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LOCUS XM_013247144 8967 bp mRNA linear INV 02-SEP-2023 mRNA. ACCESSION XM_013247144 VERSION XM_013247144.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; corrected model. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247144.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..8967 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8967 /gene="LOC106083868" /note="hormone receptor 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106083868" CDS 73..7917 /gene="LOC106083868" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:5560..5562,aa:OTHER) /product="LOW QUALITY PROTEIN: hormone receptor 4" /protein_id="XP_013102598.2" /db_xref="GeneID:106083868" /translation="MSVEQQQQQQQLTAIELTKSNNNNNNNGSSNNNNNNSTISNNNS SNAICNNFSSNSKTTNDLKLNNDFHNFTKAKEEALEKSAQKSPPSSPLKQNGQHYGAA ETNGGDHVKFQASTSQRQHENSKEKKEQKESAEADRASSHRQSQDEGLNNGDEEDEDD EEDEDHTLSTACIIKSPLNKTLLKKCIPNGNGSLSPLPLTTNSNSLSNSNCCCHNEGE FSSTSTSSSSNINDSSTKDLSLAEGSEDKSPPHFDPFTKIPIPTTSSMPTTTNANIKC TKCNNNNNIHYNNYNCYYRKKAARLKPSICRIMTLSRGPYSELDKMSLFQDLKLKRRK IDSRCSSDGESVADTSTSSPDLLAPMSPKMCDSGGGGGGGGGGSGSNVASSMSLVTLT ATTSLTTATTPATCSSTALPQHQVAAEVVVATAKAVAAAVAVKNEQLQQLQQLQQQQQ QQEQTEIHSSSCGMSAASSSASNMMTPPAPVRTSPPMNTAEMAAADSAERRTPSSNRA TPTPPHNNGNASSSTSNGGGSSRASPDSMDDKPTTTSTTSMQMPSANGMHGASTGGGN SGSGSTGSMSVIRSVKEERILASPTRMMAYHQHQLQQQQAQQQQQQQQQQQQQGCKTP TQSQQHVTVLVTPSRIKSEPNQLPPQPSHSPYSTAVSASTTTMSPSLLHTIPTATHNT APTSLLHHHQQQQQQQQQQQQQSQQQQQQQHQPQNPPPPPIVTTHHLHQQLTQPQLRK TSPPHDLQFPPQHHHLLTQSMQHLTQQQQIQLLQQAAAMSRQNNPANRELSPSASMSP SSRHSASKSPQQHLMQQQQQQNAAAGQHMRIKKEPASMQNHVSGFGNTANGPQRHHSP HFMPQQSPNQQQGGQQGPPPPQLPPQALGNMAQALMHPASLQSLRHPNRDAAILFRVK NEVQQHVAAAAAAAAGLPQLMQPGAAAVAAAAAQRMVWVSNARINGVKPEVIGGPMGS IRPGGPGQSPSPHHSSSSASSSSQLSPQTPSQTPPRGTPTVIMGESCGVRTMVWGYEP AAPASSAGSASQSPNHSHHHAPHHMGGHQQMGGGGGLGGPPSSLQSQSHHSSQSSLNT ASSPSAGSLTPTHTPGPSPQNNEEAAQLLLSLGQTRIQDNRPRPPHAFRPPHALNMER LWAGDYSQLPPGQLHALNLSAAQQPWGGGGSSNTTGLGRGLDNPHEPTDEDDQPLVCM ICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFKK CIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKNKQNQQQQQQQQSQQHSPMH QPQGHHQPQLSPHHHQTHLFMPQQQQQQLQHQQFAAAVAAAAHQQQTKLLGEMKPMFL TKEQQAMHSPHHQAQQSPSLGPPQQQGPPPPHLSSPHHPLHASSLGPGGPLHSPVAGG GGNGGGSGGNGPPQQTSHHHAASVAPPQHVAHQPSAASQRPATPQETAMKIPSHLVNG TILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHSLSMIQTLIDCDAMEDIATLPH FSEFLEDKSEISEKLCNIGDSIVHKLVSWTKKLPFYLEIPVEIHTKLLTDKWHEILIL TTAAYQALHGKRHTSSAASSHSNNSASSSTSSNSSASSSSSSPTQHNHNSNSNTSNNN SNNHASSTSPPHITAHPALVHKDDPEFVAEVNAHLSTLQTCLTTLMGQPIAMEQLKLD VGHMVDKMTQITIMFRRIKLKMEEYVCLKVYILLNKAEVELESIQERYIQVLRTFLQH SSPQNPQARLNELLSHIPEIQAAASLLLESKMFYVPFVLNSASIRXQMLQRGLLTIAE QKPPYHRTTGTGTETETETTANEQHHSSSQDPQELRATTKETTAATNDEGHSQQREEK DYQFKCLPIVEMPQIKIERDYDDYEMADEVQENAMETMDTEDVEGSRDMQMQMEESND ENDEERNNLNIKPVPQLLEPTSILKTSLLTGAANTLATLTAAAEQIARMPSLTVSDNT