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LOCUS XM_013247209 10076 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013247209 VERSION XM_013247209.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247209.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..10076 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..10076 /gene="LOC106083906" /note="protein TIS11; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106083906" CDS 1837..3348 /gene="LOC106083906" /codon_start=1 /product="protein TIS11 isoform X1" /protein_id="XP_013102663.2" /db_xref="GeneID:106083906" /translation="MSAAIVQKSTTTNTTTKTSSNTTAIYFDCGDIFTTNKNIDKPLQ NHHNHHMSNGHINGGSSLSELNIMDINCSNNSSMDHMDQMDQLQQQIQHNSTTSNTNA QTKALNHQYRIHAALTRTISTPQPQIKPPHHLSTLQQHQTQAQSQQQHDPNVAMVNTL IENLGNINLHRKLERTQSEPLPQQVNASRYKTELCRPFEEAGECKYGEKCQFAHGYHE LRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNADEARALQQQQQQQQQQQQQQQQ QFQQPQQQTKLQNHSNYYINNPLSAKSSLNGGAVATAAAAGGINHSLPLSPPLSMSTG SDRESPTGSLSLSPTSSMTNFTFGEQISPANSVFQISFNYGSTPPDSPNEPMSPVNTP PPTHILGAIYSKPLVSNNTNGSGGQVVAAAASSSIAPPCKQLLQKSSSSPIAILRNPN AGVGVGSGATKTTTPTKVNSVSSLNGAVAADEARLPVFNRISSVADTFPHVAL" polyA_site 10076 /gene="LOC106083906" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaaactagt caatttaaaa gaacaaaaca aattgtccta cccggttggt tcgtcaataa 61 taaataactc cagtgcggga ataataaaca actccagtga aaaaaaggaa gtggccattg 121 aaatcaaatt atgttacttt tttatgtgat attaaatttt ataatttgac atctgtacat 181 atatttttta aaaaaaaccg cgcattgcaa caagtaataa ataagacacg aggagaatat 241 tctgacaacc aaagatacaa aagcgaggta agagcatata gtgggctgaa gtggagtcga 301 aaaaaatggg aattttctta ttgctgtctg tttgacatgc aaagcgtaat caaacaaaaa 361 aaacaaaact acttggacta ccaccagcag cggttgcggc gggtcacacg tataaagaaa 421 taccaccact aaactaaact tgagttcata acgaaataaa aacacacagc cagacagcag 481 caccaccgtc acaaaaacaa aaacaacaac aatggcaata acatctgcag cagagcagca 541 ataaccgacg atacgacgaa cccacaaaaa atcaaaaaca caaaagaaat aaagttaagt 601 aaagcaacaa acttcaacgc cactttagtc tcacataaac agtcgaaacg atctgatcga 661 agagagagga aaggaagaaa ggaaaaaggc acgactgcaa agcgacaggc tccagactac 721 aaagaaacaa acaagtgatt actttgtgtt cagaattaga atcgagagaa caacgtgaga 781 agaatcgaaa gggaaacgcg aaacaaagaa aacacgtttg aaacgcgggc agaactacag 841 caaaaaagca ataacaaatc taacgaaaaa aaacacaaaa aatcaaagaa aacaaataaa 901 ataacaagcg attaatttta tgtcttccaa agaatcaaaa caatttcaat tcaataaagg 961 aaataaaaaa aaatcttttt atcttgtgat gtgaggagga gactggaatc ttgtgtgtgt 1021 gtgttttcgt taaaattcct tttcttttcc ctcgcccgct aacatttaaa cattgtcgtc 1081 gccaacgtct tagttgcttg ctcccctcgc ccatttatat atttcgatta ttatagtgtg 1141 agttcaaatg aatgtttgtg tccccacaat tatcattttc atcaaatcga tcgatcgttg 