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LOCUS XM_013247202 4385 bp mRNA linear INV 02-SEP-2023 (LOC106083902), transcript variant X8, mRNA. ACCESSION XM_013247202 VERSION XM_013247202.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247202.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4385 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4385 /gene="LOC106083902" /note="syntaxin-binding protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106083902" CDS 711..4121 /gene="LOC106083902" /codon_start=1 /product="syntaxin-binding protein 5 isoform X5" /protein_id="XP_013102656.1" /db_xref="GeneID:106083902" /translation="MKKFTFRGVLDGFRQTVQPQTARQEQEIHETLRPDHFTIRKTFR HGFPYSPTTFAFDPVQRLLVIGDKSGSLRLLGRPGVDTHISHEGESACPVILSEFLVN DGKLVTVTADDTIHLWNIRQKVPQVIQSLKFQRERVTCIHLAVASKWLYVGTEKGNIH VVNIETFALSGYVINWNKAIELARANHPGAVIALCDNPIDANKLLIAYECGLLVLWDL KSKFAEIRWVSSDPVKSIAWHYEGKYFVSSHKDGSICSWPMKPTPKPQSLVYPHAKTS REGTVEKCNPIYKVDLKASQSGETFTIFSGGMPTEKGAKSNCITVMVGKTTTVLEMEH AVVDFITLCENPWTSETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT YCTYLTDCPSDLVPAFYSVGRTTTSKKTGFSEREWPVSGGEWSPASCSYAEIVITGHQ DGTIKFWDSGAGTLQILYKLKTAKIFEKSKSLQTDSGVEHPLAIQLIHLCSVSRRLCV AGAMGQVILFKFRKVETTSDVLVLEIPILFENFDDIYGTSPECDFIPHQVQKTESSES DKTDNLLRVKTGAQRKPPGFQSQLVCLTTGPNKRIVQVTSLCISSTYGLMAYGTEYGL VIIDIIQKVCLLSIACPDLYGAHDPYSRTPKSPKRIETKDQDQSRSPSSDQLCDAEAE PSNCFCAFLRKCFGEKLDGSFSRSRSSSMSSIDMSSAESVTCLAFIESYAKKNDMLSI VPTLWVGTSFGSILTLVVTMPEREVRKSQPVLVTINGGPVLRLKGSITSMSFLDAYGT IIPFSSEPWRDDSRDTKKERTPTKSSSRTSPTFTPTTANTISNTSGGNVSTSASSSGI SGSVSTGLDTIADRQYIVIASEKQTKVFDIANQCCINRIQLSEMDFAVKAKTITMKDG TCLATYLSNGHLMVHSLPSLKLLLDTEFLPLMDLSFQTKCKQGIVDPMLSIWGQQIIV HEDITQISKIFCFSNKGHGLYMASPTEIQKFTISSEFCQFILDMMGSLYTVQEMPEQP KESFFKGLFGGGAKSLDREELFGEQSGKANRSVAKHIPGPTLEQLNQRASTAASEISR AHLLAMERGEKLNMLEERAERMANQAQDFSGTAHQLMLKYKDKKWYQL" misc_feature 864..974 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature <873..1481 /gene="LOC106083902" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 993..1109 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1122..1223 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1407..1487 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1554..1838 /gene="LOC106083902" /note="LLGL2; Region: LLGL; pfam08366" /db_xref="CDD:462446" misc_feature 3915..4097 /gene="LOC106083902" /note="SNARE domain of STXBP5, STXBP6 and related proteins; Region: R-SNARE_STXBP5_6; cd15873" /db_xref="CDD:277226" misc_feature order(3924..3926,3933..3938,3942..3944,3954..3959, 3963..3971,3975..3980,3984..3989,3996..4001,4005..4022, 4026..4043,4047..4064,4068..4076,4080..4085,4092..4094) /gene="LOC106083902" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277226" misc_feature 