KGQDLSGSAMPSTANAANTIKSYGYYNEENKRLLFSETAGERENSPQLKVQQQQQQQG AEDTRGDNNETPTYTSILQTALMSKRPATLNVASTLQTAMASVTSSSPAAATATSSSS TFSTSANTTFLASGILCSSPGSSASSMSSSSLSSNKTLHVRTPDQVLKTAVTLATLSE ITTQRELQQKQQQQQQQQDLAAAAASKHILVVPQVAPRKMCTLPFKKLNFANVANNTP TPSPLPNTASSNNFSSASFAAATTTTITSSVAAAAAALCNINSATSANNTATNTTTTT AITLNTNKNHFNSFLGSMNMKNNSNSNNNNNNNINLCNNINNNNNQQAASSIIQKTNH NTSSNNVLLAPNNSSSSSGALCPMPLTQSLKIPCPMKPQLVTSQTQTEDVAPKNEEAK STGMATSAICFANTTFSTPPTTSAYSNTNNTSSTSLASSLQTTSLAQAGAGLLRTAVP TTHSKMMNLAQTASTFSSTATTTLSSAPTGIMASSISKAPSCSKSLKAPPNSSVLNVS GSILKNSLTQPLSGPTDKALAMANPLLNNYTATKTQRACNNPTTSCLSSTSSSTSTVN SPATAVTVVVFETLLPED" ORIGIN 1 tttatctcaa atatccaata acaacaacat caaaccataa aaactttgca ttcaacatcc 61 aatttcatcc aaatgagtgt ggaacagcag caacaacaac agcaattgac ggctattgaa 121 ctaaccaaat cgaataacaa taataacaac aacggcagca gcaacaacaa taataacaat 181 tccaccatta gcaacaacaa tagctccaat gcaatatgca ataatttcag ctcaaattct 241 aaaacaacca atgatctaaa gctgaataat gattttcata atttcaccaa agccaaagag 301 gaagccttgg aaaaatctgc ccaaaaatct cccccctcca gtcctttgaa acaaaatggc 361 caacattatg gtgcggccga gaccaatggt ggagatcatg tgaaatttca agccagcact 421 tcacaaaggc aacatgagaa ttccaaggaa aaaaaggaac aaaaagagtc tgcggaggca 481 gacagagcat cgtctcatcg tcaatcgcaa gatgaaggcc tcaataatgg cgacgaagag 541 gatgaagacg atgaggaaga tgaggatcac actttgagta cagcttgcat tataaaatcg 601 cctctcaata aaactctact caagaaatgc atacccaatg gcaatggcag tctcagtccc 661 ttgcccctga ccaccaacag caatagtttg agtaattcca attgctgttg tcacaatgag 721 ggcgaattct catccacctc aacatcatca tcctcaaata tcaatgattc atctactaaa 781 gatttgtccc tggccgaagg cagtgaagat aaatcgccac cacacttcga tccttttacc 841 aaaattccca tacctacaac gtcgtcaatg ccaacaacaa caaatgcaaa cataaagtgt 901 acaaaatgca ataacaacaa caatatacat tacaacaatt acaattgtta ttatcgcaag 961 aaagcggcac gtttgaaacc atcaatatgt cgaattatga cactgagccg tggcccctac 1021 agcgagctcg ataaaatgag cctttttcag gatctaaaac tgaaacgacg aaaaatcgat 1081 tcaagatgca gcagtgatgg tgaatctgta gccgatacct caacctcatc accggatctt 1141 ttggcgccca tgtcacccaa aatgtgtgac tccggaggag gaggtggtgg tggtggtggt 1201 ggtagtggct ccaatgtggc cagctctatg tcattagtca ctctaacggc taccacctct 1261 ctaacaacag ccacaacacc tgccacctgt tccagcacag ccttgcctca gcatcaagtg 1321 gctgccgaag ttgtggtggc cacagcaaag gcggtggctg cggcggttgc tgttaaaaat 1381 gaacaactgc agcaattgca acagctgcag caacagcaac aacaacaaga acagactgaa 1441 attcattcat catcgtgtgg catgtcagcg gcatcctcat cagccagcaa tatgatgaca 1501 cctcctgcgc ctgtaagaac ttctccgcct atgaacactg ccgaaatggc agccgctgat 1561 agtgccgaac gaaggacacc ctcaagtaat agagccacac ccacaccgcc gcataataat 1621 ggcaatgcca gcagtagtac cagcaatgga ggtggcagta gtcgagcttc accggattct 1681 atggatgata agcccacaac aacttcgact acatcaatgc aaatgccctc ggccaatggc 1741 atgcatggcg cttcaacggg tggtggaaat agcggcagcg gcagcacggg tagtatgagt 1801 gtcatacgct ccgttaagga agaacgtata ttggcttcac ccacacgcat