tcagcagtga actgtgtcaa tttcttataa ccgaaggtaa 2761 ttctttggca gatcgttaca aagcaagctt tatgacattc tcagcggatc aatatgtaaa 2821 atttgctttc tatagtccat ttttgaaaaa tgcttgggat aacaaatatg atgtagaaaa 2881 tctacacgtc gaagagtcaa ttacattgga ttcaggcgag ggcacacttg agaactcggt 2941 taagttgccc agaccaccac cgcgacatga aagctatatg ttatcgagta ccttaggtac 3001 ggatggctcc ggcagcgaaa actacgaaat gcttcctaca cgttctctaa actcattaaa 3061 tgaagaaaga gacatatctt tagatgaaat ctacgaagaa agcaacgaaa aaccaaaaat 3121 ggtccatcag agattccaga tatttccacc tccaacaact cctccagagc cagctcctcc 3181 agatcatcag ctcattacat gctcatataa gagccaattt gtttcagctt ccgagtctag 3241 tttggaagaa ataacatcgg atgtaagcgg gtcaaaggat tcattggcta cccatgatgc 3301 agaatggttg gatgataaaa cagatgggcg acgcaatata aataaaaatt ccatttggaa 3361 taattttggt ggctcaacgc acgcatatac aactggtcgt agacatatag attctaattt 3421 gaataaaatt cgtccaaaag gtccaagtca gaccctaaag caaccaggaa aattaaatat 3481 gaaaaatttt cagttagtta gcgaagctgt agcaaaaatg aatttcggag gcgattccta 3541 tttgcctatt tgtgagagtg gcgataagga ctccaaacgt tatacacaat tcgatcattc 3601 tcagttggat ggcgatgagg aggactctga ggagttagcc gaatatgaac aaatttatga 3661 aaatgaagac tgtaccgaat ccgatagttg tgctagttca atagagcgta aaaatcgaca 3721 acaaaatgcc tattataaac aaatcaataa aaagccaccc gtgaacaaaa agacaaagaa 3781 gaagaaagtt gccataccgg tgcaaactcc cagagtacct actatgtttg gttcatacgt 3841 aagcccacca gagataccat tgcattatca aagaatggta accgccgaga aaaaaaaaat 3901 tggcgatccc actattataa atgatatgat aaaaaccgac aaatcgccag agtacaccat 3961 ggtaccagat gcccctgtct tatttggcgc tcccgaaact cttaacgaat acaacatgaa 4021 tgccaaatgt ttaaaggaat ttgaaaaatc tgaaaagcgt cgcctaaagg aggaaaatac 4081 tagactacgc aaactgcaag aaaaggaaaa ggagcaagaa aagaagctga aacgtaaatt 4141 aaaacaaaat tccaagggtt tccccgacac tgaatctcaa tttgaaaagc ttatgatctc 4201 cgataaagtg gaaattccta tatttttaat caaatgcata gaatatatag aaaaagaagg 4261 tctggattcc gaaggcatat atagagttcc gggcagtcgt gcccatgtag acttgttatt 4321 tcaaaagttt gaagaagatt ccaatactgt tattgaactt ttggatatac ctgtcaatgc 4381 cgtggccaca gctctcaagg attttttctc aaaacgattg cctccattgt ttagcaagga 4441 tataataaag gaattggagg aagttgcggg ttcacgtaca gtgtgcggct ctaaagtgaa 4501 tgttgaagta aaaaccgatc gaagttgtcg tttaatggct ttaaagacgt tattggaaaa 4561 attaccgcct gctaattttg ctatattgaa gtacatattt cagcattttg tgcaagtttc 4621 cgacaattcc aaactcaata gcatggatag taaaaatttg gctatatgct ggtggcccac 4681 cttgattcct atcgatttta ccgatatggg ccattttgag caattgcgtc cttacctaga 4741 agatattgta caaacaatga ttgatcaata tccatatctg ttttgtggag aagacgcttt 4801 tgtcatggta taaatgaaca cccagtattt tctttattta atttgtcggt atatatataa 4861 atatatgtat gtgtgtttat gtgttattaa gttgtaaaac aacaacaaaa caaaaaaaga 4921 gaaaaaacag caaaatactt tttatagtat aaataatttc gatataagcg agatgaaagg 4981 aaagaaaaga tcaaaaaaaa aaagaaagaa aaagaaatcg aaagtaattg tgctcacata 5041 ccaaaacgtg tgtattccgg ttttgatgag tgcgtgtggt gtaaatcatt gtttttagtt 5101 gatagttgat ttttaaatta ttattataaa aaaaatatgt atttcattag ttaattgtac 5161 tatgtaaatt gatgtctccg tgtgtttgcg cgtgtaatcg cgtaagtaaa ctttagttgt 5221 agtaaacaga agtgagattt aaaacaacaa cagcaaccac aacaaccgca acaaacccga 5281 ataaataaga aaaaacttaa ttaagaagca aatggaaata aaacaaatca agcttaaaac 5341 ttaattggca agccaaaaga tagcaaaaaa agaaattcat acaaataaac acaaaaatta 5401 aaattataat aacaatgata atgataataa aacagccaga catacataga tagagaacga 5461 agatttgaaa cgaagccaat attaattcat aagaagccaa ccgattttta tcaaactcca 5521 acatataata ttatgtaggt taattcctcc accgccgcct aagttttaat tagccataat 5581 gcgagttaca cgctctcgca ttcttgtaaa ctcttattaa ttaatgtgtg cttttttaac 5641 aacatataca aaatcactta tttataaatt gaatatattg gaaaaaaacg tattgtcaat 5701 ttgtattact ttcctacata catgtataga gtttttttct atgacattta catcaacttc 5761 tacttcaaaa ctatctatct agaatttctc ttaaagatca aatgtttgca