1201 gatggattga catcgtcggt tcggtgtaca acagttgttg ctaaaataca tgcgtaattg 1261 aacatcgggg ttttgaaaca aagtttcgtg tttgaaattg tgagatagaa agaacaaaag 1321 agaacgacac atcattctct cagtgagtgt tatgttctga ttgtttgttg ggcctactac 1381 attgttctac atagcgccaa tgcctccaac ttctctcaac gtggtgtgag aaatcccttg 1441 agaaaaaaac tcttatcgca tcttcttact ttcgttctat cccccacgcg tgctgtataa 1501 taatgcagtt gttataaaaa gtccgcacag acgccagact taaaaaataa agaaaagaaa 1561 aaaagaaatt aatttaaaaa aatacattgc ttttaatcac tgtttaacgt taatttttcg 1621 aagacccata aaataaaaca aaagcagtaa cccagtgtct aaattattta aacagaacta 1681 aacaaaacaa cgaagattgt atatatacat acgtatttac attactaaag agatagttgg 1741 agctgtaaat tattattatt ttttgtggcc aagccaacct gttgcatgtc ttattaaaag 1801 gaacccccgc gcaaacagca aaaaaccgaa acgaaaatgt ctgcagctat tgtgcaaaag 1861 agtaccacca ccaatacaac aacgaaaacc tcatcgaaca ccaccgccat ttatttcgat 1921 tgtggcgaca tatttacaac gaataaaaac attgataaac ctcttcagaa tcatcataat 1981 catcatatgt ctaatggaca tataaatggc ggcagctcat tgtccgaact caacatcatg 2041 gatattaact gttcaaacaa ctcctcaatg gatcatatgg accaaatgga tcagttgcaa 2101 caacaaattc aacacaattc caccacatcg aacacaaatg ctcaaactaa agcgctcaat 2161 catcaatatc gcattcatgc cgctttgact cgcaccatct ctacgcccca gccgcaaatc 2221 aaaccaccac atcatctaag tacattgcaa cagcatcaaa cacaagcaca gtcacaacag 2281 caacatgatc cgaatgtggc aatggtgaat accctaattg agaatttggg caacataaat 2341 ctacatagga agctggaaag aacacaatcg gagccattgc cgcaacaggt taatgcatca 2401 aggtacaaaa ctgaactttg tcgccccttt gaagaagcag gcgaatgcaa gtatggtgaa 2461 aagtgccagt tcgctcatgg ctatcatgaa ttgcgtaacc tacagagaca tcccaagtac 2521 aaaacggaat attgtcgcac tttccatagc gtgggctttt gcccctatgg accacgttgc 2581 cattttgtgc acaacgctga tgaagcgcga gctcttcaac agcagcaaca acagcagcag 2641 cagcaacaac aacaacaaca gcaacaattt caacaaccac aacaacaaac taaattacaa 2701 aatcattcca attattatat aaacaacccc ttgagtgcca aatctagtct caatggagga 2761 gcagtagcaa cagcagcagc agccggcggt atcaatcatt ccctaccgct aagtcctccc 2821 ttgagcatgt ccaccggctc cgatcgcgaa tcaccaactg gctcattgtc actttcgccc 2881 acaagttcca tgacaaattt cacatttggt gaacaaatca gtccagcaaa ttccgtgttt 2941 caaataagct tcaattatgg gagtacacca cccgatagtc ccaatgaacc catgtcgcca 3001 gtgaacacac caccacccac ccatatcttg ggtgccatat atagtaagcc gttggtgtcc 3061 aataacacca atggtagcgg tggtcaggtt gttgctgccg ctgccagctc ctcgattgca 3121 ccaccctgca aacaattgtt gcagaaaagt tccagctctc ccatagcgat tctgaggaac 3181 cctaatgccg gcgttggtgt tggcagtggt gccaccaaaa ctactactcc taccaaagtc 3241 aactctgtgt catcgttgaa tggtgctgtg gcagccgatg aggcacgttt acctgtgttc 3301 aatcgcatta gctcagtagc agatacattt ccccatgtag ctttataaac atctctgtaa 3361 tatagtagtt taatttgatc atatgcatac tttcaaacat atatgtaaca aagaacataa 