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LOCUS XM_013247195 5098 bp mRNA linear INV 02-SEP-2023 (LOC106083902), transcript variant X1, mRNA. ACCESSION XM_013247195 VERSION XM_013247195.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247195.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5098 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5098 /gene="LOC106083902" /note="syntaxin-binding protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106083902" CDS 713..4834 /gene="LOC106083902" /codon_start=1 /product="syntaxin-binding protein 5 isoform X1" /protein_id="XP_013102649.1" /db_xref="GeneID:106083902" /translation="MKKFTFRGVLDGFRQTVQPQTARQEQEIHETLRPDHFTIRKTFR HGFPYSPTTFAFDPVQRLLVIGDKSGSLRLLGRPGVDTHISHEGESACPVILSEFLVN DGKLVTVTADDTIHLWNIRQKVPQVIQSLKFQRERVTCIHLAVASKWLYVGTEKGNIH VVNIETFALSGYVINWNKAIELARANHPGAVIALCDNPIDANKLLIAYECGLLVLWDL KSKFAEIRWVSSDPVKSIAWHYEGKYFVSSHKDGSICSWPMKPTPKPQSLVYPHAKTS REGTVEKCNPIYKVDLKASQSGETFTIFSGGMPTEKGAKSNCITVMVGKTTTVLEMEH AVVDFITLCENPWTSETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT YCTYLTDCPSDLVPAFYSVGRTTTSKKTGFSEREWPVSGGEWSPASCSYAEIVITGHQ DGTIKFWDSGAGTLQILYKLKTAKIFEKSKSLQTDSGVEHPLAIQLIHLCSVSRRLCV AGAMGQVILFKFRKVETTSDVLVLEIPILFENFDDIYGTSPECDFIPHQVQKTESSES DKTDNLLRVKTGAQRKPPGFQSQLVCLTTGPNKRIVQVTSLCISSTYGLMAYGTEYGL VIIDIIQKVCLLSIACPDLYGAHDPYSRTPKSPKRIETKDQDQSRSPSSDQLHDTTSP DSPSIEYIAEGNESNPDQSNPSSRPASPDEDKGAVGGMPAKSPMRDEVSIPPKELPDR RKSMSWKTFNLKRQLSKVNMKIGLNMGGDSEATPKSTSVFYTQTECSGENSDDSPPKD PIAMGVECRESMTETNLREALEAAGDSGNVGEGDSGSDVPPPLPSRRVDFTSDSEGGQ QSTRPNNLPISSTAGGGDPNVPPPRPPRQKLKEKRDQRLLSVPNIKYQVREARLRPNR NDSSPSLGAAGGNAVTKKSQKLDGSFSRSRSSSMSSIDMSSAESVTCLAFIESYAKKN DMLSIVPTLWVGTSFGSILTLVVTMPEREVRKSQPVLVTINGGPVLRLKGSITSMSFL DAYGTIIPFSSEPWRDDSRDTKKERTPTKSSSRTSPTFTPTTANTISNTSGGNVSTSA SSSGISGSVSTGLDTIADRQYIVIASEKQTKVFDIANQCCINRIQLSEMDFAVKAKTI TMKDGTCLATYLSNGHLMVHSLPSLKLLLDTEFLPLMDLSFQTKCKQGIVDPMLSIWG QQIIVHEDITQISKIFCFSNKGHGLYMASPTEIQKFTISSEFCQFILDMMGSLYTVQE MPEQPKESFFKGLFGGGAKSLDREELFGEQSGKANRSVAKHIPGPTLEQLNQRASTAA SEISRAHLLAMERGEKLNMLEERAERMANQAQDFSGTAHQLMLKYKDKKWYQL" misc_feature 866..976 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature <875..1483 /gene="LOC106083902" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 995..1111 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1124..1225 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1409..1489 /gene="LOC106083902" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1556..1840 /gene="LOC106083902" /note="LLGL2; Region: LLGL; pfam08366" /db_xref="CDD:462446" misc_feature 4628..4810 /gene="LOC106083902" /note="SNARE domain of STXBP5, STXBP6 and related proteins; Region: R-SNARE_STXBP5_6; cd15873" /db_xref="CDD:277226" misc_feature order(4637..4639,4646..4651,4655..4657,4667..4672, 4676..4684,4688..4693,4697..4702,4709..4714,4718..4735, 4739..4756,4760..4777,4781..4789,4793..4798,4805..4807) /gene="LOC106083902" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277226" misc_feature 4709..4711 /gene="LOC106083902" /note="zero layer; other site" /db_xref="CDD:277226" polyA_site 