Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013247190 1862 bp mRNA linear INV 02-SEP-2023 (LOC106083895), mRNA. ACCESSION XM_013247190 VERSION XM_013247190.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247190.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1862 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1862 /gene="LOC106083895" /note="E3 ubiquitin-protein ligase TRAIP; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:106083895" CDS 253..1254 /gene="LOC106083895" /codon_start=1 /product="E3 ubiquitin-protein ligase TRAIP" /protein_id="XP_013102644.1" /db_xref="GeneID:106083895" /translation="MSCTICFERFKGSDDLYSTSCGHVYHHQCMQQWKNRSSSCPQCR VKNPMTHKIFLELDDFEANNKRQLEAELKTCHLKIEKLEQKLRKRPPVQRSPNSLLNE LEDTLDYMLARNADNVEQLKTSGTKLTELQNICSAHERTVSSLTSSLFAVTLEKNEVT KKYNDLRNLCTRYHNSGQIVITAQSGCIYDLIRQTSILISGAVLRPSSKLLNYVLYLC RKINLNFTRQDIVRAGKYDGDDIIVQFRFPHLKTAFADSEHELDFYPETEEIEFFDVT GNIYYDNLFEYALNLKLFGYKSVFRRADKIFTCRTGNDDDTRLYCKEQIDELINEVK" misc_feature 259..384 /gene="LOC106083895" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order(259..261,268..270,313..315,319..321,328..330, 337..339,370..372,379..381) /gene="LOC106083895" /note="cross-brace motif; other site" /db_xref="CDD:438111" polyA_site 1862 /gene="LOC106083895" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attggccaat gtaaacgtac atttgcactg gatagaaata aaaaaaaact cagcaatatt 61 acaatggcca caaggtttga tgtgccatgc aaacctccct tgatgtgcaa tgtaaactga 121 gcattaattt cttcttccaa aaagtcaatt gacatttaat gccgccattg gttttaaatt 181 gcgaaaacac agcgtataca ttaatttcaa ggagattcaa acaaaacgaa ataggcttat 241 cagcaaataa aaatgtcttg cactatttgt tttgaacgtt tcaaaggttc agacgatctt 301 tattcaacgt catgtgggca cgtctaccat caccaatgca tgcagcagtg gaaaaatcga 361 agttccagtt gtcctcagtg ccgtgttaaa aaccctatga cgcataaaat tttcctggaa 421 ctggatgatt ttgaggcaaa taataagaga caactagaag cagaactaaa aacttgccat 481 ttaaaaattg aaaaattaga gcagaaactc agaaagcgtc caccggttca acgaagccct 541 aatagtttat tgaatgaatt ggaggatacc ttagactata tgctagctcg caatgcggac 601 aatgtagagc aactaaaaac aagtgggacc aaactaactg aactgcaaaa tatatgcagc 661 gcccacgaaa gaacggtatc gtccctcaca agttctctct tcgcagttac actggagaaa 721 aatgaggtca ccaaaaaata taatgattta agaaatcttt gcactcgcta tcataacagc 781 ggtcaaattg tgattacagc tcaaagtggt tgcatatacg atctcatacg acaaacaagc 841 attttaatat ctggagcagt tctacgtccc tcaagtaaat tgctcaatta tgtactctat 901 ctttgccgca aaattaattt aaacttcaca cgacaggata tagtcagagc aggtaaatat 961 gatggtgacg atataattgt gcagtttcgt tttcctcatt tgaaaacggc attcgctgat 1021 tctgaacatg aactagactt ttatcctgag accgaagaga ttgaattctt tgatgtaacg 1081 ggaaatatat actatgataa tctttttgaa tatgcattga atctaaagtt gtttggttac 1141 aaatcagttt ttcgtcgtgc tgataaaata tttacatgtc gcacgggcaa tgatgacgac 1201 acacgtttat actgtaaaga acaaattgat gaattgatta atgaagtcaa gtagccatat 1261 cagggtaaca cttttattat agaaatttgt tctgctatgt caaaaatgtt gaagaaatgc 1321 tgatgtagtt tcaacattcg ttttcttaac ataggtacat tcgatatttt gtatgtattt 1381 cctttgtatt ttttttatat aatgtataca taatattcaa ttttttttgg tttagtattc 1441 aatttcgtaa gaaattcaca gctaaattgt ttgaattgtg tttttagttt tatataagaa 1501 caaaaaaaac aaaattaata gcattatcat taatataaac aaaaatcttg ttatttcata 1561 tactataccc gtataattat cgtataatta ggattcgtca ggcttttgac atgtttgcat 1621 tactaaccat catttgggat tattttgtta tatttctcag tcgtttagat gttgaaatta 1681 actattgaat gttaaaaacc aaatgatatg tgtattccat atatattttt tccctttatt 1741 ggcaagcaaa ttaaaataat cgattgcagg aactaaatgg ttggcatata cacaagtatc 1801 tatatgtgca ttcaagttgc aagcataaaa tatttaaata aagccgacat acgacctctt 1861 ta