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LOCUS XM_013247210 8174 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013247210 VERSION XM_013247210.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247210.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8174 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8174 /gene="LOC106083906" /note="protein TIS11; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106083906" CDS 16..1446 /gene="LOC106083906" /codon_start=1 /product="protein TIS11 isoform X2" /protein_id="XP_013102664.2" /db_xref="GeneID:106083906" /translation="MMVNYCEYNKNIDKPLQNHHNHHMSNGHINGGSSLSELNIMDIN CSNNSSMDHMDQMDQLQQQIQHNSTTSNTNAQTKALNHQYRIHAALTRTISTPQPQIK PPHHLSTLQQHQTQAQSQQQHDPNVAMVNTLIENLGNINLHRKLERTQSEPLPQQVNA SRYKTELCRPFEEAGECKYGEKCQFAHGYHELRNLQRHPKYKTEYCRTFHSVGFCPYG PRCHFVHNADEARALQQQQQQQQQQQQQQQQQFQQPQQQTKLQNHSNYYINNPLSAKS SLNGGAVATAAAAGGINHSLPLSPPLSMSTGSDRESPTGSLSLSPTSSMTNFTFGEQI SPANSVFQISFNYGSTPPDSPNEPMSPVNTPPPTHILGAIYSKPLVSNNTNGSGGQVV AAAASSSIAPPCKQLLQKSSSSPIAILRNPNAGVGVGSGATKTTTPTKVNSVSSLNGA VAADEARLPVFNRISSVADTFPHVAL" polyA_site 8174 /gene="LOC106083906" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcacaagat taccaatgat ggtgaattat tgtgaatata ataaaaacat tgataaacct 61 cttcagaatc atcataatca tcatatgtct aatggacata taaatggcgg cagctcattg 121 tccgaactca acatcatgga tattaactgt tcaaacaact cctcaatgga tcatatggac 181 caaatggatc agttgcaaca acaaattcaa cacaattcca ccacatcgaa cacaaatgct 241 caaactaaag cgctcaatca tcaatatcgc attcatgccg ctttgactcg caccatctct 301 acgccccagc cgcaaatcaa accaccacat catctaagta cattgcaaca gcatcaaaca 361 caagcacagt cacaacagca acatgatccg aatgtggcaa tggtgaatac cctaattgag 421 aatttgggca acataaatct acataggaag ctggaaagaa cacaatcgga gccattgccg 481 caacaggtta atgcatcaag gtacaaaact gaactttgtc gcccctttga agaagcaggc 541 gaatgcaagt atggtgaaaa gtgccagttc gctcatggct atcatgaatt gcgtaaccta 601 cagagacatc ccaagtacaa aacggaatat tgtcgcactt tccatagcgt gggcttttgc 661 ccctatggac cacgttgcca ttttgtgcac aacgctgatg aagcgcgagc tcttcaacag 721 cagcaacaac agcagcagca gcaacaacaa caacaacagc aacaatttca acaaccacaa 781 caacaaacta aattacaaaa tcattccaat tattatataa acaacccctt gagtgccaaa 841 tctagtctca atggaggagc agtagcaaca gcagcagcag ccggcggtat caatcattcc 901 ctaccgctaa gtcctccctt gagcatgtcc accggctccg atcgcgaatc accaactggc 961 tcattgtcac tttcgcccac aagttccatg acaaatttca catttggtga acaaatcagt 1021 ccagcaaatt ccgtgtttca aataagcttc aattatggga gtacaccacc cgatagtccc 1081 aatgaaccca tgtcgccagt gaacacacca ccacccaccc atatcttggg tgccatatat 1141 agtaagccgt tggtgtccaa taacaccaat ggtagcggtg gtcaggttgt tgctgccgct 1201 gccagctcct cgattgcacc accctgcaaa caattgttgc agaaaagttc cagctctccc 1261 atagcgattc tgaggaaccc taatgccggc gttggtgttg gcagtggtgc