3996..3998 /gene="LOC106083902" /note="zero layer; other site" /db_xref="CDD:277226" polyA_site 4385 /gene="LOC106083902" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtttagttt tatattatcc tttgaagtct gcggatgtaa ttgtagaatt aaaaaagaag 61 aacaacgcac aaaacctata tctttaccta tacacaaaaa aacaagaaaa aaatttcact 121 ctcatacata catacctaca aacagaattg aaactgaaat tggaaaaaaa aaattcaaaa 181 aaagaaagaa agaaaaaaaa aacgcaaaaa ccccaaaata ttcgaattgt taactaagaa 241 aaaaaaatgt tctagagttt tgtattaaat cttctatgtg aaagagagaa aagaaaaaaa 301 ctatgacaat attttcatgt taaatattgc cccttttttg aatgtgaatg tgtgtggtgt 361 atgtgttttc ttttgcatgg tgcttacaga cagtggtttg aatttttgtg ctggtcataa 421 attcctgtag gaatcgccta aaacgtttcg cttgcgtcgg ggtgctacgc aaaaagattt 481 ttttcgttac atgtgtgaac acaacaaatg gagaataata aattacataa taacggagtg 541 aataatacca aattgaaaga tagtcacaaa aatagtaatt ggtactataa gaaaatttta 601 tgaattcaat gggcaaatgg attatttgta agattggctg ctgcaaactt actgtaaagc 661 tacaagtcct ctacaacaca aattccaaaa aatcattcta tgtgtaaaaa atgaaaaagt 721 tcacatttag aggcgttctt gatggatttc gacaaacggt tcagccgcaa actgcaagac 781 aagagcagga gattcatgag acccttagac cagaccattt tacgataaga aagacctttc 841 gtcatggatt tccctactct ccaacgacat ttgcatttga tccagtacaa aggctgttag 901 ttattggcga caaatcgggc agtctaagat tattgggccg tccgggtgtg gatactcata 961 tcagtcatga aggtgaatct gcatgtcccg taattctatc cgaattttta gtcaatgatg 1021 gaaaattggt aaccgtgacc gcagatgaca caatacattt gtggaatata cgccaaaaag 1081 tacctcaagt catacaaagc ttaaaatttc aacgagaaag agtaacatgc attcacttag 1141 cagtggcaag caaatggctg tatgttggca cagaaaaagg caacattcat gtggtcaaca 1201 tagagacatt tgcccttagc ggttacgtta taaactggaa caaagcaatt gaattggcta 1261 gagctaatca tcctggtgct gtgattgcat tatgtgataa tccaatagat gcaaataagt 1321 tgttgattgc atacgaatgt ggtttgcttg tcctttggga cttgaaatcc aaatttgccg 1381 agatcagatg ggtatcctcg gatccggtga agtcaatagc atggcattat gaaggaaaat 1441 attttgtatc ctcgcataaa gatggttcca tatgttcatg gcctatgaag ccgaccccaa 1501 aacctcaatc tctagtctat cctcatgcca aaacatcgag agagggtacg gttgaaaaat 1561 gcaatccaat ttacaaagtt gatttgaaag cttctcaatc tggagaaacc tttacgattt 1621 tttcgggtgg tatgccaaca gagaagggag caaaatccaa ttgtatcact gttatggtgg 1681 ggaagacaac caccgtctta gaaatggaac atgctgttgt tgattttata acactttgtg 1741 aaaacccttg gactagtgaa acccaagaac catatgcgat agcagtactt ctgcagtatg 1801 atttagtatt aatagactta cttacacccg gttttccatg tttcgaatcg ccttatccca 1861 tggacttaca cgaatcacct gttacatatt gcacttactt aactgattgc ccctcggatt 1921 tggttcctgc tttttactct gttggccgta ctacgacatc taaaaaaact ggtttctccg 1981 aaagagaatg gcctgtatca ggtggagaat ggtcaccagc gtcttgtagt tatgccgaaa 2041 tagtcataac aggtcatcaa gatggcacca taaaattttg ggattctggt gcaggcacat 2101 tacagatttt atataaactg