Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013247199 4869 bp mRNA linear INV 02-SEP-2023 (LOC106083902), transcript variant X5, mRNA. ACCESSION XM_013247199 VERSION XM_013247199.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247199.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4869 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4869 /gene="LOC106083902" /note="syntaxin-binding protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083902" CDS 716..4837 /gene="LOC106083902" /codon_start=1 /product="syntaxin-binding protein 5 isoform X2" /protein_id="XP_013102653.1" /db_xref="GeneID:106083902" /translation="MKKFTFRGVLDGFRQTVQPQTARQEQEIHETLRPDHFTIRKTFR HGFPYSPTTFAFDPVQRLLVIGDKSGSLRLLGRPGVDTHISHEGESACPVILSEFLVN DGKLVTVTADDTIHLWNIRQKVPQVIQSLKFQRERVTCIHLAVASKWLYVGTEKGNIH VVNIETFALSGYVINWNKAIELARANHPGAVIALCDNPIDANKLLIAYECGLLVLWDL KSKFAEIRWVSSDPVKSIAWHYEGKYFVSSHKDGSICSWPMKPTPKPQSLVYPHAKTS REGTVEKCNPIYKVDLKASQSGETFTIFSGGMPTEKGAKSNCITVMVGKTTTVLEMEH AVVDFITLCENPWTSETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT YCTYLTDCPSDLVPAFYSVGRTTTSKKTGFSEREWPVSGGEWSPASCSYAEIVITGHQ DGTIKFWDSGAGTLQILYKLKTAKIFEKSKSLQTDSGVEHPLAIQLIHLCSVSRRLCV AGAMGQVILFKFRKVETTSDVLVLEIPILFENFDDIYGTSPECDFIPHQVQKTESSES DKTDNLLRVKTGAQRKPPGFQSQLVCLTTGPNKRIVQVTSLCISSTYGLMAYGTEYGL VIIDIIQKVCLLSIACPDLYGAHDPYSRTPKSPKRIETKDQDQSRSPSSDQLHDTTSP DSPSIEYIAEGNESNPDQSNPSSRPASPDEDKGAVGGMPAKSPMRDEVSIPPKELPDR RKSMSWKTFNLKRQLSKVNMKIGLNMGGDSEATPKSTSVFYTQTECSGENSDDSPPKD PIAMGVECRESMTETNLREALEAAGDSGNVGEGDSGSDVPPPLPSRRVDFTSDSEGGQ QSTRPNNLPISSTAGGGDPNVPPPRPPRQKLKEKRDQRLLSVPNIKYQVREARLRPNR NDSSPSLGAAGGNAVTKKSQKLDGSFSRSRSSSMSSIDMSSAESVTCLAFIESYAKKN DMLSIVPTLWVGTSFGSILTLVVTMPEREVRKSQPVLVTINGGPVLRLKGSITSMSFL DAYGTIIPFSSEPWRDDSRDTKKERTPTKSSSRTSPTFTPTTANTISNTSGGNVSTSA SSSGISGSVSTGLDTIADRQYIVIASEKQTKVFDIANQCCINRIQLSEMDFAVKAKTI TMKDGTCLATYLSNGHLMVHSLPSLKLLLDTEFLPLMDLSFQTKCKQGIVDPMLSIWG QQIIVHEDITQISKIFCFSNKGHGLYMASPTEIQKFTISSEFCQSILDMMGTLYTVQE MPKQPKENFFKGLFGSSTKSLDREELFGEQSGKGNRYVAKHIPGPTLEQLDQRPSTAA SEIGRAHLLAVERGEKLNMMEERAERMANQAQNFNSTASQLVRKYKDKKWYEL" misc_feature 869..979 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature <878..1486 /gene="LOC106083902" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 998..1114 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1127..1228 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1412..1492 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1559..1843 /gene="LOC106083902" /note="LLGL2; Region: LLGL; pfam08366" /db_xref="CDD:462446" misc_feature 4631..4813 /gene="LOC106083902" /note="SNARE domain of STXBP5, STXBP6 and related proteins; Region: R-SNARE_STXBP5_6; cd15873" /db_xref="CDD:277226" misc_feature order(4640..4642,4649..4654,4658..4660,4670..4675, 4679..4687,4691..4696,4700..4705,4712..4717,4721..4738, 4742..4759,4763..4780,4784..4792,4796..4801,4808..4810) /gene="LOC106083902" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277226" misc_feature 