Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013247228 9033 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X1, mRNA. ACCESSION XM_013247228 VERSION XM_013247228.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247228.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9033 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9033 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083916" CDS 233..4954 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X1" /protein_id="XP_013102682.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQRFQIFPPPTTPPEPAPP DHQLITCSYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLDDKTDGRRNINKNSI WNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNMKNFQLVSEAVAKMNFG GDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQIYENEDCTESDSCASSI ERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMFGSYVSPPEIPLHYQRM VTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETLNEYNMNAKCLKEFEKS EKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTESQFEKLMISDKVEIPIF LIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTVIELLDIPVNAVATALK DFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRSCRLMALKTLLEKLPPA NFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDI VQTMIDQYPYLFCGEDAFVMV" misc_feature 287..310 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(293..313,620..622,800..805,821..823,896..904) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 449..451 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 461..469 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <674..952 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(800..805,818..823) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 896..904 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 992..1231 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1898..>3097 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4352..4921 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4424..4426,4538..4540,4550..4552,4796..4798, 4805..4810,4892..4894) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4424..4426 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 9033 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctcctcggct tcgtactctg gtgacaagtc gggtgtgtat ttacgtggaa aaagaattgt 61 cgggggcctc cttgcaccat tattttgcgt aaaactcgga taaacaattt ttataatggc 121 tcaacatacc ccagaacaac gaaattcaga gaaatgcgag cgtggaatct aaaactaata 181 caatagttag aaaataatta acaagaaaca ttttgagtgc agtttataaa agatgaaaac 241 gtttaatata tcggtcatcg gtctctcggg gactgagaag gaccgaggac aagtcggtgt 301 gggcaaatca tgcttatgta acagatttat aaggcccatg gccgatgatt acttcataga 361 tcacatatca gttttgagtc agagtgactt cagtgggcga gttgttaata acgatcactt 421 tctatattgg ggcgatgtgc acaagagcac cgacgaaggc actgaataca cctttcacat 481 tatcgaacag accgaattca tggacgattc cacattccag ccctttaagg ttggcaaaat 541 ggagacctac ctgaagcgat gcaccaccac aaaagtattt tcggccgaaa aactcatgta 601 catttgcaag aaccaattgg gaattgagaa agagtacgaa caaaagatat tgcccgatgg 661 ccgattggcc atagatggct tcattgtggt gtttgatgtc agccctgtgc caaatcgaaa 721 tattgaaaaa caggtggaat ttgtacaaaa tgcaattact ttaatactca aaaataagaa 781 gccattggtt ttggtgacca ccaaaaacga cgattcctgt gatctgtaca taagagaggc 841 ggagaagata tgccagcgta aggattacaa gggcatgata