3421 cgcgtgcgca aacctgcttg cgcgttgacc cagcaactta ccaacaagcg acaaagaaaa 3481 aatctcaata atttcacacc cccacacgac gcatacaaat atttaattga aaccagagac 3541 aattaaaaat tctagttttt tttctttatg catattaata ttaacgaaaa caaaaaatct 3601 tttatgtgta attaattata aaataactac ttttttactt ttttatgcta tcatctctat 3661 tttttaatgt ttttatccat atgcatatat attttacaca gacaccccta tctatatcta 3721 tcaatctaac ttttatatac atctacatat tttgttattt aacaacacaa ttcatttatt 3781 taaacaacaa caaccagtac agacagaact aaccaccaaa caactaaccg acaaccattt 3841 aacaacaatc agcatagacg tacagacagc agacagagac agacagcaaa taactaaaaa 3901 aaatcattaa tttatataca tatctataaa acaaaaacaa aactgatatt tgcatatgca 3961 cacttataaa agaaacaaca acgacaaact gctaaaaaat gtactaaatt attgaaacta 4021 ttattgatga aaaatgttaa gctgttttgt ttttgctctg caaagtagct tttgatattt 4081 atcatgcgat aacatgggga gcacttgcat attgctgctc catataaata cctagtattt 4141 aaaaaaattt gtaacggtat aatgcttggt ttgtttgttt gtctttccat gttgcgtcta 4201 tacgtgctat cggctggcgt cacatgaaat cgataacatt tttagcacta tgccatacaa 4261 aggcgtgtta tcgttttcac atgtaatcga aagcaaagtt acattgcagt gcaaaactaa 4321 gacaactact ctgttataac tattatgcaa acattaacat tcatacaaca tattatagaa 4381 aaatatccat acaaacaaca ttgtatatgt aaacatgtat acacaagcac acgcaacatt 4441 ttaactttat atatacatat tacttattat aattatttaa aacaaaaaaa aaacgcaaca 4501 atttgattat ttatctcaaa aggaaaaaaa aacaagaaaa cacactacta ttataattat 4561 atactattat tatatttact atttataatt tatatctata tatatatata catacacata 4621 tttaatttta cacataatta tccataaaag tggatatgac tttttttgaa aaaacatata 4681 cctattttta aacaaattat ttaaaagaaa aacaaaacca acataaatac acaatgtaaa 4741 tgtaaaactt ctggctgggt tgctttatga tctaaacgat gtaaaaaaga aaaaacaaaa 4801 aaatgtttgc atttattaaa attaatcttt ttatttattt ttttttttct tccttcttaa 4861 cttatttctt agacaaacaa aattttgtaa cttaacaaaa aagcgttaaa gaaaagacat 4921 tcaaacaaaa aaaaagacca gagaatataa gatcttgaaa agaaaagcaa aaaaaaaaaa 4981 acaaatttta agacaaatca ttagatgttt tcaaaaaagc aatggagtga tatttttcaa 5041 aaaaacaaaa actcacaaaa ctaaatgcct aaataaaata agcacacata ttaacagact 5101 ttaaaaagag agtgagagag agagagaaaa aaaaaaacaa acaacgagtt gttaaaatat 5161 caaaagaaat agttgtcata ttgtgccaaa attataacag aaacagttta tttcctccct 5221 catatccctc aaacaagaat tcactaaggg aaacatctta ttttaataac atttaccaac 5281 actaaggagg gaaatattag ttgtctccat ttccatcata ccaggaacat gaatatttta 5341 agagttaaaa aaaaacacca cattgaaaag aaaaagtatg gctaaattac cgcaaacttc 5401 atttctgaat actgaacact tcaaattgtt ttaaaatcga gcttaacatt aagggcccgt 5461 ttttttttaa aaagcttaat gaagccttat aatcagttta cacatcatga tacttggtca 5521 ttgtaataat attggtgaaa tgcgtcacat ggccgaaaaa tctaaatcat ttgatttttt 5581 caatgactgt cgtctatcga ttaccattta cacagaaatg tgtaatcatt aattgacagc 