4712..4714 /gene="LOC106083902" /note="zero layer; other site" /db_xref="CDD:277226" ORIGIN 1 gttaacgttt agttttatat tatcctttga agtctgcgga tgtaattgta gaattaaaaa 61 agaagaacaa cgcacaaaac ctatatcttt acctatacac aaaaaaacaa gaaaaaaatt 121 tcactctcat acatacatac ctacaaacag aattgaaact gaaattggaa aaaaaaaatt 181 caaaaaaaga aagaaagaaa aaaaaaacgc aaaaacccca aaatattcga attgttaact 241 aagaaaaaaa aatgttctag agttttgtat taaatcttct atgtgaaaga gagaaaagaa 301 aaaaactatg acaatatttt catgttaaat attgcccctt ttttgaatgt gaatgtgtgt 361 ggtgtatgtg ttttcttttg catggtgctt acagacagtg gtttgaattt ttgtgctggt 421 cataaattcc tgtaggaatc gcctaaaacg tttcgcttgc gtcggggtgc tacgcaaaaa 481 gatttttttc gttacatgtg tgaacacaac aaatggagaa taataaatta cataataacg 541 gagtgaataa taccaaattg aaagatagtc acaaaaatag taattggtac tataagaaaa 601 ttttatgaat tcaatgggca aatggattat ttgtaagatt ggctgctgca aacttactgt 661 aaagctacaa gtcctctaca acacaaattc caaaaaatca ttctatgtgt aaaaaatgaa 721 aaagttcaca tttagaggcg ttcttgatgg atttcgacaa acggttcagc cgcaaactgc 781 aagacaagag caggagattc atgagaccct tagaccagac cattttacga taagaaagac 841 ctttcgtcat ggatttccct actctccaac gacatttgca tttgatccag tacaaaggct 901 gttagttatt ggcgacaaat cgggcagtct aagattattg ggccgtccgg gtgtggatac 961 tcatatcagt catgaaggtg aatctgcatg tcccgtaatt ctatccgaat ttttagtcaa 1021 tgatggaaaa ttggtaaccg tgaccgcaga tgacacaata catttgtgga atatacgcca 1081 aaaagtacct caagtcatac aaagcttaaa atttcaacga gaaagagtaa catgcattca 1141 cttagcagtg gcaagcaaat ggctgtatgt tggcacagaa aaaggcaaca ttcatgtggt 1201 caacatagag acatttgccc ttagcggtta cgttataaac tggaacaaag caattgaatt 1261 ggctagagct aatcatcctg gtgctgtgat tgcattatgt gataatccaa tagatgcaaa 1321 taagttgttg attgcatacg aatgtggttt gcttgtcctt tgggacttga aatccaaatt 1381 tgccgagatc agatgggtat cctcggatcc ggtgaagtca atagcatggc attatgaagg 1441 aaaatatttt gtatcctcgc ataaagatgg ttccatatgt tcatggccta tgaagccgac 1501 cccaaaacct caatctctag tctatcctca tgccaaaaca tcgagagagg gtacggttga 1561 aaaatgcaat ccaatttaca aagttgattt gaaagcttct caatctggag aaacctttac 1621 gattttttcg ggtggtatgc caacagagaa gggagcaaaa tccaattgta tcactgttat 1681 ggtggggaag acaaccaccg tcttagaaat ggaacatgct gttgttgatt ttataacact 1741 ttgtgaaaac ccttggacta gtgaaaccca agaaccatat gcgatagcag tacttctgca 1801 gtatgattta gtattaatag acttacttac acccggtttt ccatgtttcg aatcgcctta 1861 tcccatggac ttacacgaat cacctgttac atattgcact tacttaactg attgcccctc 1921 ggatttggtt cctgcttttt actctgttgg ccgtactacg acatctaaaa aaactggttt 1981 ctccgaaaga gaatggcctg tatcaggtgg agaatggtca ccagcgtctt gtagttatgc 2041 cgaaatagtc ataacaggtc atcaagatgg caccataaaa ttttgggatt ctggtgcagg 2101 cacattacag attttatata aactgaagac agcaaagata tttgaaaaat ccaaatccct 2161 acaaacagac agcggtgtgg aacatcctct ggcaattcaa ttaatacatc tttgctctgt 2221 gtccagacgt ttatgtgttg cgggcgcaat gggccaagta attttgttta aatttcgcaa 2281 agttgaaacc acttcagacg ttttggttct ggagattcca atactctttg agaactttga 2341 tgatatttat ggtactagtc cggaatgtga ttttatacca catcaagttc aaaaaactga 