cagctggtgg agacatcggc 901 ccatgaatcc ataaatacgg atttggcttt tctgctgctg gctcaaatga tagacaaagt 961 gaaaaaccgc ataaaaatca ttccatatca agaagctgct aggtcgcgca aagaattgct 1021 cgaaagtcgt tcggaggcag tgacgcgtct tataagaaat caaataaccg attatcatgt 1081 cctatggaca cacggctcaa aaatgcttgc tcaattcaga gaatggacag aatttttgaa 1141 tatttttggc cacgatgccg ggcagaagtt gtttcgtcgt cacatgaaga agctgcgtga 1201 cgactatatg aatcaaaggc tgcatcagta tttggataaa tttgctcgta cactcgaata 1261 catgttgcca gatgtgaatg ctctctccac cagcgatgat gatatttggg aatgtgccaa 1321 gggttatatt agaaaccatt tagagtttga ccaatacttt ttcgaatgtc cccaggccac 1381 gtggcaggag ctggtggaca tggatgagac ggaagatgag gcgcgtattc cttttgatgt 1441 tttagagact tcagaggcag agacagtgtt taggaatttt ttgaattctg tgcaacagga 1501 caaaaagaaa ataggctgga aacaacaatt caaaatactt ttggaagagt ccggctttgt 1561 tactcccggc aagcagttgt ctgaagttcg cgtactcttt atgggtcgtg aatgttttga 1621 ggccttgtcc gagcatgact gccagcaaat atatgacata catcaggatg agataattga 1681 gaagagtaaa caaaatttta ttgagttact gctggagcat gcccaatttt tccaacagtt 1741 caaaaatgtg gatattataa cccaagaaga tgtaagacaa ataacagata tactgcaaga 1801 tgattccaga tacaagatta tggatcgctt ggaccaggag agacgtgtca ttttattcca 1861 gcatttaggc tttatgcact gtcccatacg tgaccattgt ccattttacc acagttgtgt 1921 tgacaatttc attgaagaga tcttggccga caagtccgcc ggtagccata aaactctggg 1981 aagtggtggc agtggcagct ggaagtccca aggttctgat aaaactctca acttgctcat 2041 tgtgggttct gagcacttgg ccagtgatct acttaatgac attcgcatgt gcaccggctc 2101 caaaggcgaa tatatatatg agaatcaaac atattatctt aactaccgca tagcgaatgg 2161 agatatggaa gcctttaaag ctattgatgt ctattcaagc ggtttgattt gtgtctactc 2221 aaatctgcag tcttttgaaa ctcttaagga caatctcgaa cgaacactgc tttgcaattt 2281 ggaattagag gataagtttg aaaatcttcc aatagtatta gtctatcaac cacaagatct 2341 aaaggagaac gaagttgagt atctgagaaa tgagggtttg cgtttggccg aaatgttgca 2401 ttgcgatttc attgatcacc agcaaagcca tcagaaatat gtctatgaaa ttttgaatat 2461 agtcattgat tctttgcgag tttccgaaat gaagaccttg gaaacttttc cacccaatca 2521 aacggatttg cgtattttag tgtgcatgtt ttgtggcgat caatatgaca tagaaaatct 2581 ggtaaatccc cttatagatg aatccacatt ttgcaaagca atggaacatt ccgtagttgt 2641 ggacgtcttc ataggtgatt ccaagaaacg tgtggaattt atattgtcat cataccatgg 2701 cataaatcaa tatcgtgatg aattgataca tggttttata tttgtgtact ccaccaaaag 2761 gcgctcttcc ttggctaatc ttagtgtctt ggtatcgcaa aatgccaata tacctttgca 2821 gattatagcg attaccgaaa gtggaggagc taatgcattt ttcagcagtg aactgtgtca 2881 atttcttata accgaaggta attctttggc agatcgttac aaagcaagct ttatgacatt 2941 ctcagcggat caatatgtaa aatttgcttt ctatagtcca tttttgaaaa atgcttggga 3001 taacaaatat gatgtagaaa atctacacgt cgaagagtca attacattgg attcaggcga 3061 gggcacactt gagaactcgg ttaagttgcc cagaccacca ccgcgacatg aaagctatat 3121 gttatcgagt accttaggta cggatggctc cggcagcgaa aactacgaaa tgcttcctac 3181 acgttctcta aactcattaa atgaagaaag agacatatct ttagatgaaa tctacgaaga 3241 aagcaacgaa aaaccaaaaa tggtccatca gagattccag atatttccac ctccaacaac 3301 tcctccagag ccagctcctc cagatcatca gctcattaca tgctcatata agagccaatt 3361 tgtttcagct tccgagtcta gtttggaaga aataacatcg gatgtaagcg ggtcaaagga 3421 ttcattggct acccatgatg cagaatggtt ggatgataaa acagatgggc gacgcaatat 3481 aaataaaaat tccatttgga ataattttgg tggctcaacg cacgcatata caactggtcg 3541 tagacatata gattctaatt tgaataaaat tcgtccaaaa ggtccaagtc agaccctaaa 