5641 tgttgaaaaa tatgttctgg ccaaaatcaa attataaaaa gagaagaaaa gtttggaaag 5701 taaaataaaa tcaaagaaaa gaaaaaaatc tatacagatg atgagtacga tcatgatgtg 5761 acgcataaac tgccaattat tataggttta tttaacaatt ctataaggga actctctcca 5821 agaaatcaat tccgattcta cattaagttt tgtatataac ggtataagaa cacattgttc 5881 gagaattata aaaggtgatg aaatgttaag ggccgatgtt gaatgtcaaa ccaccatatg 5941 aaatgtcaaa ttttttcttt ctgaatttca gactaactca atttaaacca tgtaaggata 6001 cacaattgag caatgcgttt aagcttttca aaatcaacat cttcgcttta aatgtaacca 6061 ccctttatat agcagatagt taaagcatat tttgcccaat aagggtatag tctgagaaac 6121 ttttgagagc ttttgggttt gatgttaacc agaatgcttt ttatcatctt atttatttat 6181 tggatcacta gtaggcggca aatgggtttg cctatgcatt cgaacagggt agcagctcgt 6241 tctatcgttg tgtaaccaaa ggggcaattt gatacttttt ataaaggttt gcccatttta 6301 gtgacccttt tttgacaaat tatagctcga gtaaggaaat gcaatttgga ttgtcataaa 6361 gtggatgaat gaaactagtt aaaaatattt tgccgtcata taaggtcatg ttttgtagaa 6421 aattggcttg tcgaaaacca gctgtaaaaa ttgctcaaaa attctaaaaa aatatatatg 6481 aatgagattt ctggaaatcg ttctagtatc ttttagcatt taatggtttc tgtattataa 6541 aaaacatggc gataagctta ccacttttgg gaaaagttgc gattttatgt gaaagtcaac 6601 aaaatccact tttcttcgct aaattgtcat aaaatattaa gtaaacgttt ggttttttgt 6661 ttttgtaaac aatttgtggc tgggataata aaaaaaattt atttgtttaa aattttttga 6721 aaaaattaaa atttcttttt ttaatattta atttttttaa cttaagattt taagatttat 6781 atttcaatta tttttgtttt ttttttttca atttaaatac aattttttca agctttaaaa 6841 aagtattttt ggtaaaaaat aattaaatta aaaattcttc aattttttat atttaaaaaa 6901 aatttaacaa aatgctacct caacataatt agccaaaata atcaatatat taaatttctc 6961 aatcgagggt ctggcgttat aatggtttaa gaaaaccttt caaaattcta tttgcataga 7021 aaatttctta attatatata tatattttaa tattactttt tttaatccct taacttctga 7081 cccttgattt ccttttaatt atttaaagca tttatgttgg cttagtattt tttttaaata 7141 ctgaaaaaaa ttaaagcaaa gcaaaggaaa gttgtctgta gcccaaaata gtaggcctat 7201 cgtccttaat gttttttttt ttctaatatc taaccctcaa aaactacaag aaaactcgaa 7261 gtttccagaa ctttacactt gcaagaattt taaaaagatt ttttatttga attttggagc 7321 tttgcaaaat tgctaacttt taccaagaaa ataaccttat aggacaagac ataaatttgt 7381 ttaactagtt tcattcgtcc tattgcaaag ccactttccc aacttgagct agaattttgc 7441 ctaatcggcg ttaatgggat aattattatc tttttatttt tacttaatca ttttggtaaa 7501 attttgaaaa atattatgtt ttgtgaccct ttacttaaaa aatgcatttt cccctttttg 7561 caaagttctg aacggtaacc cagcagggta accaaattat tatgctcata cgcctaaaat 7621 agcctttttt tgtatggttt atttaatcga tggcaatatt taaaaattaa acctgttttc 7681 atatgtatct atttcgccgc caaattgcca gttgagtggc aatacctcac attttttcca 7741 aaactacaaa acaaactgtg gtaacaagaa aaaaagccgt tatatcttga gtagtgatgg 7801 acattctaac acataggccc agtattgtca agcccatggg ctaatgttct tttgcacgtg 