gatggcctat 1861 catcaacatc agctgcagca acagcaggca caacagcagc agcagcagca gcaacaacag 1921 caacagcagg gttgcaagac acccacacag tctcaacaac atgtcaccgt tttggtgaca 1981 ccatcccgta ttaagtctga acctaaccaa ttaccgccgc aaccatcaca ttcgccatat 2041 tccacagctg taagtgcatc gaccaccaca atgtcaccct ctttgctgca tacgataccc 2101 acagccaccc ataatacagc gcccaccagc ctacttcatc atcatcaaca gcagcagcag 2161 cagcaacaac aacagcagca gcagtcacag cagcagcaac aacaacaaca ccagccacaa 2221 aatccacctc cacctcctat agtcacaaca catcacctgc accaacagct gacacagcct 2281 cagctgcgca agaccagccc tccccatgat ctgcagtttc ccccgcaaca tcatcatctg 2341 ctgacgcaat cgatgcaaca tctgacgcaa cagcaacaaa tacaactgct gcagcaggcg 2401 gctgccatgt cgcggcaaaa taatcctgcc aacagagagt tatcgcccag tgcctccatg 2461 tcacccagtt caagacactc ggcatcgaag tcgccccagc agcatttaat gcagcagcag 2521 cagcaacaaa acgcagcagc tggccagcat atgcgtatca agaaggagcc tgcgtccatg 2581 caaaatcatg tctccggttt tggcaatacc gccaatgggc cccagagaca tcattcgccg 2641 cacttcatgc cacaacagtc acccaaccag cagcaggggg gccagcaggg cccacctccg 2701 ccacagctgc cgcctcaggc attgggcaac atggctcagg ctctaatgca tccggcctca 2761 ttgcagtcac tgagacatcc caatagggat gctgccattt tatttcgcgt caaaaatgaa 2821 gtgcagcaac atgtggccgc cgcagcagcg gctgctgcgg gtctgcctca gctaatgcaa 2881 cccggcgctg ctgctgtggc tgcagcagcg gctcaacgca tggtctgggt atcgaatgcg 2941 cgtataaatg gcgtaaagcc cgaagtgata ggaggcccca tgggcagcat acgaccgggt 3001 gggccgggcc agtcaccatc accgcatcat tcgtcatcat cggcctcgtc atcatcgcag 3061 ctttcgccgc agacaccctc gcaaacccca ccgcggggca caccgacagt gataatggga 3121 gaaagttgtg gcgtgcgcac catggtctgg ggctatgaac cagcggcgcc tgcctcatcc 3181 gcaggctcag cgagtcagtc acccaaccac tcacatcacc atgcgcccca tcatatgggc 3241 ggccaccaac agatgggagg aggtggaggt ctgggaggac caccctcttc gctgcagtcg 3301 caatcgcatc attcatcaca gtcatcattg aataccgcat cgtcaccttc agccggatct 3361 ctaacgccca cgcatacgcc tggaccatcg ccacaaaaca atgaggaagc agcccagctg 3421 ctgttgtctt tgggtcagac ccgcatacaa gataatcggc caagaccgcc tcatgcattt 3481 cgtcctcccc acgccctgaa catggaacgc ttgtgggcgg gagattattc gcaactgcca 3541 ccaggccaat tgcatgcttt aaacctgagt gcagcgcaac agccttgggg cggtggtggc 3601 tcttcgaata ccaccggcct ggggcgaggt ttggataacc cccatgagcc cacggatgag 3661 gatgatcagc cgctggtgtg tatgatatgt gaggataagg caacgggttt acattatggt 3721 attataacat gtgaagggtg caaaggattc ttcaaacgca ctgtacaaaa tcgcagagtt 3781 tatacatgcg tggccgatgg cacctgtgaa ataaccaaag ctcaacgtaa tcgttgtcag 3841 tattgtcgct tcaagaagtg catagaacaa ggcatggttt tgcaagctgt tcgcgaggat 3901 cgcatgcctg gcggccgcaa tagtggggcc gtctataacc tctacaaggt caaatataag 3961 aaacacaaga agaacaaaca aaatcaacaa cagcagcagc aacaacaatc gcaacagcac 4021 tcacccatgc atcagccaca gggacatcat cagccacaac tatcgccgca tcatcaccaa 4081 acccatctct ttatgccaca acaacagcag caacaattgc agcaccaaca atttgcagcc 4141 gcagtggcgg cagcagccca tcagcaacaa accaaattac tcggtgagat gaaaccgatg 4201 ttcttgacga aagagcagca