5098 /gene="LOC106083902" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacgtttagt tttatattat cctttgaagt ctgcggatgt aattgtagaa ttaaaaaaga 61 agaacaacgc acaaaaccta tatctttacc tatacacaaa aaaacaagaa aaaaatttca 121 ctctcataca tacataccta caaacagaat tgaaactgaa attggaaaaa aaaaattcaa 181 aaaaagaaag aaagaaaaaa aaaacgcaaa aaccccaaaa tattcgaatt gttaactaag 241 aaaaaaaaat gttctagagt tttgtattaa atcttctatg tgaaagagag aaaagaaaaa 301 aactatgaca atattttcat gttaaatatt gccccttttt tgaatgtgaa tgtgtgtggt 361 gtatgtgttt tcttttgcat ggtgcttaca gacagtggtt tgaatttttg tgctggtcat 421 aaattcctgt aggaatcgcc taaaacgttt cgcttgcgtc ggggtgctac gcaaaaagat 481 ttttttcgtt acatgtgtga acacaacaaa tggagaataa taaattacat aataacggag 541 tgaataatac caaattgaaa gatagtcaca aaaatagtaa ttggtactat aagaaaattt 601 tatgaattca atgggcaaat ggattatttg taagattggc tgctgcaaac ttactgtaaa 661 gctacaagtc ctctacaaca caaattccaa aaaatcattc tatgtgtaaa aaatgaaaaa 721 gttcacattt agaggcgttc ttgatggatt tcgacaaacg gttcagccgc aaactgcaag 781 acaagagcag gagattcatg agacccttag accagaccat tttacgataa gaaagacctt 841 tcgtcatgga tttccctact ctccaacgac atttgcattt gatccagtac aaaggctgtt 901 agttattggc gacaaatcgg gcagtctaag attattgggc cgtccgggtg tggatactca 961 tatcagtcat gaaggtgaat ctgcatgtcc cgtaattcta tccgaatttt tagtcaatga 1021 tggaaaattg gtaaccgtga ccgcagatga cacaatacat ttgtggaata tacgccaaaa 1081 agtacctcaa gtcatacaaa gcttaaaatt tcaacgagaa agagtaacat gcattcactt 1141 agcagtggca agcaaatggc tgtatgttgg cacagaaaaa ggcaacattc atgtggtcaa 1201 catagagaca tttgccctta gcggttacgt tataaactgg aacaaagcaa ttgaattggc 1261 tagagctaat catcctggtg ctgtgattgc attatgtgat aatccaatag atgcaaataa 1321 gttgttgatt gcatacgaat gtggtttgct tgtcctttgg gacttgaaat ccaaatttgc 1381 cgagatcaga tgggtatcct cggatccggt gaagtcaata gcatggcatt atgaaggaaa 1441 atattttgta tcctcgcata aagatggttc catatgttca tggcctatga agccgacccc 1501 aaaacctcaa tctctagtct atcctcatgc caaaacatcg agagagggta cggttgaaaa 1561 atgcaatcca atttacaaag ttgatttgaa agcttctcaa tctggagaaa cctttacgat 1621 tttttcgggt ggtatgccaa cagagaaggg agcaaaatcc aattgtatca ctgttatggt 1681 ggggaagaca accaccgtct tagaaatgga acatgctgtt gttgatttta taacactttg 1741 tgaaaaccct tggactagtg aaacccaaga accatatgcg atagcagtac ttctgcagta 1801 tgatttagta ttaatagact tacttacacc cggttttcca tgtttcgaat cgccttatcc 1861 catggactta cacgaatcac ctgttacata ttgcacttac ttaactgatt gcccctcgga 1921 tttggttcct gctttttact ctgttggccg tactacgaca tctaaaaaaa ctggtttctc 1981 cgaaagagaa tggcctgtat caggtggaga atggtcacca gcgtcttgta gttatgccga 2041 aatagtcata acaggtcatc aagatggcac cataaaattt tgggattctg gtgcaggcac 2101 attacagatt ttatataaac tgaagacagc aaagatattt gaaaaatcca aatccctaca 2161 aacagacagc ggtgtggaac atcctctggc aattcaatta atacatcttt gctctgtgtc 2221 cagacgttta tgtgttgcgg gcgcaatggg ccaagtaatt ttgtttaaat ttcgcaaagt 2281 tgaaaccact tcagacgttt tggttctgga gattccaata ctctttgaga actttgatga 2341 tatttatggt actagtccgg aatgtgattt tataccacat caagttcaaa aaactgaatc 2401 aagtgaatct gataagacgg acaatttact acgagtcaaa acaggagcac aacgaaagcc 2461 tccagggttt cagtcacagt tagtttgttt aacaactggc ccaaataaga gaattgttca 