7861 tacaaaagtg tgtgtgtgta tgtatttgct catcactgat ctggagccat caacggcccc 7921 gaacttagtt gcagtgaaaa ctgtattggg ttgcttgaga gagcaaaatt tttgaaattg 7981 tctgtgaaac attctcagta tctcatttac cttagttgtt gttgcgcata agtatgaatt 8041 ggcaatattc aaaaaatgaa cttgttttca tatgtcccta ttttgccgcc aaattgccag 8101 ttgagtagca ataccttaga ttttttccaa aacaacaaaa caaactgtgg taacaagaaa 8161 aaagagcagt gatggggact aacacatagg cccagcattg tcaagcccat gagctaatgt 8221 tcttgtgtgt ggtgtgtgtg tatttgctca tcattgatct gaagccatca acgcccccac 8281 tcagttatag tgaaaattgt atgggtttgc ttgagagagc aaaattttta aaattgtcta 8341 tgaaacattc tcactctctc atttacctta gtggttgttg cgcataagta tgcattgcaa 8401 tcgcaaagcc catcacaaga catattggtt ggccgaaatt tcttgtttgt ataggtaatt 8461 ttgtatactt ttcacagcat atgaatgggg aaacccttta atgatgagta cacaaataag 8521 aacctctttc ataagcttgg tatatgtatt ttaaaataag aaaacagctg atttgtatac 8581 ctcaagcgga caaaaggtat ttgtacaagg gcaacttagc tttggtagaa acaatgagtt 8641 gtttaaattc ttaaaatatt cttttccagt atctggtatg actgtggtgg actacatcat 8701 atttagtttc tgtaacctcc cgttatatac accaacgaaa acaacattgt aaattttggg 8761 cctttgtctc gctatctaat gaaagcattg ttaacaatta agactttggc cagttaatct 8821 gcaatatttc cttaaagcct tggactggaa attcacacca tacatgccca aatgaaagta 8881 ctttttaatg aatatgcctt atatacatta atatttataa tattaaaaat aaaatacctc 8941 tgaacattta aaattaattt tctatatata ttttttttaa tttaattatt taattaaaaa 9001 ttgttttttt gttttgctat atgacaaact tgataataat aataaaaaaa aagattttta 9061 tgaacaattt cgtatgagac ttcttaggtg cgtacagagt caattgctta ctattatttt 9121 cgcttgtttt tataaaaaaa aattgtaatt tttaaaattt ctaaactaaa gttggaataa 9181 agaaaaccac aaatcatgat gtatataaac aaatcaaatg aaattgagaa taaaaataga 9241 aatctgtaac gaagaaaaag aacacaaaca aaaacatatg taatttaaaa caaaaacctt 9301 aatttaaatg aaagaataat ttattttttt attaactaaa ttatataaat cacacacaac 9361 cacaaacaaa tacatataca aaatattata tatgtacgtt attatatata tattacacta 9421 ttttctataa atttagaata aaaacaatgg caattattta aagaatgagt ttattttttt 9481 ttataaaaca tacaatttgt cctttccgtt tttattttat attttaaatt gagcaaagtt 9541 tcattttttt taattttcta tttccagcat tcacatttca tctaaattaa atatttactt 9601 tagtaatatt tttttttaaa tcatatgtct tagtctatta tatttaaaag tagaggaaaa 9661 catgtataca acaataagaa aaaaccaata atttgtcatt gaaaaattct caagtgcctt 9721 aataatgttt tattattatt attttttttt aattattatt attattaact atttatatgt 9781 aatttaattt gattggttta attgaatatt attttgtttt tatttttaca atttaccttt 9841 tttagttatt taaatggatt tagtcttccc cactctaatt tttattatat tatatttcta 9901 atttatattt gtattttttt ctcccttgac atagtaatac aatacgcgcc agttcgagat 9961 aagtcgtcag tagtctttac tatgcactgt gtttaaaaat acaaaataaa aaaaaatacg 10021 aactatgctt ccattttaca tatttttaca aataaaatcg aaacattgaa acgtaa