3601 gcaaccagga aaattaaata tgaaaaattt tcagttagtt agcgaagctg tagcaaaaat 3661 gaatttcgga ggcgattcct atttgcctat ttgtgagagt ggcgataagg actccaaacg 3721 ttatacacaa ttcgatcatt ctcagttgga tggcgatgag gaggactctg aggagttagc 3781 cgaatatgaa caaatttatg aaaatgaaga ctgtaccgaa tccgatagtt gtgctagttc 3841 aatagagcgt aaaaatcgac aacaaaatgc ctattataaa caaatcaata aaaagccacc 3901 cgtgaacaaa aagacaaaga agaagaaagt tgccataccg gtgcaaactc ccagagtacc 3961 tactatgttt ggttcatacg taagcccacc agagatacca ttgcattatc aaagaatggt 4021 aaccgccgag aaaaaaaaaa ttggcgatcc cactattata aatgatatga taaaaaccga 4081 caaatcgcca gagtacacca tggtaccaga tgcccctgtc ttatttggcg ctcccgaaac 4141 tcttaacgaa tacaacatga atgccaaatg tttaaaggaa tttgaaaaat ctgaaaagcg 4201 tcgcctaaag gaggaaaata ctagactacg caaactgcaa gaaaaggaaa aggagcaaga 4261 aaagaagctg aaacgtaaat taaaacaaaa ttccaagggt ttccccgaca ctgaatctca 4321 atttgaaaag cttatgatct ccgataaagt ggaaattcct atatttttaa tcaaatgcat 4381 agaatatata gaaaaagaag gtctggattc cgaaggcata tatagagttc cgggcagtcg 4441 tgcccatgta gacttgttat ttcaaaagtt tgaagaagat tccaatactg ttattgaact 4501 tttggatata cctgtcaatg ccgtggccac agctctcaag gattttttct caaaacgatt 4561 gcctccattg tttagcaagg atataataaa ggaattggag gaagttgcgg gttcacgtac 4621 agtgtgcggc tctaaagtga atgttgaagt aaaaaccgat cgaagttgtc gtttaatggc 4681 tttaaagacg ttattggaaa aattaccgcc tgctaatttt gctatattga agtacatatt 4741 tcagcatttt gtgcaagttt ccgacaattc caaactcaat agcatggata gtaaaaattt 4801 ggctatatgc tggtggccca ccttgattcc tatcgatttt accgatatgg gccattttga 4861 gcaattgcgt ccttacctag aagatattgt acaaacaatg attgatcaat atccatatct 4921 gttttgtgga gaagacgctt ttgtcatggt ataaatgaac acccagtatt ttctttattt 4981 aatttgtcgg tatatatata aatatatgta tgtgtgttta tgtgttatta agttgtaaaa 5041 caacaacaaa acaaaaaaag agaaaaaaca gcaaaatact ttttatagta taaataattt 5101 cgatataagc gagatgaaag gaaagaaaag atcaaaaaaa aaaagaaaga aaaagaaatc 5161 gaaagtaatt gtgctcacat accaaaacgt gtgtattccg gttttgatga gtgcgtgtgg 5221 tgtaaatcat tgtttttagt tgatagttga tttttaaatt attattataa aaaaaatatg 5281 tatttcatta gttaattgta ctatgtaaat tgatgtctcc gtgtgtttgc gcgtgtaatc 5341 gcgtaagtaa actttagttg tagtaaacag aagtgagatt taaaacaaca acagcaacca 5401 caacaaccgc aacaaacccg aataaataag aaaaaactta attaagaagc aaatggaaat 5461 aaaacaaatc aagcttaaaa cttaattggc aagccaaaag atagcaaaaa aagaaattca 5521 tacaaataaa cacaaaaatt aaaattataa taacaatgat aatgataata aaacagccag 5581 acatacatag atagagaacg aagatttgaa acgaagccaa tattaattca taagaagcca 5641 accgattttt atcaaactcc aacatataat attatgtagg ttaattcctc caccgccgcc 5701 taagttttaa ttagccataa tgcgagttac acgctctcgc attcttgtaa actcttatta 5761 attaatgtgt gcttttttaa caacatatac aaaatcactt atttataaat tgaatatatt 5821 ggaaaaaaac gtattgtcaa tttgtattac tttcctacat acatgtatag agtttttttc 5881 tatgacattt acatcaactt ctacttcaaa actatctatc tagaatttct cttaaagatc 5941 aaatgtttgc actaaagaga tttttttgtt ttatttttac cagttgttat caccatagca 6001 aaaatttaaa cttaccctac atatcttctt gagggaatga atgcacaaca acaacaacaa 6061 taaacaatgt atgtatgtat attttgtaat aggaaaacag cttatcttag gaacagaagc 6121 tatttattcc gaaagtttgt ctcactctct ctctctattg tgaattgaaa tttattttgt 6181 gacctgttac tcttgctatt gtacttttta caaaactcac tgttattgtt tctcaatatt 6241 taactctcct ctcacaacta ccaaaagtag caaatagagc taaggaatac ctatttggac 6301 tttttattaa