ggccatgcac tcaccgcacc atcaagctca gcaatcgcct 4261 tcgttgggcc cgccccagca gcagggaccg cctccgccac atttgtcatc accccatcat 4321 ccgctgcatg cctcgtcatt gggccctggt ggtcctctac acagtcccgt ggccggcggt 4381 ggaggcaatg gcggtggtag tggtggcaat ggccctcccc agcagacatc acatcaccat 4441 gccgcctcag tggcgccgcc ccaacatgtg gcccatcagc cttcagcagc ttcacaaaga 4501 cctgccacgc cccaagagac tgccatgaaa ataccctcgc atttggtaaa tggaaccata 4561 ctaaagactg ctctaacaaa tcctagcgag attgttcacc tacggcaccg actcgactca 4621 gcggttagct cctccaaaga tcgccagatc tcatacgagc attctctgtc catgatacaa 4681 actctaatag actgtgacgc catggaagac attgccacac tgccgcattt ctccgaattc 4741 ttggaggaca aatccgagat tagtgaaaaa ctctgcaaca tcggtgactc catagtccac 4801 aagctggtgt cgtggaccaa gaagctgccc ttctatctgg agataccggt ggagatacat 4861 accaaacttt tgaccgacaa atggcatgag atactcatac tgacaacagc agcctatcaa 4921 gccctgcatg gcaaacggca tacatcatct gcggcgtcat cacattcgaa caactcggcc 4981 agcagttcca catcttcgaa ttcttcagcc tcatcctcgt cctcgtcgcc cacacaacac 5041 aatcacaata gtaatagcaa caccagcaac aacaacagca acaatcatgc atcatcaaca 5101 tcacctcccc acataacagc acatcctgcc ttagtacaca aagacgatcc agaatttgtg 5161 gccgaagtca atgcccatct gagtacgctg caaacgtgtc tgacgactct gatgggccag 5221 cccatagcta tggaacagct aaaactcgat gtgggtcata tggtggataa gatgacacag 5281 ataaccatta tgtttagaag aatcaaactt aaaatggaag aatatgtctg tctcaaggtc 5341 tacatattac tgaataaagc agaagtggaa ttggaaagta tacaggaacg ttacatacaa 5401 gtattgcgta catttttaca acattcatcg ccacagaatc cacaagcccg ccttaatgag 5461 ttattgtctc atatacccga gatccaagct gctgctagtc tattattgga aagtaagatg 5521 ttctacgttc cctttgtttt gaactcggcc agtataaggt agcaaatgct tcaacgtggt 5581 ctattgacaa ttgccgagca aaaaccgcct tatcaccgaa caacaggaac gggaaccgaa 5641 accgaaaccg aaacaacagc aaacgaacag catcactcat cgagccaaga cccccaagag 5701 cttagagcaa caacaaagga aaccactgcg gccaccaacg atgagggcca tagtcagcaa 5761 cgggaggaaa aagattatca attcaaatgt ttgcccattg ttgaaatgcc tcagataaaa 5821 atcgaaagag attatgatga ttatgaaatg gctgatgaag tgcaggaaaa tgccatggaa 5881 acaatggata ccgaagatgt tgaaggctcc cgggatatgc aaatgcaaat ggaagagagc 5941 aatgatgaga atgatgaaga gagaaataat ttaaatataa aaccagtgcc tcagttgttg 6001 gaaccaactt caatattaaa gacttctttg ctaacggggg cagccaatac cttggccacc 6061 ttgacagcgg cagcagaaca aatagcccgt atgcccagct tgactgtaag tgataacact 6121 aagggacaag atcttagtgg tagtgcaatg ccaagtacag caaatgcggc gaatacaata 6181 aagtcctatg gttattataa tgaagaaaac aaaagacttt tgtttagtga aacagcaggg 6241 gaaagagaaa actcaccaca acttaaggtg cagcaacagc agcagcaaca gggagcagaa 6301 gacactaggg gggataataa tgaaactccc acatatacat caatattgca aacagcattg 6361 atgtccaaac gtccagcaac attaaatgtt gcctcaacat tacaaacagc aatggcatcg 6421 gtaacatcat catcaccagc agcagcaaca gcaacatcat catcatcaac tttctcaaca 6481 tcagcaaata ctacattttt ggcctctggc attttatgtt cctcaccagg ctcatcagca 6541 tcatccatgt cgtcgtcatc actatcatcc aacaagactt tacatgtgcg