ctaaagagat 5821 ttttttgttt tatttttacc agttgttatc accatagcaa aaatttaaac ttaccctaca 5881 tatcttcttg agggaatgaa tgcacaacaa caacaacaat aaacaatgta tgtatgtata 5941 ttttgtaata ggaaaacagc ttatcttagg aacagaagct atttattccg aaagtttgtc 6001 tcactctctc tctctattgt gaattgaaat ttattttgtg acctgttact cttgctattg 6061 tactttttac aaaactcact gttattgttt ctcaatattt aactctcctc tcacaactac 6121 caaaagtagc aaatagagct aaggaatacc tatttggact ttttattaaa aatgcatcag 6181 tgacggtttt aataatttta ttgaaataaa attaaaatat ttttttatct tcagcagaat 6241 attggagaga ttactttatt gaatttttgg tatttgtgta aacattgtcc cctaaccacc 6301 aaaaaggtga aaatattcag taaaaaaaac aactcttgcg tccatacagt tttctaaatg 6361 taaaataaaa aatgacatta cgatataaag gcgggttata cggctgttta gacgtttaga 6421 tttattagtc atatatgact acaacccagc aaaattaata attaattagt tataccctcc 6481 accatgggat ggggtatact aattttgtca ttctgtttgt cctcgtaata ttcctctcag 6541 actccataat gtatatacat tcttgagtca tgtcaattta agtcgatcta gccatgtccg 6601 tccgtctgtc tgtcgaaagc acgctatctt tcgaaggagt aaagctagcc gcttgaaatt 6661 ttgatatagc tgccatataa ccagacttct tgagcctcta gaggccgcaa ttcttatctg 6721 ttttggctga aattttgcac gacgtgttag gttatgattt cgaagaactg tgctcagcat 6781 ggtctaaatc tcaaaatttt acacaattac ctcactatgg tgtccaacat tcaattcaat 6841 tatgggccga atcggaccat aacttaatat agctccaata ttatagcaat tcctttcttt 6901 tatcctttgt ttgccaaaaa agagatattg ggaaaagaac tcgacaaatg cgatctatgg 6961 tggaggtttt ataagatttg acccggccga acttagcacg cttttacttg tttcaaatag 7021 tttttggcca aacgttgcca tgctggatga tactgatccc accaaatata gaacattatc 7081 ttttcgtcat ggacatatgg cctaggcgct gatttagctg gctggctggc tttcgttgtg 7141 tatcaaattt gcatcattat ttctgtatgg ttcaagctgc atttccgata tgcaaaatca 7201 cctttcaatg tctctgattg tatcgtaatc tcaggcatag ccctctaatc aggcatagcc 7261 gtagccctct atcgtaatct caggcataac cgtagccctc taatccctct gttcattgcg 7321 caaaccacaa tttttttttt gagttggtgc atgtttacca gctgttttct aaaatgcgga 7381 aagttaccag acttcactgt aaaatattta atttaacatt atgaccctta caaatttcat 7441 tttattattt gctgttttat tttagtactg gatacacaag ccgtgaaaga cacaaataaa 7501 acgcaaaaat gtgtcctggt agtagcgttt tcccacctgt caaataggaa taaggaaaaa 7561 cgtaaaaata ttttaaaaat gtataaaata aaatttattt ttttctgcca ttcataatag 7621 agttatttct gcgggtggcc atatttaatt gtgaaaaaca tatcagggca attctgaagg 7681 cagatttcct ttgatttttc gttgtactgg ataggtgtta tttccataca attttcgctg 7741 tactgcactg tatagtacta aaataaaaca aggaaattta tgccatatat tgtctaaatc 7801 cggatattta aattttataa tttaaattta ttgttgtttt tattttggtt tccccttttt 7861 aatacttatg tcatctctat agcgaatttt ttatctattt taatactcat agactttttt 7921 aatatttttt taactatatt tgttttttta atttctttaa gtttatttta tataattttt 7981 tgttttttta gtttattatt ttttttcaga gcctcgtatt tttttaattt tcatgcccac 8041 ttgactccat tttttttaag aaaaaataca gttatgtggt ccatatatgt tttccttaga 8101 actcttcgaa tgtattttct aaacaaaaca aaaacaaaca caaaataatg ttttataaaa 8161 atgctaaaaa ttcgtgtaat aaattaaaat gctattaagt taaacaaaaa aacaaacata 8221 ttataaaagg tgttatttct aaaaaaatga ataaaaaaag aaaacgaaaa cgaaaacatg 8281 cataaatgta ttaacgaaac aaatgattgc ataatttata tgaacttctc tatatgtgta 8341 atgtgtctaa aacgcaccat aatcttcctg atttaaatat aaaataataa taattataat 8401 aatatgtatt attattagta attaaaaaca aataggtatt acaaataata agatatttta 8461 taaaatgacg aaacaaaaac aacaatttag tgtaatttgt atgtataatg tcagtgtcta 8521 tgtgtctatt gcataaacaa ccaattatta aataactaat attaatatta atattatata 8581 tatatattat attatatatt tactactgat taacgtgatg tggtgtattg atatttttaa 8641 aaacgaaccc aaaaaaaaga agcgaaaaat taaaaaaaaa atacgaaagc aaattgatat 8701 taacggtcat ttctgatatt catatacaca cactcatgca tatacatgcg tggcatttgt 8761 gtatgcgttc gtgtactaag gtaaaacaaa agaaacaaac ataacaaaaa aaaaaaaacg 8821 accgtcgtat atgaggagta aaaaccaaga agaagtaaag aaataaaata attttgaaat 8881 aactgtgcaa aa