caccaaaact 1321 actactccta ccaaagtcaa ctctgtgtca tcgttgaatg gtgctgtggc agccgatgag 1381 gcacgtttac ctgtgttcaa tcgcattagc tcagtagcag atacatttcc ccatgtagct 1441 ttataaacat ctctgtaata tagtagttta atttgatcat atgcatactt tcaaacatat 1501 atgtaacaaa gaacataacg cgtgcgcaaa cctgcttgcg cgttgaccca gcaacttacc 1561 aacaagcgac aaagaaaaaa tctcaataat ttcacacccc cacacgacgc atacaaatat 1621 ttaattgaaa ccagagacaa ttaaaaattc tagttttttt tctttatgca tattaatatt 1681 aacgaaaaca aaaaatcttt tatgtgtaat taattataaa ataactactt ttttactttt 1741 ttatgctatc atctctattt tttaatgttt ttatccatat gcatatatat tttacacaga 1801 cacccctatc tatatctatc aatctaactt ttatatacat ctacatattt tgttatttaa 1861 caacacaatt catttattta aacaacaaca accagtacag acagaactaa ccaccaaaca 1921 actaaccgac aaccatttaa caacaatcag catagacgta cagacagcag acagagacag 1981 acagcaaata actaaaaaaa atcattaatt tatatacata tctataaaac aaaaacaaaa 2041 ctgatatttg catatgcaca cttataaaag aaacaacaac gacaaactgc taaaaaatgt 2101 actaaattat tgaaactatt attgatgaaa aatgttaagc tgttttgttt ttgctctgca 2161 aagtagcttt tgatatttat catgcgataa catggggagc acttgcatat tgctgctcca 2221 tataaatacc tagtatttaa aaaaatttgt aacggtataa tgcttggttt gtttgtttgt 2281 ctttccatgt tgcgtctata cgtgctatcg gctggcgtca catgaaatcg ataacatttt 2341 tagcactatg ccatacaaag gcgtgttatc gttttcacat gtaatcgaaa gcaaagttac 2401 attgcagtgc aaaactaaga caactactct gttataacta ttatgcaaac attaacattc 2461 atacaacata ttatagaaaa atatccatac aaacaacatt gtatatgtaa acatgtatac 2521 acaagcacac gcaacatttt aactttatat atacatatta cttattataa ttatttaaaa 2581 caaaaaaaaa acgcaacaat ttgattattt atctcaaaag gaaaaaaaaa caagaaaaca 2641 cactactatt ataattatat actattatta tatttactat ttataattta tatctatata 2701 tatatataca tacacatatt taattttaca cataattatc cataaaagtg gatatgactt 2761 tttttgaaaa aacatatacc tatttttaaa caaattattt aaaagaaaaa caaaaccaac 2821 ataaatacac aatgtaaatg taaaacttct ggctgggttg ctttatgatc taaacgatgt 2881 aaaaaagaaa aaacaaaaaa atgtttgcat ttattaaaat taatcttttt atttattttt 2941 ttttttcttc cttcttaact tatttcttag acaaacaaaa ttttgtaact taacaaaaaa 3001 gcgttaaaga aaagacattc aaacaaaaaa aaagaccaga gaatataaga tcttgaaaag 3061 aaaagcaaaa aaaaaaaaac aaattttaag acaaatcatt agatgttttc aaaaaagcaa 3121 tggagtgata tttttcaaaa aaacaaaaac tcacaaaact aaatgcctaa ataaaataag 3181 cacacatatt aacagacttt aaaaagagag tgagagagag agagaaaaaa aaaaacaaac 3241 aacgagttgt taaaatatca aaagaaatag ttgtcatatt gtgccaaaat tataacagaa 3301 acagtttatt tcctccctca tatccctcaa acaagaattc actaagggaa acatcttatt 3361 ttaataacat ttaccaacac taaggaggga aatattagtt gtctccattt ccatcatacc 3421 aggaacatga atattttaag agttaaaaaa aaacaccaca ttgaaaagaa aaagtatggc 3481 taaattaccg caaacttcat ttctgaatac tgaacacttc aaattgtttt aaaatcgagc 3541 ttaacattaa gggcccgttt ttttttaaaa agcttaatga agccttataa tcagtttaca 3601 