cacccccgat 6601 caagttttaa agactgcagt taccttggca accctaagcg aaataaccac acagcgagaa 6661 ttgcaacaga aacaacaaca acagcagcag caacaagact tagcagctgc ggctgcctct 6721 aaacatatac tggtggtgcc ccaggtggca ccacgcaaaa tgtgtaccct gccttttaaa 6781 aagctgaatt ttgccaatgt agccaacaac actccaactc cttcacctct acccaacact 6841 gcctccagca ataatttctc atcagcatca tttgcagcag caacaaccac aaccataaca 6901 tcatcggttg cagctgctgc agcagcattg tgcaacatca attctgcaac atcagcaaac 6961 aacactgcta caaacacaac aacaacaact gcaattacac taaatactaa taaaaatcat 7021 ttcaatagtt ttttaggttc tatgaatatg aaaaacaaca gcaacagcaa caacaacaat 7081 aataataaca ttaatttatg caacaacatt aataataaca ataaccaaca ggcggcttct 7141 tctataatac agaaaactaa tcacaatacc agcagcaata atgtcctttt agcccccaac 7201 aacagtagca gcagcagtgg tgccctatgc cccatgcctc ttacacaaag cctaaagata 7261 ccctgcccca tgaagccaca attggttacc agccaaactc agaccgaaga tgtggccccc 7321 aaaaatgaag aggccaaatc tacgggtatg gccacttcgg ccatatgttt tgccaacaca 7381 accttttcca cgccccctac tacttccgcc tatagtaaca ctaacaatac gagtagcacc 7441 tcattagcat cttcattaca aacaacctct ctggctcagg ctggagcagg actgttaagg 7501 actgccgtgc caacgactca tagtaaaatg atgaacttgg cacaaaccgc atcaacattt 7561 tcatcaactg ccacaactac attatcatca gcacccactg gtattatggc ctctagcata 7621 agtaaagccc ccagctgctc gaagagccta aaagccccac caaactcttc tgtgctaaat 7681 gtttcgggta gcattttaaa gaactctttg acccagcccc taagtgggcc cacagataaa 7741 gccttggcta tggcaaatcc ccttttgaat aactacactg ccactaagac tcaaagggca 7801 tgcaacaacc ctacgacttc ctgcttgtcc agcacttcct catctacgtc tactgttaac 7861 tctcctgcta ccgctgttac tgttgttgtt tttgagacat tgttacctga ggactgaaaa 7921 ctttgtttat aaacgtaaat attttttgta gattttttac aaaccacccc caaacccccc 7981 aaccctcctt acaaaaaaaa aaaagcttgg ctcccttaaa ccccccccac cccttttagc 8041 ccctttgttg ttattccctc gccaatttgt tttgtaagtt ttattttttt tttacatata 8101 tataaataat tgtttcgctt tgcttttata tatacataca tacataaata ttatatattg 8161 tttattacaa cataaatatt ttttttatag accttaagtc aaaacttata taaacaattt 8221 ataaaaattg ttttaagttt tagggtagtt attatttttt tttttttttc taaatgtaat 8281 ttttatctta aatgtataat ttaaaaccta agaaaacatt ttttatatat ataaaaatct 8341 tatataaaat aaatttttat aatttttaag tcaaatgtcg taacctataa acactataca 8401 aaaattatgg actttttttt gtagcttaat gttttacatt ttaaataaga ttttattatg 8461 attactttag gcataaacaa tacaaaacaa aaaaaattat tattaattat tgctattttt 8521 taaatatttt ttaaaaacaa aaaaggaaaa caaaacaaaa aatcccaaat aatttttttt 8581 taatattatt ataaatatca ttattatgat ttaaaatgtt tagcttaaaa taatttgttt 8641 ttcttttagt tttttgtaat tttttgtttt ttttcttttg caaaagaatg taaacggatt 8701 atatatatgt atgtgtattt ttctgtgttt ttttttatta attgttataa ttaatcattt 8761 acaatttatc taaacataac tataaattaa acaaaaacca acaaacaaca aaaaattaat 8821 catttcattt tcaccaaaca cacacacaca cacacaaaca aacaaaagct tattatgcca 8881 acaaaactgg aaacaaaaca atcctaaaga aaaattaaaa ataaaacaaa gcaacaaaaa 8941 tcccctttaa ataaaaaacg tgttcaa