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PREDICTED: Stomoxys calcitrans endoplasmic reticulum


LOCUS       XM_013247225            1250 bp    mRNA    linear   INV 02-SEP-2023
            membrane-associated RNA degradation protein (LOC106083913),
            transcript variant X2, mRNA.
ACCESSION   XM_013247225
VERSION     XM_013247225.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013247225.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1250
                     /gene="LOC106083913"
                     /note="endoplasmic reticulum membrane-associated RNA
                     degradation protein; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:106083913"
     CDS             33..1154
                     /gene="LOC106083913"
                     /codon_start=1
                     /product="endoplasmic reticulum membrane-associated RNA
                     degradation protein isoform X2"
                     /protein_id="XP_013102679.2"
                     /db_xref="GeneID:106083913"
                     /translation="MFPLEKKSLINEKILIFYREFDNVDSDNLEIYFTKENEFNARTI
                     VELLFPECQDMHNLCIALNSFKYEDFVKYHSAMLPIHKCAEILVHTWGNPYFSSSGLM
                     WMGVNSKFFYENMMSVGTCKYVEHILLMTSLLENALSNIYYTETKGKQAPHLLKDLIS
                     TPEVERVFDTELIILLKILMGIPNSINLRNIVWHGFPKPFEIPLYYECVLLIMIHTLG
                     QRVKANNYVINERPLIRDFTTPLDNITNEIKMPIKNISFYEEKIMEIENDFAQDYVPF
                     WLQLCSHYRDNNNFHFIMLAMPQIELLLRLHYSHINGVDVSAKLHEYYITMDTIFETE
                     VASNRTTSNTNEDQQKFFNKLLDFAAYPQFQDFLSMQGP"
ORIGIN      
        1 attggtggga gggagagtag tcatcaaacg ctatgtttcc tttagaaaaa aaaagtttaa
       61 tcaatgaaaa gattttgata ttttatagag aattcgacaa tgttgactct gataatttgg
      121 aaatatattt cacaaaagaa aacgaattta atgcaaggac aattgttgaa ttactatttc
      181 cagaatgtca agatatgcac aatttgtgta tagctctaaa ctctttcaaa tatgaagact
      241 tcgtcaaata ccattctgca atgcttccaa tacacaaatg tgccgaaata ttggttcaca
      301 cttggggaaa tccatatttt tcttcttctg gcttaatgtg gatgggtgtg aatagcaaat
      361 tcttttatga aaatatgatg tctgtaggta cctgcaaata tgtggaacat atacttttaa
      421 tgacctcact tctagaaaat gccctatcta atatatacta taccgaaacc aagggtaaac
      481 aagcaccaca tttattaaaa gatttaataa gtactccgga agtggaaaga gtattcgata
      541 cagaattgat tattctactg aaaatactaa tgggcatacc aaattctata aacttacgaa
      601 atattgtatg gcatggattc ccaaagcctt ttgaaatccc tctctattat gagtgtgtat
      661 tattgatcat gatacacacc ttgggccaaa gggttaaggc caacaattat gtaatcaacg
      721 aaaggccttt gataagggat tttacaacac cactagacaa cattacaaat gaaatcaaga
      781 tgccgataaa aaatataagc ttttatgagg aaaaaatcat ggaaatcgag aacgatttcg
      841 cccaggatta tgtgcctttt tggctgcaac tgtgctcaca ttatagagat aataataatt
      901 ttcattttat aatgttggct atgcctcaaa tagaattgct gcttagattg cattacagtc
      961 acatcaatgg cgtagatgta agtgctaaat tgcatgagta ctatataaca atggatacaa
     1021 tattcgaaac ggaggtagct agtaacagaa ctactagtaa taccaacgag gatcagcaga
     1081 aatttttcaa taaactatta gactttgcag cttatccaca attccaagat ttcttaagca
     1141 tgcaaggacc atagccgaaa acttagtaag atattcacat tatcaaagca atgagtggat
     1201 caaatcttta gagctttgtg ataaatttca agaaatctat aacaaattgt