catcatgata cttggtcatt gtaataatat tggtgaaatg cgtcacatgg ccgaaaaatc 3661 taaatcattt gattttttca atgactgtcg tctatcgatt accatttaca cagaaatgtg 3721 taatcattaa ttgacagctg ttgaaaaata tgttctggcc aaaatcaaat tataaaaaga 3781 gaagaaaagt ttggaaagta aaataaaatc aaagaaaaga aaaaaatcta tacagatgat 3841 gagtacgatc atgatgtgac gcataaactg ccaattatta taggtttatt taacaattct 3901 ataagggaac tctctccaag aaatcaattc cgattctaca ttaagttttg tatataacgg 3961 tataagaaca cattgttcga gaattataaa aggtgatgaa atgttaaggg ccgatgttga 4021 atgtcaaacc accatatgaa atgtcaaatt ttttctttct gaatttcaga ctaactcaat 4081 ttaaaccatg taaggataca caattgagca atgcgtttaa gcttttcaaa atcaacatct 4141 tcgctttaaa tgtaaccacc ctttatatag cagatagtta aagcatattt tgcccaataa 4201 gggtatagtc tgagaaactt ttgagagctt ttgggtttga tgttaaccag aatgcttttt 4261 atcatcttat ttatttattg gatcactagt aggcggcaaa tgggtttgcc tatgcattcg 4321 aacagggtag cagctcgttc tatcgttgtg taaccaaagg ggcaatttga tactttttat 4381 aaaggtttgc ccattttagt gacccttttt tgacaaatta tagctcgagt aaggaaatgc 4441 aatttggatt gtcataaagt ggatgaatga aactagttaa aaatattttg ccgtcatata 4501 aggtcatgtt ttgtagaaaa ttggcttgtc gaaaaccagc tgtaaaaatt gctcaaaaat 4561 tctaaaaaaa tatatatgaa tgagatttct ggaaatcgtt ctagtatctt ttagcattta 4621 atggtttctg tattataaaa aacatggcga taagcttacc acttttggga aaagttgcga 4681 ttttatgtga aagtcaacaa aatccacttt tcttcgctaa attgtcataa aatattaagt 4741 aaacgtttgg ttttttgttt ttgtaaacaa tttgtggctg ggataataaa aaaaatttat 4801 ttgtttaaaa ttttttgaaa aaattaaaat ttcttttttt aatatttaat ttttttaact 4861 taagatttta agatttatat ttcaattatt tttgtttttt ttttttcaat ttaaatacaa 4921 ttttttcaag ctttaaaaaa gtatttttgg taaaaaataa ttaaattaaa aattcttcaa 4981 ttttttatat ttaaaaaaaa tttaacaaaa tgctacctca acataattag ccaaaataat 5041 caatatatta aatttctcaa tcgagggtct ggcgttataa tggtttaaga aaacctttca 5101 aaattctatt tgcatagaaa atttcttaat tatatatata tattttaata ttactttttt 5161 taatccctta acttctgacc cttgatttcc ttttaattat ttaaagcatt tatgttggct 5221 tagtattttt tttaaatact gaaaaaaatt aaagcaaagc aaaggaaagt tgtctgtagc 5281 ccaaaatagt aggcctatcg tccttaatgt tttttttttt ctaatatcta accctcaaaa 5341 actacaagaa aactcgaagt ttccagaact ttacacttgc aagaatttta aaaagatttt 5401 ttatttgaat tttggagctt tgcaaaattg ctaactttta ccaagaaaat aaccttatag 5461 gacaagacat aaatttgttt aactagtttc attcgtccta ttgcaaagcc actttcccaa 5521 cttgagctag aattttgcct aatcggcgtt aatgggataa ttattatctt tttattttta 5581 cttaatcatt ttggtaaaat tttgaaaaat attatgtttt gtgacccttt acttaaaaaa 5641 tgcattttcc cctttttgca aagttctgaa cggtaaccca gcagggtaac caaattatta 5701 tgctcatacg cctaaaatag cctttttttg tatggtttat ttaatcgatg gcaatattta 5761 aaaattaaac ctgttttcat atgtatctat ttcgccgcca aattgccagt tgagtggcaa 5821 tacctcacat tttttccaaa actacaaaac aaactgtggt aacaagaaaa aaagccgtta 5881 tatcttgagt