2401 atcaagtgaa tctgataaga cggacaattt actacgagtc aaaacaggag cacaacgaaa 2461 gcctccaggg tttcagtcac agttagtttg tttaacaact ggcccaaata agagaattgt 2521 tcaagtcaca tcattatgta tcagttctac atatggatta atggcttatg gcacggaata 2581 tggacttgtt attatcgata ttatacagaa agtctgctta ttgagcattg cctgtcccga 2641 cttgtatggt gcgcacgatc cctattcgcg aacacccaaa agtcccaaac gcattgaaac 2701 caaggatcag gatcagagtc gctcacccag ctccgatcag cttcacgaca ccacaagccc 2761 cgatagtcca tcgatcgaat acatagctga aggcaatgaa tcgaatccgg atcaatcgaa 2821 tccttcatca cgcccagcct cgccggatga ggataaaggt gcagtgggcg gcatgccagc 2881 caagagtccc atgcgcgacg aagtgtcaat tccccccaaa gaacttccgg acagacgcaa 2941 gtccatgtcc tggaagacat tcaacttgaa acgtcaatta tctaaagtca atatgaaaat 3001 cggccttaat atgggtggcg acagtgaggc gaccccaaag agtacatcag tgttttacac 3061 tcaaacggaa tgttccggcg aaaacagcga cgattcgccg cccaaggatc ccatagcaat 3121 gggggttgaa tgtcgcgaga gcatgacaga aacgaattta cgcgaagctc tagaggctgc 3181 cggagatagt gggaacgttg gtgagggtga cagtggcagt gatgtaccac cacctttgcc 3241 aagcaggcgt gtcgatttta ccagcgattc cgaaggtggc caacagagca ctagaccaaa 3301 taatttgcca atctcatcga cagcgggtgg tggagatccc aatgtaccgc caccacgacc 3361 accgcgccaa aaactcaaag agaaaagaga tcaacgtctg ctctcggttc ccaatataaa 3421 atatcaagtg cgtgaggcac ggctgcgccc caatcgcaat gactcgtcgc cttcgctggg 3481 tgccgccggt ggtaacgccg taactaaaaa atcgcaaaaa ttggatgggt cattttcaag 3541 atctagatca tcgtcgatgt cgagcatcga catgtcttcc gcagagtctg taacctgttt 3601 ggcttttatt gaaagctatg ccaaaaagaa tgacatgctc tctatagtcc caactttgtg 3661 ggttggcaca agttttggtt ccatactaac gctggtcgtt accatgcctg aacgtgaagt 3721 gcgcaaatct caaccagttt tggtcacaat taatggcggt ccagtattac gtctaaaagg 3781 atcaataaca tcaatgtcat ttttggatgc ttatggcaca attataccat tttcctctga 3841 accatggcga gatgacagta gggatacaaa aaaagaacga acgccaacaa aaagtagcag 3901 tcgaacaagt cctacattta cacctacaac tgccaataca atatcaaata catctggtgg 3961 taatgtgagt accagtgcca gtagcagtgg tattagtgga agcgttagca ccggcctaga 4021 taccatagct gatagacaat atatcgtaat tgcaagcgaa aaacaaacta aagtcttcga 4081 tattgcaaat caatgttgta ttaatcgcat tcaattatct gaaatggatt ttgcggttaa 4141 agcaaaaact atcacaatga aagatggaac ttgcctagca acctatcttt ccaatggcca 4201 tctaatggta catagtcttc ctagtctaaa gttgttattg gatacagagt tcttaccact 4261 tatggactta agttttcaaa ccaaatgcaa acagggaatt gtggatccaa tgctttccat 4321 atggggtcaa caaatcattg ttcacgaaga tataacacaa atatcaaaaa ttttttgctt 4381 cagtaataaa ggtcatggtc tgtacatggc atcacccacc gaaatacaaa agtttacaat 4441 atcgtcagag ttttgtcaat ctattttaga tatgatggga acattgtaca cggtccaaga 4501 gatgcctaaa cagccaaagg agaatttctt taaaggatta tttggtagca gcaccaaaag 4561 tcttgacaga gaggaactat ttggagaaca gagtggaaag ggaaatcgtt atgttgctaa 4621 gcacattccg ggcccaacac tcgaacaact ggatcaaagg ccttcaacag cggcatccga 4681 aataggtcga gcacatcttt tggcagtgga acgtggcgaa aaacttaaca tgatggaaga 4741 gcgagccgaa cgtatggcca atcaagctca gaattttaac agcacagcga gtcaattggt 4801 ccgtaaatac aaggataaaa agtggtacga attgtaaaat ttctaatgca gaagccaatt 4861 ctactacat