2521 agtcacatca ttatgtatca gttctacata tggattaatg gcttatggca cggaatatgg 2581 acttgttatt atcgatatta tacagaaagt ctgcttattg agcattgcct gtcccgactt 2641 gtatggtgcg cacgatccct attcgcgaac acccaaaagt cccaaacgca ttgaaaccaa 2701 ggatcaggat cagagtcgct cacccagctc cgatcagctt cacgacacca caagccccga 2761 tagtccatcg atcgaataca tagctgaagg caatgaatcg aatccggatc aatcgaatcc 2821 ttcatcacgc ccagcctcgc cggatgagga taaaggtgca gtgggcggca tgccagccaa 2881 gagtcccatg cgcgacgaag tgtcaattcc ccccaaagaa cttccggaca gacgcaagtc 2941 catgtcctgg aagacattca acttgaaacg tcaattatct aaagtcaata tgaaaatcgg 3001 ccttaatatg ggtggcgaca gtgaggcgac cccaaagagt acatcagtgt tttacactca 3061 aacggaatgt tccggcgaaa acagcgacga ttcgccgccc aaggatccca tagcaatggg 3121 ggttgaatgt cgcgagagca tgacagaaac gaatttacgc gaagctctag aggctgccgg 3181 agatagtggg aacgttggtg agggtgacag tggcagtgat gtaccaccac ctttgccaag 3241 caggcgtgtc gattttacca gcgattccga aggtggccaa cagagcacta gaccaaataa 3301 tttgccaatc tcatcgacag cgggtggtgg agatcccaat gtaccgccac cacgaccacc 3361 gcgccaaaaa ctcaaagaga aaagagatca acgtctgctc tcggttccca atataaaata 3421 tcaagtgcgt gaggcacggc tgcgccccaa tcgcaatgac tcgtcgcctt cgctgggtgc 3481 cgccggtggt aacgccgtaa ctaaaaaatc gcaaaaattg gatgggtcat tttcaagatc 3541 tagatcatcg tcgatgtcga gcatcgacat gtcttccgca gagtctgtaa cctgtttggc 3601 ttttattgaa agctatgcca aaaagaatga catgctctct atagtcccaa ctttgtgggt 3661 tggcacaagt tttggttcca tactaacgct ggtcgttacc atgcctgaac gtgaagtgcg 3721 caaatctcaa ccagttttgg tcacaattaa tggcggtcca gtattacgtc taaaaggatc 3781 aataacatca atgtcatttt tggatgctta tggcacaatt ataccatttt cctctgaacc 3841 atggcgagat gacagtaggg atacaaaaaa agaacgaacg ccaacaaaaa gtagcagtcg 3901 aacaagtcct acatttacac ctacaactgc caatacaata tcaaatacat ctggtggtaa 3961 tgtgagtacc agtgccagta gcagtggtat tagtggaagc gttagcaccg gcctagatac 4021 catagctgat agacaatata tcgtaattgc aagcgaaaaa caaactaaag tcttcgatat 4081 tgcaaatcaa tgttgtatta atcgcattca attatctgaa atggattttg cggttaaagc 4141 aaaaactatc acaatgaaag atggaacttg cctagcaacc tatctttcca atggccatct 4201 aatggtacat agtcttccta gtctaaagtt gttattggat acagagttct taccacttat 4261 ggacttaagt tttcaaacca aatgcaaaca gggaattgtg gatccaatgc tttccatatg 4321 gggtcaacaa atcattgttc acgaagatat aacacaaata tcaaaaattt tttgcttcag 4381 taataaaggt catggtctgt acatggcatc acccaccgaa atacaaaagt ttacaatatc 4441 gtcagagttt tgtcaattta ttttagatat gatgggatca ttgtacacgg ttcaagagat 4501 gcctgaacag ccaaaggaga gtttctttaa aggattattt ggtggcggcg ccaaaagtct 4561 ggacagagaa gaactatttg gagaacaaag cgggaaggca aaccgttctg tagctaaaca 4621 cattccgggc ccaacactcg aacaattgaa tcagagagct tcaacagcgg catccgaaat 4681 cagtcgcgcc catctattgg caatggaacg cggcgaaaaa cttaatatgc tggaagagcg 4741 agccgaacgt atggccaatc aagctcaaga tttcagcggc acagcgcatc aattaatgct 4801 taaatacaag gataaaaagt ggtaccagtt gtaaaatatc tattacagga gccaattcta 4861 ccacagttat tgtaatattg cttttataac aacaacaaca aaaacaacaa caacaaacac 4921 tttctactac attaaagtac acttatttaa tttctgtttt caaatcgtca tgttatttat 4981 atattaaaaa aaaaaacaaa aacaaaaaac caacaaaaaa caaagtaaaa atatattaaa 5041 ctacaacaaa atgtttttaa taaaatatag accaataaaa cgtgttacag atttacaa