agtgatggac attctaacac ataggcccag tattgtcaag cccatgggct 5941 aatgttcttt tgcacgtgta caaaagtgtg tgtgtgtatg tatttgctca tcactgatct 6001 ggagccatca acggccccga acttagttgc agtgaaaact gtattgggtt gcttgagaga 6061 gcaaaatttt tgaaattgtc tgtgaaacat tctcagtatc tcatttacct tagttgttgt 6121 tgcgcataag tatgaattgg caatattcaa aaaatgaact tgttttcata tgtccctatt 6181 ttgccgccaa attgccagtt gagtagcaat accttagatt ttttccaaaa caacaaaaca 6241 aactgtggta acaagaaaaa agagcagtga tggggactaa cacataggcc cagcattgtc 6301 aagcccatga gctaatgttc ttgtgtgtgg tgtgtgtgta tttgctcatc attgatctga 6361 agccatcaac gcccccactc agttatagtg aaaattgtat gggtttgctt gagagagcaa 6421 aatttttaaa attgtctatg aaacattctc actctctcat ttaccttagt ggttgttgcg 6481 cataagtatg cattgcaatc gcaaagccca tcacaagaca tattggttgg ccgaaatttc 6541 ttgtttgtat aggtaatttt gtatactttt cacagcatat gaatggggaa accctttaat 6601 gatgagtaca caaataagaa cctctttcat aagcttggta tatgtatttt aaaataagaa 6661 aacagctgat ttgtatacct caagcggaca aaaggtattt gtacaagggc aacttagctt 6721 tggtagaaac aatgagttgt ttaaattctt aaaatattct tttccagtat ctggtatgac 6781 tgtggtggac tacatcatat ttagtttctg taacctcccg ttatatacac caacgaaaac 6841 aacattgtaa attttgggcc tttgtctcgc tatctaatga aagcattgtt aacaattaag 6901 actttggcca gttaatctgc aatatttcct taaagccttg gactggaaat tcacaccata 6961 catgcccaaa tgaaagtact ttttaatgaa tatgccttat atacattaat atttataata 7021 ttaaaaataa aatacctctg aacatttaaa attaattttc tatatatatt ttttttaatt 7081 taattattta attaaaaatt gtttttttgt tttgctatat gacaaacttg ataataataa 7141 taaaaaaaaa gatttttatg aacaatttcg tatgagactt cttaggtgcg tacagagtca 7201 attgcttact attattttcg cttgttttta taaaaaaaaa ttgtaatttt taaaatttct 7261 aaactaaagt tggaataaag aaaaccacaa atcatgatgt atataaacaa atcaaatgaa 7321 attgagaata aaaatagaaa tctgtaacga agaaaaagaa cacaaacaaa aacatatgta 7381 atttaaaaca aaaaccttaa tttaaatgaa agaataattt atttttttat taactaaatt 7441 atataaatca cacacaacca caaacaaata catatacaaa atattatata tgtacgttat 7501 tatatatata ttacactatt ttctataaat ttagaataaa aacaatggca attatttaaa 7561 gaatgagttt attttttttt ataaaacata caatttgtcc tttccgtttt tattttatat 7621 tttaaattga gcaaagtttc atttttttta attttctatt tccagcattc acatttcatc 7681 taaattaaat atttacttta gtaatatttt tttttaaatc atatgtctta gtctattata 7741 tttaaaagta gaggaaaaca tgtatacaac aataagaaaa aaccaataat ttgtcattga 7801 aaaattctca agtgccttaa taatgtttta ttattattat ttttttttaa ttattattat 7861 tattaactat ttatatgtaa tttaatttga ttggtttaat tgaatattat tttgttttta 7921 tttttacaat ttaccttttt tagttattta aatggattta gtcttcccca ctctaatttt 7981 tattatatta tatttctaat ttatatttgt atttttttct cccttgacat agtaatacaa 8041 tacgcgccag ttcgagataa gtcgtcagta gtctttacta tgcactgtgt ttaaaaatac 8101 aaaataaaaa aaaatacgaa ctatgcttcc attttacata tttttacaaa taaaatcgaa 8161 acattgaaac gtaa