aaatgcatca gtgacggttt taataatttt attgaaataa aattaaaata 6361 tttttttatc ttcagcagaa tattggagag attactttat tgaatttttg gtatttgtgt 6421 aaacattgtc ccctaaccac caaaaaggtg aaaatattca gtaaaaaaaa caactcttgc 6481 gtccatacag ttttctaaat gtaaaataaa aaatgacatt acgatataaa ggcgggttat 6541 acggctgttt agacgtttag atttattagt catatatgac tacaacccag caaaattaat 6601 aattaattag ttataccctc caccatggga tggggtatac taattttgtc attctgtttg 6661 tcctcgtaat attcctctca gactccataa tgtatataca ttcttgagtc atgtcaattt 6721 aagtcgatct agccatgtcc gtccgtctgt ctgtcgaaag cacgctatct ttcgaaggag 6781 taaagctagc cgcttgaaat tttgatatag ctgccatata accagacttc ttgagcctct 6841 agaggccgca attcttatct gttttggctg aaattttgca cgacgtgtta ggttatgatt 6901 tcgaagaact gtgctcagca tggtctaaat ctcaaaattt tacacaatta cctcactatg 6961 gtgtccaaca ttcaattcaa ttatgggccg aatcggacca taacttaata tagctccaat 7021 attatagcaa ttcctttctt ttatcctttg tttgccaaaa aagagatatt gggaaaagaa 7081 ctcgacaaat gcgatctatg gtggaggttt tataagattt gacccggccg aacttagcac 7141 gcttttactt gtttcaaata gtttttggcc aaacgttgcc atgctggatg atactgatcc 7201 caccaaatat agaacattat cttttcgtca tggacatatg gcctaggcgc tgatttagct 7261 ggctggctgg ctttcgttgt gtatcaaatt tgcatcatta tttctgtatg gttcaagctg 7321 catttccgat atgcaaaatc acctttcaat gtctctgatt gtatcgtaat ctcaggcata 7381 gccctctaat caggcatagc cgtagccctc tatcgtaatc tcaggcataa ccgtagccct 7441 ctaatccctc tgttcattgc gcaaaccaca attttttttt tgagttggtg catgtttacc 7501 agctgttttc taaaatgcgg aaagttacca gacttcactg taaaatattt aatttaacat 7561 tatgaccctt acaaatttca ttttattatt tgctgtttta ttttagtact ggatacacaa 7621 gccgtgaaag acacaaataa aacgcaaaaa tgtgtcctgg tagtagcgtt ttcccacctg 7681 tcaaatagga ataaggaaaa acgtaaaaat attttaaaaa tgtataaaat aaaatttatt 7741 tttttctgcc attcataata gagttatttc tgcgggtggc catatttaat tgtgaaaaac 7801 atatcagggc aattctgaag gcagatttcc tttgattttt cgttgtactg gataggtgtt 7861 atttccatac aattttcgct gtactgcact gtatagtact aaaataaaac aaggaaattt 7921 atgccatata ttgtctaaat ccggatattt aaattttata atttaaattt attgttgttt 7981 ttattttggt ttcccctttt taatacttat gtcatctcta tagcgaattt tttatctatt 8041 ttaatactca tagacttttt taatattttt ttaactatat ttgttttttt aatttcttta 8101 agtttatttt atataatttt ttgttttttt agtttattat tttttttcag agcctcgtat 8161 ttttttaatt ttcatgccca cttgactcca ttttttttaa gaaaaaatac agttatgtgg 8221 tccatatatg ttttccttag aactcttcga atgtattttc taaacaaaac aaaaacaaac 8281 acaaaataat gttttataaa aatgctaaaa attcgtgtaa taaattaaaa tgctattaag 8341 ttaaacaaaa aaacaaacat attataaaag gtgttatttc taaaaaaatg aataaaaaaa 8401 gaaaacgaaa acgaaaacat gcataaatgt attaacgaaa caaatgattg cataatttat 8461 atgaacttct ctatatgtgt aatgtgtcta aaacgcacca taatcttcct gatttaaata 8521 taaaataata ataattataa taatatgtat tattattagt aattaaaaac aaataggtat 8581 tacaaataat aagatatttt ataaaatgac gaaacaaaaa caacaattta gtgtaatttg 8641 tatgtataat gtcagtgtct atgtgtctat tgcataaaca accaattatt aaataactaa 8701 tattaatatt aatattatat atatatatta tattatatat ttactactga ttaacgtgat 8761 gtggtgtatt gatattttta aaaacgaacc caaaaaaaag aagcgaaaaa ttaaaaaaaa 8821 aatacgaaag caaattgata ttaacggtca tttctgatat tcatatacac acactcatgc 8881 atatacatgc gtggcatttg tgtatgcgtt cgtgtactaa ggtaaaacaa aagaaacaaa 8941 cataacaaaa aaaaaaaaac gaccgtcgta tatgaggagt aaaaaccaag aagaagtaaa 9001 gaaataaaat aattttgaaa taactgtgca aaa