aagacagcaa agatatttga aaaatccaaa tccctacaaa 2161 cagacagcgg tgtggaacat cctctggcaa ttcaattaat acatctttgc tctgtgtcca 2221 gacgtttatg tgttgcgggc gcaatgggcc aagtaatttt gtttaaattt cgcaaagttg 2281 aaaccacttc agacgttttg gttctggaga ttccaatact ctttgagaac tttgatgata 2341 tttatggtac tagtccggaa tgtgatttta taccacatca agttcaaaaa actgaatcaa 2401 gtgaatctga taagacggac aatttactac gagtcaaaac aggagcacaa cgaaagcctc 2461 cagggtttca gtcacagtta gtttgtttaa caactggccc aaataagaga attgttcaag 2521 tcacatcatt atgtatcagt tctacatatg gattaatggc ttatggcacg gaatatggac 2581 ttgttattat cgatattata cagaaagtct gcttattgag cattgcctgt cccgacttgt 2641 atggtgcgca cgatccctat tcgcgaacac ccaaaagtcc caaacgcatt gaaaccaagg 2701 atcaggatca gagtcgctca cccagctccg atcagctgtg cgacgctgaa gcagaaccgt 2761 ccaactgttt ttgtgcattt ttaaggaaat gttttggtga aaaattggat gggtcatttt 2821 caagatctag atcatcgtcg atgtcgagca tcgacatgtc ttccgcagag tctgtaacct 2881 gtttggcttt tattgaaagc tatgccaaaa agaatgacat gctctctata gtcccaactt 2941 tgtgggttgg cacaagtttt ggttccatac taacgctggt cgttaccatg cctgaacgtg 3001 aagtgcgcaa atctcaacca gttttggtca caattaatgg cggtccagta ttacgtctaa 3061 aaggatcaat aacatcaatg tcatttttgg atgcttatgg cacaattata ccattttcct 3121 ctgaaccatg gcgagatgac agtagggata caaaaaaaga acgaacgcca acaaaaagta 3181 gcagtcgaac aagtcctaca tttacaccta caactgccaa tacaatatca aatacatctg 3241 gtggtaatgt gagtaccagt gccagtagca gtggtattag tggaagcgtt agcaccggcc 3301 tagataccat agctgataga caatatatcg taattgcaag cgaaaaacaa actaaagtct 3361 tcgatattgc aaatcaatgt tgtattaatc gcattcaatt atctgaaatg gattttgcgg 3421 ttaaagcaaa aactatcaca atgaaagatg gaacttgcct agcaacctat ctttccaatg 3481 gccatctaat ggtacatagt cttcctagtc taaagttgtt attggataca gagttcttac 3541 cacttatgga cttaagtttt caaaccaaat gcaaacaggg aattgtggat ccaatgcttt 3601 ccatatgggg tcaacaaatc attgttcacg aagatataac acaaatatca aaaatttttt 3661 gcttcagtaa taaaggtcat ggtctgtaca tggcatcacc caccgaaata caaaagttta 3721 caatatcgtc agagttttgt caatttattt tagatatgat gggatcattg tacacggttc 3781 aagagatgcc tgaacagcca aaggagagtt tctttaaagg attatttggt ggcggcgcca 3841 aaagtctgga cagagaagaa ctatttggag aacaaagcgg gaaggcaaac cgttctgtag 3901 ctaaacacat tccgggccca acactcgaac aattgaatca gagagcttca acagcggcat 3961 ccgaaatcag tcgcgcccat ctattggcaa tggaacgcgg cgaaaaactt aatatgctgg 4021 aagagcgagc cgaacgtatg gccaatcaag ctcaagattt cagcggcaca gcgcatcaat 4081 taatgcttaa atacaaggat aaaaagtggt accagttgta aaatatctat tacaggagcc 4141 aattctacca cagttattgt aatattgctt ttataacaac aacaacaaaa acaacaacaa 4201 caaacacttt ctactacatt aaagtacact tatttaattt ctgttttcaa atcgtcatgt 4261 tatttatata ttaaaaaaaa aaacaaaaac aaaaaaccaa caaaaaacaa agtaaaaata 4321 tattaaacta caacaaaatg tttttaataa aatatagacc aataaaacgt gttacagatt 4381 tacaa